NONHSAT132864

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT132864

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1064 nt

Genomic location

chr9+:90272331..90283863

Exon number

2

Exons

90272331..90273042,90283512..90283863

Genome context

Sequence
000001 cccccgctgt gagagacatg atgtcatgga aggcagggtg gtgcagtcta atgatgacac tctgcacctc ttcaagcgag 000080
000081 tagttcacct ggtctcagaa ccatgtttct tatcaaaaac tttagatatt cctgggcacc cctatgaatt cagtacagtt 000160
000161 ccctgggtta ccttggcaca caatttggga accATAGGCA CAAACAAGGC TTATGGGCTT GTCCTGGTAT TTTCACTAAT 000240
000241 TAGGATGTCT TCAATATCTG TCTTCCATGT CTTCTTCCCT GGCTGTGTCT AAATTTGAAC TATGGTGCAG ATCTTGCTGG 000320
000321 AACTCTGGAC CTTGAGCCCT TGACTCCTGT CTCTTTCAGG CCAGCACAGC AGGAAACTTA CTTAAGTTAT CTTTGAAGTT 000400
000401 GTATTTTGAA GCTCCTCTTT TAATTGCAAA GTACTTGGAA AGGTTCTGCC TGGCTGGCCT GCCCCAGTGG AGAGCAAGTT 000480
000481 TCAGGAGAAG GGAGATGGCT CCTTCCTCCT TTCTGGTGGG CCCTGACCCC TTCCTTAACC TTGTGTCTCC GGAATGTCAT 000560
000561 CCTCAGCAAC TGCGTGAGAA GAACGACCTT TGGCCTTTTT TCTCTCTTCC CAGTATGGGC GAACGCCTCT GCACCTTGCG 000640
000641 GCCAACAACG GAATCCTAGA CGTGGTCCGG TATCTCTGTC TGATGGGAGC CAGCGTTGAG GCGCTGACCA CGGACGGAAA 000720
000721 GACGGCAGAA GATCTTGCTA GATCGGAACA GCACGAGCAC GTAGCAGGTC TCCTTGCAAG ACTTCGAAAG GTGAGAAGTT 000800
000801 CTGTTATAGG TCTGAAGTTC TCTACCTGTG TTTATGTGAA AAAGTCTCAG TCTTTTTCCT TATTTGAGAA TGAGCAAAAT 000880
000881 GAGGCTCTAG ACAGCCAGGT TTTAGGAACA GTGGTCCCTG TCCTGTGGTT TACATGTCAG TCGGTATAAA TGCATCAGCT 000960
000961 CCCTATCTGT TTTCTTCTCT ATTTGGACTT GGAAATCATT TAGCATGTTT GCAGTTGCCG TGCCTGGTTT TCCTTCTCCC 001040
001041 ACTCTCTCTA TAATAAACCA CTCC
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Predicted Small Protein

Name NONHSAT132864_smProtein_494:658
Length 55
Molecular weight 6117.9617
Aromaticity 0.0925925925926
Instability index 93.087037037
Isoelectric point 5.00457763672
Runs 7
Runs residual 0.0330623306233
Runs probability 0.0465591642063
Amino acid sequence MAPSSFLVGPDPFLNLVSPECHPQQLREKNDLWPFFSLPSMGERLCTLRPTTES
Secondary structure LLLLLEEELLLLLLLLLLLLLLLHHHHHLLLLLLEELLLLLLLLLLLLLLLLLL
PRMN -
PiMo -