Difference between pages "CARD8-AS1" and "SNHG15"

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==Annotated Information==
 
==Annotated Information==
[[File:A.png|right|thumb|400px|'''CARD8-AS1 shRNA Lentivirus Suppresses Glioma Cell Proliferation and Migration and Induces Apoptosis In Vitro''' <ref name="ref1" />.]]
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===Name===
Approved Symbol:CARD8-AS1
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Approved symbol: SNHG15
  
Approved Name:CARD8 antisense RNA 1
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Approved name: small nucleolar RNA host gene 15
  
Synonyms:LOC100505812
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HGNC ID: HGNC:27797
  
Alias:LOC100505812; AC008392.1
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Previous symbols:C7orf40
  
RefSeq ID:NR_040599
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Previous names: chromosome 7 open reading frame 40; small nucleolar RNA host gene 15 (non-protein coding)
  
HGNC ID:51408
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Alias symbols: FLJ38860; MYO1GUT; Linc-Myo1g
  
Ensembl ID:ENSG00000268001
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Alias names: MYO1G upstream transcript
  
LncBook ID: [https://bigd.big.ac.cn/lncbook/gene?geneid=HSALNG0126842 HSALNG0126842]
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RefSeq ID: NR_003697
  
===Characteristic===
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Ensembl ID: ENSG00000232956
CARD8-AS1 is located on 19q13.33
 
  
===Disease===
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LncBook ID: [https://bigd.big.ac.cn/lncbook/transcript?transid=HSALNT0289249 HSALNT0289249]
Glioma <ref name="ref1" />.
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===Chromosome===
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7p13
  
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===Characteristics ===
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Please input characteristics information here.
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===Expression===
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Please input expression information here.
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===Regulation===
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Please input regulation information here.
 
===Function===
 
===Function===
CARD8-AS1 regulates the metastatic potential of glioma cell lines in vitro, which compared with control groups, lower CARD8-AS1 treatment reduce the number of migrations in U251 and A172 cells <ref name="ref1" />.
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Please input function information here.
 
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===Disease===
===Sequence===
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Please input disease information here.
>gi|341926197|ref|NR_040599.1| Homo sapiens CARD8 antisense RNA 1 (CARD8-AS1), long non-coding RNA
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===Evolution===
<dnaseq>ACTTTGTCGTACTCCTTCCTTGCTGACTAAGAGGAACAGAACACAGAGCAGCCTGGCGGTGTCCTACCAACAAGCCTCCGTTTCTCCTTCCTGTACACTAGGGCTCCTGAAACTCACCTGATGAAGTCTCCGTCTGTCACCCAGGCTGGAGTGTAATGGAGCAATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTCTTGCCTCAGCCTCCCGAGTAGCTGGAATTATAGGTGCATGCCACCACGCTCGGCTAATTTTTTGTATTTTTAGTAAAGACGGAGTTTCACCATGTTGGTCAGGATGGTCTCCGTCTCTTGACCTCGAGATCAGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGTGCCCGGCCTTGGTTTCTAAATACTATTTTGAAGTATCTGTGGAGAAATGGTTACTTCGAGGGCTGGGGCAGGAATATATAAGATAACATTGGAACAAATTCTGACGCCAGAACATGAAGAAATATTTGAAAAAGGATGGGGCATATTGACTGAACACAGAAGACAAACATGCATGACCTCAGCCTAATCGTGAGAAAACATCAAAGAAATCCAAATTGATAAACATTCTGTAAAATAATTGGCCATGCTCAGCAAAAGTGTCACAATCACAAAAGACAAGGGAAGAATAAGAAACGGTCACAGCCTGGAGGAATCTAAGGACATAACAACTGAGTGCAATGTGAGATCCTCGATTCGATCTTGGAGAAGAAAGAGGACGTTAAGAGAAATATTGACAAAATTCAAATAAGGTCTGCACATTAGGTAATGGTAAGATACGTTGACATCAATTTCCTGGTTGGATACTTGTATTACATATACTATTATGTATATAATTATTATATTACAATTACATATACAGTTGTATATTATATATAATACAATAAATGTATATATATGATTATAATACAATAAATGTATATATACAGTTTTATATATAACAACTATTATACATATAATACAATTATATATATAGCTAACATCAGGATAGGCTGGTTGAGGATTTATATGAATCTTTGCTAATTTTGCATGTTTAAAATTATTTCAACATAAAAAAATTATATGGGTCATGTAGTTTTTTGTGCAGTTTAATTCTAGGCACCATAGTTTCTGTTTTAATGGGTGTATTTTCTTCTTTCAAGGAATTGGGATAGTCTGTTGTATTAAAAACCTATTCATTTTTGTACATTAAGATTCTTCTGGCCAGGCGCAATGGCTCAAGCCTATAATCCCAGCACTTGGGAACCTGAGGCAGGCAGATCACCTGAGGTCAGGAGTTCAAGACCAGCATGTCCAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAAAAATTAGCCAGGCATGGTGGCACATGCCTGTAATCCCAGCTACTTGGGAGGCTGAGGAGGAGACTCACTAGAACTCAGGAAGCAGAGGTTGCAGTGAGCCAAGACTGCGCCACTGCACTCTGGCCTAAGCAACAGAGGGAGACTCCATCTCAAAAAAAAAAAAAGATTATTTCTCTAACTTACTGGTTTATCTTTTATAGCTTATTTCAGGTGATTTGTTGTGTTTGTCTATAGAGTAAAATAACATGTCTAATGAGTTATAATTTAATGTCCTTCCATTCAATCACTGTATTTCAAATTTATTCCAATATTTTGGAATAAGCTTCCAATATTTTAACTTAAATAGGGAAGGTCATACTTGGTATTTTCCTGACCTCAGCTGGAATGCCTTCATAGTGTTCACATGAACACATTTGGCCTGAGAGAGACTTATTATGCCGAGAATGTGTGTAACCCTTTTTACTTAGGAATTGTGGGTGGAGTTTTTCCCCCCGCCCAAGAATGATTGTTAATTTCCGTCCATCATTTTCCTTTGATTGTTCTTCATCTCGAAAACAAATAATAAAATAATAAAATAAATAAAAAAAAAAAAAAAAAAAAAAA</dnaseq>
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Please input evolution information here.
  
 
==Labs working on this lncRNA==
 
==Labs working on this lncRNA==
* College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, Heilongjiang 150081, China.<ref name="ref1" />.
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Please input related labs here.
  
 
==References==
 
==References==
 
<references>
 
<references>
<ref name="ref1"> Lin X, Jiang T, Bai J, Li J, Wang T, Xiao J, Tian Y, Jin X, Shao T, Xu J, Chen
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</ref>(1)
L, Wang L, Li Y. Characterization of Transcriptome Transition Associates Long
 
Noncoding RNAs with Glioma Progression. Mol Ther Nucleic Acids. 2018 Dec
 
7;13:620-632. doi: 10.1016/j.omtn.2018.10.009. Epub 2018 Oct 24. PubMed PMID:
 
30472640; PubMed Central PMCID: PMC6251785</ref>(1)
 
 
</references>
 
</references>
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===Sequence===
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>gi|154937378|ref|NR_003697.1| Homo sapiens small nucleolar RNA host gene 15 (SNHG15), long non-coding RNA
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<dnaseq>GCGCGGCGTCAGGCTTGGCTGGCAGACCTGTACTCCGTACTCCGTACTTCGTAGTCGCAGCGGCGCGGTCTTCGGCAGTTTAGTCATCCACCGCCATCCTGGGCCCCACGTGTTGCCTGACCATTCCTGAGCCCAGGTGGGAGCCGTGGCTGAGGTGACGGTCTCAAAGTGGAAGAGCTTACTGTCACAGCAACTCCTTTGCAAGATGCCCCGGCCAGGAATAGTTGCTGAACACCCCAGGCCTGCTGAGGTCCCTCCTTGAGTCTCATGTTCAAGCAGTCTTTGTCCATGAAACTGGGAGGCGACCGTGTTAGCTGCCAGTTCCTGACAGCCACCTCTCACCAGTGGCTTCACTCTGTGTCCCTGACCCAGCACATGGCACAAGAGTGCCTGCCATCCGTCAGTGTTTCTACAGCAGCAATCCCAAGATGCTGGAGCTAGAGGGGACCTGACCTGAGAGAAGATACCTTCAGTGGCTGCCAGGCTGTTCCTTGGAACCTGTGCAGGGATGAGGCCTGCCTGTGTTAATACACCTAGTGAGGAGTGGAGCTGAATTTGAATGCAAGCCTTGGCACCTTAATTGAGCAAGTTTGAAACCTCGCTTGTTGCCCTTCTGGAAGGAGTCAGGAATTTCCAGTTCTGGGCCTGGGCTGTGGGTCTGGCAGACAGACCTCTGGCCCTAGGTTTGGGTGCCAGGTTCTCTGCTTCCAGAATGAGAAGCTTTGCTGTGCACCAGGACCTGGGCCCTTCTGGTATCTCCTGAATGAAAAACAAGGGATATTTAATAAATATGGATTTAAATAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</dnaseq>

Latest revision as of 11:47, 11 August 2019

Annotated Information

Name

Approved symbol: SNHG15

Approved name: small nucleolar RNA host gene 15

HGNC ID: HGNC:27797

Previous symbols:C7orf40

Previous names: chromosome 7 open reading frame 40; small nucleolar RNA host gene 15 (non-protein coding)

Alias symbols: FLJ38860; MYO1GUT; Linc-Myo1g

Alias names: MYO1G upstream transcript

RefSeq ID: NR_003697

Ensembl ID: ENSG00000232956

LncBook ID: HSALNT0289249

Chromosome

7p13

Characteristics

Please input characteristics information here.

Expression

Please input expression information here.

Regulation

Please input regulation information here.

Function

Please input function information here.

Disease

Please input disease information here.

Evolution

Please input evolution information here.

Labs working on this lncRNA

Please input related labs here.

References


Sequence

>gi|154937378|ref|NR_003697.1| Homo sapiens small nucleolar RNA host gene 15 (SNHG15), long non-coding RNA

000001 GCGCGGCGTC AGGCTTGGCT GGCAGACCTG TACTCCGTAC TCCGTACTTC GTAGTCGCAG CGGCGCGGTC TTCGGCAGTT 000080
000081 TAGTCATCCA CCGCCATCCT GGGCCCCACG TGTTGCCTGA CCATTCCTGA GCCCAGGTGG GAGCCGTGGC TGAGGTGACG 000160
000161 GTCTCAAAGT GGAAGAGCTT ACTGTCACAG CAACTCCTTT GCAAGATGCC CCGGCCAGGA ATAGTTGCTG AACACCCCAG 000240
000241 GCCTGCTGAG GTCCCTCCTT GAGTCTCATG TTCAAGCAGT CTTTGTCCAT GAAACTGGGA GGCGACCGTG TTAGCTGCCA 000320
000321 GTTCCTGACA GCCACCTCTC ACCAGTGGCT TCACTCTGTG TCCCTGACCC AGCACATGGC ACAAGAGTGC CTGCCATCCG 000400
000401 TCAGTGTTTC TACAGCAGCA ATCCCAAGAT GCTGGAGCTA GAGGGGACCT GACCTGAGAG AAGATACCTT CAGTGGCTGC 000480
000481 CAGGCTGTTC CTTGGAACCT GTGCAGGGAT GAGGCCTGCC TGTGTTAATA CACCTAGTGA GGAGTGGAGC TGAATTTGAA 000560
000561 TGCAAGCCTT GGCACCTTAA TTGAGCAAGT TTGAAACCTC GCTTGTTGCC CTTCTGGAAG GAGTCAGGAA TTTCCAGTTC 000640
000641 TGGGCCTGGG CTGTGGGTCT GGCAGACAGA CCTCTGGCCC TAGGTTTGGG TGCCAGGTTC TCTGCTTCCA GAATGAGAAG 000720
000721 CTTTGCTGTG CACCAGGACC TGGGCCCTTC TGGTATCTCC TGAATGAAAA ACAAGGGATA TTTAATAAAT ATGGATTTAA 000800
000801 ATAAAAAGAA AAAAAAAAAA AAAAAAAAAA AAAAAAA