ZEB1-AS1

From LncRNAWiki
Jump to: navigation, search

Annotated Information

Approved Symbol

ZEB1-AS1

Approved Name

ZEB1 antisense RNA 1

Disease

hepatocellular carcinoma, esophageal squamous cell carcinoma"

Chromosome

10p11.22

RefSeq ID

NR_024284

OMIM ID

616915

Ensembl ID

ENSG00000237036

pubmed IDs

26073087, 26617942

Sequence

>gi|210147476|ref|NR_024284.1| Homo sapiens ZEB1 antisense RNA 1 (ZEB1-AS1), long non-coding RNA

000001 CTTACACCTA GAGGCTCTCG CTCTACGGCC GGAACCTTGT TGCTAGGGAC CGGGCGGTTT GCGGCAACCG TGGGCACTGC 000080
000081 TGAATTTGAA TTGAGGGGCG AGGGAAAAGT TTTCCTCAGG TGTGGTGGGG AGAGGGAGGC GGATGCCGGG AAACCGTAGG 000160
000161 GACGCGGTCA GAAAGGCGAC GGGCTGTCGG AGTTGGAAAG GGACGCCTGG TTTCCCCCCA AGCGAACCGG GATGGGAAGT 000240
000241 GACTTCAATG AGATTGAACT TCAGCTGGAT TGAAAGAGAG GCTAGAAGTT CCGCTTGCCA GCAGCCTCCT TAGTAGAGCG 000320
000321 GAATGAGTAA TACCCACACG GTGCTTGTCT CACTTCCCCA TCCGCACCCG GCCCTCACCT GCTGTCACCT CGGCCTCCCA 000400
000401 CACCCGGTCC GCGCTCCCCG CCCTCTTCCT CGCGTAGAAC CGTGGGATCC TAGGTGGCAG GACTCAGAGC TAAGGTATCC 000480
000481 ACAGGCCATG AATTCCTTCC TAAATGAGCG GTCATCGCCG TGCAGGACCT TAAGGCAAGA AGCATCGGCT GACAGATGTG 000560
000561 ATCTCTGAAC CTGATAGATT GCTGATTTTA TCTTATTTTA TCCTTGACTT GGTACAAGTT TTGGGATTTC TGAAAAGACC 000640
000641 ATACAGATAA CCACAAATAT CAAGAAAGTC GTCTTCAGTA TTAAGTAGAA TTTAGATTTA GGTTTCCTTC CTGCTTCCCA 000720
000721 CCTCCTTCGA ATAAGGAAAC GTCTTTGGGA CCAACTTTAT GGAATAAATA AGCTGAGCTG TATTTCAAGT AATATAGTTA 000800
000801 TAAATTAACA ATGTAGCAGT TATTGATAGA GAAATTGAGA AAACTGAAAC GTGACCGGAG TATTGGAAAT AACGTAGTAC 000880
000881 ATCACCTAGC ACAATGACAC ATAGTAGGTG CTCAATAAAT TTATGCTTAT AATTTTTGTC ACTTCTATGG CAGGATTTTT 000960
000961 TTATTAGGTT AAAATTATCT TTTAAACACC TTCCGGAATT TTAGAATATT CATTAATAAT GTCTTCAAAC CTTTCAACTG 001040
001041 AAATAAATTT ACAGCTGAAG TCTGATGATT TAAAGTTAGA AAGTTTAATC TTGAATATAA ATGAACATTT TCTCTCCCAC 001120
001121 ATTTTCTTGG GCATTTTGAG AAGTAAATGC GTTATTTATT GGTCCATGAA ATGTGACTGT AAATATTCTT TGCTATACAT 001200
001201 TATGTCTATA TATCTGCATT CATCCTCAAT GCCAAAACTA GAATCATTAG TCTTAATGAT CATTTTAAGT ACAGGCAGTC 001280
001281 CTCGCTTTCC TTGATACCAT GTTAACCGAA ACTTGTGTAT GTCAACACGG TGTCCTTGCT TTGCTTGGTT AAGTGTGAGT 001360
001361 TCTTCCTCCC TTTTTTTAAG AGTTGTACAA TGTTTTTCAG TCGCCTACCG AATCAGGTCA TAGACTATGG AATTGACCCC 001440
001441 ACCCCACCAA CATTTTTACA GCTACCCTGA TTTCTGACCA GAAAGGAAAA AAAAACTTTC CAGCTCTATC ACACATTTTA 001520
001521 CCTACTCTTA AACTTAGGAG GTATTACAAA TAGCATTTTC TCATGTTCTC TTTCTGGCCT GTACCTCCCT GCTAAGCTTC 001600
001601 CTTCAGTGTT CATCCTCACC TCATAGAGAG ATGAAGTGAA GAGACAAACA GAAGTCATTT TCTTCCTTAC TTTAGTGGTT 001680
001681 TCTGGTTTAG TTAGTTTGGG CCAAACTGTG GACAAGTACC TTTTCAGGTA ACTTTTTTTT CTTATTTCTA TGTCCTCAAC 001760
001761 ACCTAGTGGA GTACGTAGCC AATAGTAGAT GCTTAATAAA CATTTCTTAA ATTAATATTG TTGACCTTTT CTGACCCTGT 001840
001841 TCTTGACAGT AAGGTACATA ATCTGCCTTC ATCCCTTTAG TCCTTAGGAA CAGATAAAGT CATGGATATG AAAGTGATCA 001920
001921 CTGTCATTAA TATCCACATT AAAATTGCTC TTGATTTTAG TTTCTCCATA ATCATTTTCC CTAAACAATG AACTCTGTTC 002000
002001 ACCTTTTTTT TTAAAATATG CACAGTGAAT ATTACTGGTA GCCCAAATCT TCTAACATAA AATTTCCATT TTGTAAAAGC 002080
002081 TTCTGATAAG CATATATGTT ATGAATTGAA TGTTTGATTA TTATACTTTA ATATTCTTGA AAATATTGAT ACCTGGACTG 002160
002161 GAAAGAAAAC AGACAAAAGT AAATCTCAGA ATAAATTACT GCTTTAAACA TGAAAAAAAA AAAAAAAAAA AA

Predicted Small Protein

Name ZEB1-AS1_smProtein_1901:1990
Length 29
Molecular weight 3376.1235
Aromaticity 0.103448275862
Instability index 47.624137931
Isoelectric point 8.27557373047
Runs 6
Runs residual 0.0073275862069
Runs probability 0.0421598068658
Amino acid sequence MDMKVITVINIHIKIALDFSFSIIIFPKQ
Secondary structure LLLEEEEEEHHHHHHHHLLLLEEEEELLL
PRMN LLLLLLHHHHHHHHHHHHHHHHHHLLLLL
PiMo ooooooTTTTTTTTTTTTTTTTTTiiiii

Navigation menu

Internal error - LncRNAWiki

Internal error

Jump to: navigation, search
[Xe1H8TOkl54b2I1hFkn@YwAAAAo] 2019-12-08 18:59:00: Fatal exception of type "TypeError"

Navigation menu