Difference between pages "LINC00973" and "CEP83-AS1"

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==Annotation==
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==Annotated Information==
 
===Name===
 
===Name===
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Approved symbol: LINC00973
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Approved symbol: CEP83-DT
  
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Approved name: long intergenic non-protein coding RNA 973
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Approved name: CEP83 divergent transcript
  
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HGNC ID: HGNC:48868
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HGNC ID: HGNC:27055
  
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Alias symbols: CTD-2021J15.2
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Previous symbols: CCDC41-AS1; CEP83-AS1
  
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LncBook ID: [https://bigd.big.ac.cn/lncbook/transcript?transid=HSALNT0289076 HSALNT0289076]
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Previous names: CCDC41 antisense RNA 1 (head to head); CEP83 antisense RNA 1 (head to head)
  
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===Disease===
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RefSeq ID: NR_027035
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Disease: colorectal cancer [http://www.ncbi.nlm.nih.gov/pubmed/28796819 (PMID:28796819)]
 
  
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Dysfunction type: NA
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Ensembl ID: ENSG00000278916
  
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Description: NA
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LncBook ID: [https://bigd.big.ac.cn/lncbook/transcript?transid=HSALNT0289466 HSALNT0289466]
  
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===Function===
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===Sequence===
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Function Mechanism: NA [http://www.ncbi.nlm.nih.gov/pubmed/28796819 (PMID:28796819)]
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>gi|224451005|ref|NR_027035.1| Homo sapiens CEP83 antisense RNA 1 (head to head) (CEP83-AS1), long non-coding RNA
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<dnaseq>ACCCACGCCACCGACGCCGGTTGCTGCCGGAGCCGTTAGAGGGAGGAGACAAACGAACCGAGGCGGGAGCGGCCACGGGTGACAGCGGCAGCGGCGGGGCCGGGCTGCGCTCCCGAAGGCGTTCCTGGAGGGCCCTGGGATGGACTCAGAGATCCCCAGAGCCCCAGGGGACGGAAAATCTAGCCCCGGGCACTTGCCTTGGAGTCTGAGTGATGCGCGTCGTTGGAGCGCGAAGCCGGTCTCCCTAGCCTCCGCCCGACACAGCGTCTCCAGGGGTTTTCCTCCTTTTCGCGCCTCTCCTTCCCTCTTCCCCACACCATTTGAGAGCCTCAAATGGTAGTCCTGCCGCCACCTCTCTCCCTTCGCCAGCCTGCCATCGTCCCCATGGGTGCAGATATGCGCTCCCGAAGCCGCCTGCCTGCCGCGTCTGCCTCGGGCATCAGCCCACGAGTGGGGAGTCGGCTCAGCTTGCCACGAGGGAACCTCGGGTTAGGACCAATCGCCCGGGAGAGAGCCCTCCTCGCCCCCGCACCTCCTGCTCCAAGTCTCCTGTCCTGGTTATCCCAAGTTCAGGGCCCACCTGGGGTCACATGGGGAACTACTTGTCTTAAGGCTGTAAACAATAGTTGGAAGAGGAGTTGCTAGCTTTTGAGAACTTCCATGATCATCCAAAGTCTGAAACAAAGTAGGCGGTCAGCCTTTCAAAATACGTGTTGGAAGAAACAGACACCTTCCCATCCCCAGCGTTTGTTCAGTGCCTTGGTTGGGCTTTGATTCTCACTGCTTTGTGAAGTACAGCTTATTTTTACCCCCAAGATTATGATTTTCAGGCTGTAGTTATTATTGGACAACTGAGAGGTGATTTTGTTGTTGTTGAAATGAGGGAAAACGGGCCATTAGAAAGGACCGTGTCTCTTAAGAGGAGGGAAAAAAAGGACAGCGAGTTGGTAATGGAATGTTGCTGGATGGATTACATAGATGAGACATGGGAGATAGAATAGAGAATCCAGAAATTCTCATGTATGTGTGCGTGTTTAGTATAATAACAGTAGCTCACATTTGCTGAGCATTTGTGTGGCAAGTACTGGAGTACTTTTTCAGGTTATCTTATTTAACTCTAACATTTCTGTAAGGTAGGTGCAATTGTTATCTCCATTTCACAGAGTTGCCCAAAACCATTACTTTTAAACGCTGGAGCCAGACAACTCCAGAAATCTCTGTGGTAGCCAGTAAACTATACATGACAAATTATTGGTCAGTAGGAAAAAGATCATTCGGGAAATGGCGGTGGCTCACGCCTGTAATCCCAGCACGCTGGGAGGCCAAGGCAGGTGGATCACCTGAGGTCAGGAGTTCGAGACGACCCTGGCCAACATGGTGAAATCCCATCTATTAAAAATACAAAAAGCCAAGAAAAACAAATATTCAATTAACAAACGGAAAGTTGTCCCACTTCCAAACAGTTGTTTTTTGTCTATCATTGTTGATAGGGGTGTGGGATACAATTACTGTCAGGCATTTTTGGTGTGAAGGTGAAATTGGTACAACCCTATTTACCAAAATTTAACATATGCATTAGCCTTTGCCCCACAGCTGTCTCATTTCCGAGGCATATACCCTAAGGAAAATAAGGGATTCATAAGGATACTATTTGCCACCTTTTTTAAAAATAATGCTTCTAGAAACAAGTGTCCATCACTAGGACACTAGTTAAGAAAATTATGATTGGTACATGCAATGGAATACTCTTGACCCATTAAAAACTGATGGAAAGTTCTTTATTTGCATTAAAGTATGTCCAAAAAATATAGTTTCCCCTCAGGAAAAAAAAAGCAGAATGTAGTTTAGCAAGTACAGTGCTGTCCTAATGTGAATATATGTGTGTACATATGTTAATATAAGTGTACAAAAATATCTGGAAGAAGGTCAGTCAAAATACAAGTGTTTTACATTTTGTCTTTTGGACTTTTTATCTGGTTGGTGTTTTTTGTAATTTATTATTTTACAAAAACAAAGTTGTGTTTTATGTTTTAATTAAAGCTGTGCCAGTGAAAAGGGAGCCAGTTGACTCTTGACCTTCACAAGTAGGTAACCATGATGAAGTAACTATGTCTGGGGATCTGAGTCTCAGCTTTTTTGTGTCTATAAATTTGATTATATTCATTTACCTATAGTTGGACAAGCTAACCTACCACCTGGACATCATAGTTTTGACTCCCCAAATTGGACTGGGTATCCATTCTATGTGTTCTCTGTGTGCCTGTCATGGTATTTGTCACACTGTACTGTAATTCCCTCTGTGCCAGTAGATTGTTTGCTCCTGCCATACATATACACATGCACATACATACTTTTTCTGCTATATGTTACACATTTCTTTTGATTTATTATTTGTCATCTACATTTGTATACAGAAGTTTTAATTTTCATTAGCCAAAATGCTAATGAAATCACATAGATATTAAAGGGATACTTGGAACAACTTTATGCCAATAAATTCAGTAACTTAAGCAAAATGGACAAATTCCTAAAAAAATAAATAAATAAATTACCAAAAATGACACAAAA</dnaseq>
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Biological Process: pathogenic process
 
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Description: NA
 
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===Characteristics ===
 
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[[File:Functional domains of 7SK RNA..png|right|thumb|Functional domains of 7SK RNA([https://www.ncbi.nlm.nih.gov/pubmed/19246988 (Diribarne 2009)])]]
 
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===Expression===
 
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===Regulation===
 
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===Function===
 
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[[File:Model of hLarp7 recognition of the 7SK.png|right|thumb|Model of hLarp7 recognition of the 7SK 3′end and mechanism of assembly of core 7SK RNP([https://www.ncbi.nlm.nih.gov/pubmed/29946027 (Eichhorn 2018)])]]
 
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===Disease===
 
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colon adenocarcinoma <ref name="ref1" />
 
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===Evolution===
 
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Please input evolution information here.
 
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==Labs working on this lncRNA==
 
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Please input related labs here.
 
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==References==
 
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<references>
 
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<ref name="ref1"> Diao R, Mu X, Wang T, et al. Risk score based on ten lncRNA-mRNA expression predicts the survival of stage II-III colorectal carcinoma[J]. PLoS One, 2017, 12: e0182908.
 
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</ref>(1)
 
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</references>
 

Latest revision as of 13:06, 12 August 2019

Annotated Information

Name

Approved symbol: CEP83-DT

Approved name: CEP83 divergent transcript

HGNC ID: HGNC:27055

Previous symbols: CCDC41-AS1; CEP83-AS1

Previous names: CCDC41 antisense RNA 1 (head to head); CEP83 antisense RNA 1 (head to head)

RefSeq ID: NR_027035

Ensembl ID: ENSG00000278916

LncBook ID: HSALNT0289466

Sequence

>gi|224451005|ref|NR_027035.1| Homo sapiens CEP83 antisense RNA 1 (head to head) (CEP83-AS1), long non-coding RNA

000001 ACCCACGCCA CCGACGCCGG TTGCTGCCGG AGCCGTTAGA GGGAGGAGAC AAACGAACCG AGGCGGGAGC GGCCACGGGT 000080
000081 GACAGCGGCA GCGGCGGGGC CGGGCTGCGC TCCCGAAGGC GTTCCTGGAG GGCCCTGGGA TGGACTCAGA GATCCCCAGA 000160
000161 GCCCCAGGGG ACGGAAAATC TAGCCCCGGG CACTTGCCTT GGAGTCTGAG TGATGCGCGT CGTTGGAGCG CGAAGCCGGT 000240
000241 CTCCCTAGCC TCCGCCCGAC ACAGCGTCTC CAGGGGTTTT CCTCCTTTTC GCGCCTCTCC TTCCCTCTTC CCCACACCAT 000320
000321 TTGAGAGCCT CAAATGGTAG TCCTGCCGCC ACCTCTCTCC CTTCGCCAGC CTGCCATCGT CCCCATGGGT GCAGATATGC 000400
000401 GCTCCCGAAG CCGCCTGCCT GCCGCGTCTG CCTCGGGCAT CAGCCCACGA GTGGGGAGTC GGCTCAGCTT GCCACGAGGG 000480
000481 AACCTCGGGT TAGGACCAAT CGCCCGGGAG AGAGCCCTCC TCGCCCCCGC ACCTCCTGCT CCAAGTCTCC TGTCCTGGTT 000560
000561 ATCCCAAGTT CAGGGCCCAC CTGGGGTCAC ATGGGGAACT ACTTGTCTTA AGGCTGTAAA CAATAGTTGG AAGAGGAGTT 000640
000641 GCTAGCTTTT GAGAACTTCC ATGATCATCC AAAGTCTGAA ACAAAGTAGG CGGTCAGCCT TTCAAAATAC GTGTTGGAAG 000720
000721 AAACAGACAC CTTCCCATCC CCAGCGTTTG TTCAGTGCCT TGGTTGGGCT TTGATTCTCA CTGCTTTGTG AAGTACAGCT 000800
000801 TATTTTTACC CCCAAGATTA TGATTTTCAG GCTGTAGTTA TTATTGGACA ACTGAGAGGT GATTTTGTTG TTGTTGAAAT 000880
000881 GAGGGAAAAC GGGCCATTAG AAAGGACCGT GTCTCTTAAG AGGAGGGAAA AAAAGGACAG CGAGTTGGTA ATGGAATGTT 000960
000961 GCTGGATGGA TTACATAGAT GAGACATGGG AGATAGAATA GAGAATCCAG AAATTCTCAT GTATGTGTGC GTGTTTAGTA 001040
001041 TAATAACAGT AGCTCACATT TGCTGAGCAT TTGTGTGGCA AGTACTGGAG TACTTTTTCA GGTTATCTTA TTTAACTCTA 001120
001121 ACATTTCTGT AAGGTAGGTG CAATTGTTAT CTCCATTTCA CAGAGTTGCC CAAAACCATT ACTTTTAAAC GCTGGAGCCA 001200
001201 GACAACTCCA GAAATCTCTG TGGTAGCCAG TAAACTATAC ATGACAAATT ATTGGTCAGT AGGAAAAAGA TCATTCGGGA 001280
001281 AATGGCGGTG GCTCACGCCT GTAATCCCAG CACGCTGGGA GGCCAAGGCA GGTGGATCAC CTGAGGTCAG GAGTTCGAGA 001360
001361 CGACCCTGGC CAACATGGTG AAATCCCATC TATTAAAAAT ACAAAAAGCC AAGAAAAACA AATATTCAAT TAACAAACGG 001440
001441 AAAGTTGTCC CACTTCCAAA CAGTTGTTTT TTGTCTATCA TTGTTGATAG GGGTGTGGGA TACAATTACT GTCAGGCATT 001520
001521 TTTGGTGTGA AGGTGAAATT GGTACAACCC TATTTACCAA AATTTAACAT ATGCATTAGC CTTTGCCCCA CAGCTGTCTC 001600
001601 ATTTCCGAGG CATATACCCT AAGGAAAATA AGGGATTCAT AAGGATACTA TTTGCCACCT TTTTTAAAAA TAATGCTTCT 001680
001681 AGAAACAAGT GTCCATCACT AGGACACTAG TTAAGAAAAT TATGATTGGT ACATGCAATG GAATACTCTT GACCCATTAA 001760
001761 AAACTGATGG AAAGTTCTTT ATTTGCATTA AAGTATGTCC AAAAAATATA GTTTCCCCTC AGGAAAAAAA AAGCAGAATG 001840
001841 TAGTTTAGCA AGTACAGTGC TGTCCTAATG TGAATATATG TGTGTACATA TGTTAATATA AGTGTACAAA AATATCTGGA 001920
001921 AGAAGGTCAG TCAAAATACA AGTGTTTTAC ATTTTGTCTT TTGGACTTTT TATCTGGTTG GTGTTTTTTG TAATTTATTA 002000
002001 TTTTACAAAA ACAAAGTTGT GTTTTATGTT TTAATTAAAG CTGTGCCAGT GAAAAGGGAG CCAGTTGACT CTTGACCTTC 002080
002081 ACAAGTAGGT AACCATGATG AAGTAACTAT GTCTGGGGAT CTGAGTCTCA GCTTTTTTGT GTCTATAAAT TTGATTATAT 002160
002161 TCATTTACCT ATAGTTGGAC AAGCTAACCT ACCACCTGGA CATCATAGTT TTGACTCCCC AAATTGGACT GGGTATCCAT 002240
002241 TCTATGTGTT CTCTGTGTGC CTGTCATGGT ATTTGTCACA CTGTACTGTA ATTCCCTCTG TGCCAGTAGA TTGTTTGCTC 002320
002321 CTGCCATACA TATACACATG CACATACATA CTTTTTCTGC TATATGTTAC ACATTTCTTT TGATTTATTA TTTGTCATCT 002400
002401 ACATTTGTAT ACAGAAGTTT TAATTTTCAT TAGCCAAAAT GCTAATGAAA TCACATAGAT ATTAAAGGGA TACTTGGAAC 002480
002481 AACTTTATGC CAATAAATTC AGTAACTTAA GCAAAATGGA CAAATTCCTA AAAAAATAAA TAAATAAATT ACCAAAAATG 002560
002561 ACACAAAA
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