Difference between revisions of "Lnc-CHRAC1-2:1"

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sequence = <dnaseq>CGGAGGTCGGGAAGCTCCCTCCCAGCCCGGAGCTTGAACTTGAACGCGGCCGGCCGCTCGCGCAGGACCACACCGCCACCTCCCGGCGCGGCCCCAGAACCCAGATAATCCGTTTAAAGCACTGAGAAAATCTAAGAAGTTTTTAGTAAACTGTAGCTGGTATCAGGGATCAGATCAGCGGACACGCCCATTCCAGCAGTCAGGGGCCTGCTCGGACCGTCGTGCACCTCCGAGCGTTTCTGTCCGGTCCCTCTGGGTCCGTCTGGTTTTCGGAGGCTTTCCTGGAAAAGCCAGCCTGTGGCTACCTCCTTTCTCCCCTAAGTGATGGAGGATTAGAAGGCAGAGGTTGACCCACAATCTAAAGTGCCTGGTCGCCTTTTCCCAGATTTCCCGGAGCATTCCTTCACCCCGTGGCATCGGCTGTCTGCATATGGGTGCAAGGCCCTGTTCCGGGCGGAGAATAAACAGGAGTTCTGACTGACAGGAGCTCCGCAGCCAGCAGGGTGGTCACTAGTTCTCTGCAGTCTCGGAGGACAGCCCTGAAGAAGGGCAGGAGAACCAGCACTTCCTCCGAAAACTCAAAAGGACATCAGTCTTCACCAAGTTGCCGATACAAAACGTGCTCCTGAAATGTGTAGTAATGAACACCAGGAAACCTGGGTAGGAGTGTGCATGGCATTCTTCATCACCGCTTGGACTGCATGGCACTGAATACCCACGGAGAGCAGGATGGAGAAACAGTGTGCTCATATTCACAGGATGGAATCTAGCCATTCACAAAAATTCCAAAACAGGCAAAATTAAACTGCATTCTTTAGGGAAGCATCATTAAGTAGTAAATAATTGACAGAAGGGCAAGAAGGTGCTTACTCTAAGTGTCAGAATGGTGGATACAGCTGGGGGTGAGAGGGCTGTGACCACAGCAGGGCCCCTGGGGGATTTGGGGGTGCCAGGCCTGTTCCTTCCTGCAATGGTGCCCTTTGGCAGCCATCCCTTAAACTGCACTTTTACTTTATATGCTTTTCTGTACCTTTACTGTAGTATTTCACGGAAATTTTTAAATAATCATGAATGTTACCACTTTCCTATTTATGAACCATGCAACCTCATCAATCTTCCCAGTTCGCAGATGCCCACCCTCTCTCTCTGCCCCTGTCTCCTTCACATATCCCCAAAACTCGTTTTGGCCCGAAATCCCTGAGGCCCAACTGCCCTGCTGTCAGCGACTGCACGCCTCAGCAAAGGCCCAGAAGGCTCTGTCATCACTGGCTGCCCTCAGCCCGCCTTCAGCTCCTTTGAGCGCTGTGTTGGGGAACTTTGTTGCAAGGATTTCGTTCCAGAAGGATCCTGATGCTTTGATAAGACCGTGGGCTCTAATCACAGCCAGGGACATTTGCAGCAGCCTGGCCTGCAGCTCTGCACACTGGGTGCACTCAGTCTAAAGCACCAGCTCCCCATGAGAGAGAAAGAAGGGGTGAGGGGAAGTACAGAGAAAGCTCCTGAGGCCACAGGGCTGACAAAGCCCTCGGCTTTGGGGGCACTTTGTTTCTTCAAGACTAAAATGCAGGCAATGGAATAAATCATTTGTTCCTAAAACATGTTCTGCACATGATTAAAGCAGCTTTGGGAAGTCAAGTAAATTGGGAAGCACTGGATCAAACAATGATAAATAAGTTTATTGTCTGCAGGCCTTCTCAGAGCCTGTAGCAAGGTGAGAAGAATCATGCTTCTACAAAGAGGAAGGA</dnaseq>|
 
sequence = <dnaseq>CGGAGGTCGGGAAGCTCCCTCCCAGCCCGGAGCTTGAACTTGAACGCGGCCGGCCGCTCGCGCAGGACCACACCGCCACCTCCCGGCGCGGCCCCAGAACCCAGATAATCCGTTTAAAGCACTGAGAAAATCTAAGAAGTTTTTAGTAAACTGTAGCTGGTATCAGGGATCAGATCAGCGGACACGCCCATTCCAGCAGTCAGGGGCCTGCTCGGACCGTCGTGCACCTCCGAGCGTTTCTGTCCGGTCCCTCTGGGTCCGTCTGGTTTTCGGAGGCTTTCCTGGAAAAGCCAGCCTGTGGCTACCTCCTTTCTCCCCTAAGTGATGGAGGATTAGAAGGCAGAGGTTGACCCACAATCTAAAGTGCCTGGTCGCCTTTTCCCAGATTTCCCGGAGCATTCCTTCACCCCGTGGCATCGGCTGTCTGCATATGGGTGCAAGGCCCTGTTCCGGGCGGAGAATAAACAGGAGTTCTGACTGACAGGAGCTCCGCAGCCAGCAGGGTGGTCACTAGTTCTCTGCAGTCTCGGAGGACAGCCCTGAAGAAGGGCAGGAGAACCAGCACTTCCTCCGAAAACTCAAAAGGACATCAGTCTTCACCAAGTTGCCGATACAAAACGTGCTCCTGAAATGTGTAGTAATGAACACCAGGAAACCTGGGTAGGAGTGTGCATGGCATTCTTCATCACCGCTTGGACTGCATGGCACTGAATACCCACGGAGAGCAGGATGGAGAAACAGTGTGCTCATATTCACAGGATGGAATCTAGCCATTCACAAAAATTCCAAAACAGGCAAAATTAAACTGCATTCTTTAGGGAAGCATCATTAAGTAGTAAATAATTGACAGAAGGGCAAGAAGGTGCTTACTCTAAGTGTCAGAATGGTGGATACAGCTGGGGGTGAGAGGGCTGTGACCACAGCAGGGCCCCTGGGGGATTTGGGGGTGCCAGGCCTGTTCCTTCCTGCAATGGTGCCCTTTGGCAGCCATCCCTTAAACTGCACTTTTACTTTATATGCTTTTCTGTACCTTTACTGTAGTATTTCACGGAAATTTTTAAATAATCATGAATGTTACCACTTTCCTATTTATGAACCATGCAACCTCATCAATCTTCCCAGTTCGCAGATGCCCACCCTCTCTCTCTGCCCCTGTCTCCTTCACATATCCCCAAAACTCGTTTTGGCCCGAAATCCCTGAGGCCCAACTGCCCTGCTGTCAGCGACTGCACGCCTCAGCAAAGGCCCAGAAGGCTCTGTCATCACTGGCTGCCCTCAGCCCGCCTTCAGCTCCTTTGAGCGCTGTGTTGGGGAACTTTGTTGCAAGGATTTCGTTCCAGAAGGATCCTGATGCTTTGATAAGACCGTGGGCTCTAATCACAGCCAGGGACATTTGCAGCAGCCTGGCCTGCAGCTCTGCACACTGGGTGCACTCAGTCTAAAGCACCAGCTCCCCATGAGAGAGAAAGAAGGGGTGAGGGGAAGTACAGAGAAAGCTCCTGAGGCCACAGGGCTGACAAAGCCCTCGGCTTTGGGGGCACTTTGTTTCTTCAAGACTAAAATGCAGGCAATGGAATAAATCATTTGTTCCTAAAACATGTTCTGCACATGATTAAAGCAGCTTTGGGAAGTCAAGTAAATTGGGAAGCACTGGATCAAACAATGATAAATAAGTTTATTGTCTGCAGGCCTTCTCAGAGCCTGTAGCAAGGTGAGAAGAATCATGCTTCTACAAAGAGGAAGGA</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:lnc-CHRAC1-2]]
+
[[Category:Intergenic]][[Category:lnc-CHRAC1-2]][[Category:NONHSAG051406]]

Revision as of 12:15, 13 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-CHRAC1-2:1

Source

LNCipedia2.1

Same with

NONHSAT129383

Classification

intergenic

Length

1745 nt

Genomic location

chr8+:141646243..141648531

Exon number

2

Exons

141646243..141647585,141648130..141648531

Genome context

Sequence
000001 CGGAGGTCGG GAAGCTCCCT CCCAGCCCGG AGCTTGAACT TGAACGCGGC CGGCCGCTCG CGCAGGACCA CACCGCCACC 000080
000081 TCCCGGCGCG GCCCCAGAAC CCAGATAATC CGTTTAAAGC ACTGAGAAAA TCTAAGAAGT TTTTAGTAAA CTGTAGCTGG 000160
000161 TATCAGGGAT CAGATCAGCG GACACGCCCA TTCCAGCAGT CAGGGGCCTG CTCGGACCGT CGTGCACCTC CGAGCGTTTC 000240
000241 TGTCCGGTCC CTCTGGGTCC GTCTGGTTTT CGGAGGCTTT CCTGGAAAAG CCAGCCTGTG GCTACCTCCT TTCTCCCCTA 000320
000321 AGTGATGGAG GATTAGAAGG CAGAGGTTGA CCCACAATCT AAAGTGCCTG GTCGCCTTTT CCCAGATTTC CCGGAGCATT 000400
000401 CCTTCACCCC GTGGCATCGG CTGTCTGCAT ATGGGTGCAA GGCCCTGTTC CGGGCGGAGA ATAAACAGGA GTTCTGACTG 000480
000481 ACAGGAGCTC CGCAGCCAGC AGGGTGGTCA CTAGTTCTCT GCAGTCTCGG AGGACAGCCC TGAAGAAGGG CAGGAGAACC 000560
000561 AGCACTTCCT CCGAAAACTC AAAAGGACAT CAGTCTTCAC CAAGTTGCCG ATACAAAACG TGCTCCTGAA ATGTGTAGTA 000640
000641 ATGAACACCA GGAAACCTGG GTAGGAGTGT GCATGGCATT CTTCATCACC GCTTGGACTG CATGGCACTG AATACCCACG 000720
000721 GAGAGCAGGA TGGAGAAACA GTGTGCTCAT ATTCACAGGA TGGAATCTAG CCATTCACAA AAATTCCAAA ACAGGCAAAA 000800
000801 TTAAACTGCA TTCTTTAGGG AAGCATCATT AAGTAGTAAA TAATTGACAG AAGGGCAAGA AGGTGCTTAC TCTAAGTGTC 000880
000881 AGAATGGTGG ATACAGCTGG GGGTGAGAGG GCTGTGACCA CAGCAGGGCC CCTGGGGGAT TTGGGGGTGC CAGGCCTGTT 000960
000961 CCTTCCTGCA ATGGTGCCCT TTGGCAGCCA TCCCTTAAAC TGCACTTTTA CTTTATATGC TTTTCTGTAC CTTTACTGTA 001040
001041 GTATTTCACG GAAATTTTTA AATAATCATG AATGTTACCA CTTTCCTATT TATGAACCAT GCAACCTCAT CAATCTTCCC 001120
001121 AGTTCGCAGA TGCCCACCCT CTCTCTCTGC CCCTGTCTCC TTCACATATC CCCAAAACTC GTTTTGGCCC GAAATCCCTG 001200
001201 AGGCCCAACT GCCCTGCTGT CAGCGACTGC ACGCCTCAGC AAAGGCCCAG AAGGCTCTGT CATCACTGGC TGCCCTCAGC 001280
001281 CCGCCTTCAG CTCCTTTGAG CGCTGTGTTG GGGAACTTTG TTGCAAGGAT TTCGTTCCAG AAGGATCCTG ATGCTTTGAT 001360
001361 AAGACCGTGG GCTCTAATCA CAGCCAGGGA CATTTGCAGC AGCCTGGCCT GCAGCTCTGC ACACTGGGTG CACTCAGTCT 001440
001441 AAAGCACCAG CTCCCCATGA GAGAGAAAGA AGGGGTGAGG GGAAGTACAG AGAAAGCTCC TGAGGCCACA GGGCTGACAA 001520
001521 AGCCCTCGGC TTTGGGGGCA CTTTGTTTCT TCAAGACTAA AATGCAGGCA ATGGAATAAA TCATTTGTTC CTAAAACATG 001600
001601 TTCTGCACAT GATTAAAGCA GCTTTGGGAA GTCAAGTAAA TTGGGAAGCA CTGGATCAAA CAATGATAAA TAAGTTTATT 001680
001681 GTCTGCAGGC CTTCTCAGAG CCTGTAGCAA GGTGAGAAGA ATCATGCTTC TACAAAGAGG AAGGA
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