SPATA3-AS1

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Annotated Information

Approved Symbol

SPATA3-AS1

Approved Name

SPATA3 antisense RNA 1 (head to head)

Previous Symbols

_

Synonyms

_

Chromosome

2q37.1

RefSeq ID

NR_033879

OMIM ID

_

Ensembl ID

ENSG00000238062

pubmed IDs

12477932

Sequence

>gi|299829179|ref|NR_033879.1| Homo sapiens SPATA3 antisense RNA 1 (head to head) (SPATA3-AS1), long non-coding RNA

000001 AGTCTTCTCT GCAGACACCA GCCTGGTGTC CTCCTTCATC CCAGGCTGCC AGGCTAGGCA GGGGACAGCG GCTGCCCTGG 000080
000081 TCCTCACAGC CCTGGCTACG GGGCTGGTGA CAGCCAGATC CTCATGCTTC TGCGACCTGA GCGCTGCCTT CAGACACCTC 000160
000161 TCTGCTGGCG TGTTCCTGGG TCCATGATGG AAGAAGGAAA AGTATTTTTA AAAGACAATC TGAAGCTCAT ACTGTGACTG 000240
000241 CAACATAAAA TGTGTTCACC TGAGGAGACT GCTTTCATCG CCAGTGTGTC ACAGATGGTG GAAACCTCAG AAGGCCACAG 000320
000321 TCCAGAGTAG GGGCTTAATG CAAGCTGCTG GAACTGAATA AAGCTGACTT CTCTGAGCTG GATGGCACCC TGGACATCAA 000400
000401 CCAGCCCTTC ACCTTCACGT CACACAGGAG GGACACTGGT CCATAGAGAG GATGCCTGCT CTGGTCACCA GCTGGAGAGT 000480
000481 GGCAGACCTT GGGTACCTGA CCTTTGGACT CTGCCACACA GAGCACTTCC TCAGTCCCTC CTGCTGCCCC TGGCAGGGTG 000560
000561 GAGCTGGCAG GGCAGCTGAT CCAGGACCGT CCACTTCCAA GCCAGCAGGA GGATGGAAAA GCAGAATGGA GGGGAAACAA 000640
000641 CCTCCTTTGC AGGGCGTGAC TCGGAAGTTG GACACATCAT TTCCAGCCAC ATTCCATGGA CCAGAATTAG CCCTGTGACC 000720
000721 AACTCTGGCT GCCAGAAAAT CTGGGAAATA CAGTCTCTGC TTGGGCGATC AGGCAGGCAG TTATATCTTT GGGAACATCT 000800
000801 CTCACCCCCT GGGAACACCT GAGCAGAAAC TGAAGGACAT TTAACAGATT CTCCTTTGTG TCTAATAAGA ATTGCCCCCA 000880
000881 TCAGTCGGGG CTGTCCTAGG TGCTGGGTAC ATAGGTCATC TATACACAAC CCAGCAATGG AGAGCACACC ATTCCCAGGC 000960
000961 TGCAGATGCA GAAACTGTGG CTCGGAGAGT TAAGCGTCTT GTTCAGATTC AGTCAGCTGG TAGATGGCAG GTCTGGGATT 001040
001041 GAGACCCAGG CCTGGCTGGT CCTGCCAGGA CACAGTATCA CAGCTTTGAC TGGGAGCTTC TTTTTGTTTA CATATATTTT 001120
001121 TTATGCTCAA TGTGCATTCC TTTTGAAATA CACAGAAAAG GGAAAGAAGC CGGAGTCCTG CCTTGTGTAG GAGGGATAAG 001200
001201 TTAGAGGTGT GCACCGGGAT AAATCTGCCT CCCGCGCTGG CCCTGGCCCT GGCCCTGGCC CTGGCCCTGG CCCTGATCCT 001280
001281 GCTCCTGATT CTGGTCCTTG GGGCCTGGGC GGCGATTCCC GGCGCTGGCT GAGCGTCACC GGCCACCAGA GGGCGCTGCC 001360
001361 GGGCTACCGG TCCGGTCGCC CGGGGATCAC AGCCTCAGCG GACAGGAAAT GATCAACAGC TTCTCCTCTC GGATCCACGT 001440
001441 GGACTCAAGG AATCTCCGGG GGGCAGGACA GGTGCAGAGC CGAGTGCAAA GGTGGAATTC TATTCCCAAA GCACATCCCG 001520
001521 CGCCCCTTTC CTCTGCAAAG TCCCGGAACC GCGTGACTCC GGATGAGTTA TCGGGGCTGG AACCGAGGGT TCAGCCCCCT 001600
001601 GCGCCTCTGT GTGTCCCGGT CCCTTTCCTC CAAGTAGACA GGAGGCATCT CCTCATCGGC TCAGTTCACA TTCCTCCAGG 001680
001681 GGCTCAAAGG GGACCCAGTC CCTGTCTTGG GACACCAAGT CAGGCAGACT CCAGGAGAGA GGAAGGAAGA TGATTCCCGC 001760
001761 GCTCAGGTGG GCGGGTCCTG CTCCCTCTGT TGAAGACCTG AAGACAAAGA TTGACCCTCA CCCTTCACCT CCCACCTCTT 001840
001841 CCTCACCTTG GAAAAGAAAA ACATTCCTGA GAGGGGGGAT TTGTCAGCAG AAGGCTTTGG GACTAGAACT GCAGCATCAG 001920
001921 CTCTTCCTGG TTCCCCAGCG CCCAGGCCTA CCCTGCAGAT GTGGGCTTAC TGGCCTCCAC GATCAGTGAG CCGGTTCCTT 002000
002001 AAAATCAACC TCTCTCTCTT CCTCTGTCTC TCCCTCTCTC TCTCTCCCTG TCCACATCCC ATTGGTTCTG TTTCTCTGGG 002080
002081 GAAACCTGAC TAATAAGGGG ACTCTCAAGG CCCTGGCTGA GGATGGCAGG CCTGAAGATT CTCTGAGGCA TTCAGCATTG 002160
002161 AATGAGCACC AGCTGGGCGT GGAGCTGTGT CAGGCGCTGG GCACAGGACT CAGCCCCGGA ACCAAGTGTG GGCCCACATG 002240
002241 GTGTGGGCCT TTGTCTGTCC CTGTCATGGC TTTGGACACA CGCGTGGCCC AGAGGGGACA ACGGATCTGG GTGGCGAGGT 002320
002321 GGGAAAGCTC ACCCCAGTAT TCCTCTTGGT GGCAGCAGTC CCTTAAGGGG TCGCCTGAGT CGTGAGACCC ACAGGTGTGG 002400
002401 ACCTCCCCCC CCCCTTCCTC CCCTCTCCCC CAGTGACTTT ATCCAGCACC TGCCCTGCCC AGCCTTGCAC AGGTTACCCT 002480
002481 GTGACCCACT CACAGGGAGA TAGGGCAGCT TCTTTCTGCC CTCAGGAGCC TTGTTCTCAA GGCAGCTCAT CCAAGAGAAT 002560
002561 AACATACAGT AGATTGCCAC ACACATGACT GTGGCTTAGT CCAGGAAAGC CACTTATAAA ATCCGGAGGT GAAGGAAGAA 002640
002641 AAGATTGAAA TCTCTGTAAC AAATCCATTT CCCTCCTCCC TCCCTCCCTT CATCTCCAAA GTAGACCTGC CCCAGGGCCA 002720
002721 GGGATCCTCT CCCTGCAAGG CTAGGTAACA AGCGGATTTT TGCTTTTGAG CTTCAAGGTC CTGGCTTCTG GTGGTTTATA 002800
002801 GGTGATCTTT GAGGGTGGTT TTGACGAGAG GCTTGTTAGC TTCTCTACGC TTTTGAAACG CCCACTCTCC CCACAAGAAT 002880
002881 CTGGGACTTT GCAGAACCGG TCCAAGGTGA GAGTAGGATT AATTGCCAAA TGAGTTTTCT CATAAGCCTG GGGTCCAAAG 002960
002961 TACATTGGAC AGCCAGCAAA TGCTTATGAG GGGTTTGAAC AAGTGAAATC AAGGCTCAAG GTCATAGGAC TCAATGGAGA 003040
003041 GTGAGGCAGC TGGGATCTGG GATGACCGGC ATGGGCCTCA AAGCAGGGGG CTTGGAAATA GGCCCTGAAG AGGGGGTCGC 003120
003121 TTGCGTGGCT AGGAAGGGGT TGGGGCCCAC TAGCATTTCT CAGAATGCCT ATTTTCTTCG GCAGTGAGAG CTGGAGGGAG 003200
003201 GGATGGGTTT CTCAGCACAG TTCCAGTATG AGTGGCTGTC ACCACAGGGC GCCATTGCCA AGTCAGAAAG AAACAAAGCT 003280
003281 TAACCGCTGC CTCCTGTCCC CCATGGTCTG TGAAAGTCTC ATACTGTAGT GCGTCTAATG GTGGCCCCCC AAAAGATACA 003360
003361 TCTACATTAT AATTCCTGGG ACCCAGAAAT GTGACCTTAT TTGGAAAAAG GGTCTTTGAC CTTATTTGGA AAAAGCGTCT 003440
003441 TTACAAATGT AAGTGACCTT ATTTGGAAAA AGTGTCTTTA CAAATGTAAT TTACAACATT GAATGAGCAA AAAAAAAAAA 003520
003521 AAAAAA

Predicted Small Protein

Name SPATA3-AS1_smProtein_965:1189
Length 74
Molecular weight 8424.8066
Aromaticity 0.162162162162
Instability index 40.492027027
Isoelectric point 8.68475341797
Runs 14
Runs residual 0.046539222149
Runs probability 0.0387172887174
Amino acid sequence MQKLWLGELSVLFRFSQLVDGRSGIETQAWLVLPGHSITALTGSFFLFTYIFYAQCAFLL
KYTEKGKKPESCLV
Secondary structure LLLEEELLLEEEEEHHHEELLLLLHHHHHEEELLLLLHHHHLLHHHHHHHHHHHHHHHHH
HHHHLLLLLLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLL
LLLLLLLLLLLLLL
PiMo oooooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTiiii
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