Difference between revisions of "LINC00365"
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==Annotated Information== | ==Annotated Information== | ||
| − | === | + | ===Name=== |
| − | LINC00365 | + | LINC00365:long intergenic non-protein coding RNA 365 |
| − | + | ||
| − | long intergenic non-protein coding RNA 365 | + | ===Expression=== |
| − | === | + | High expression of LINC00365 shows significantly a shorter overall survival in Esophageal cancer patients.<ref name="ref1" /> |
| − | + | ===Diseases=== | |
| − | === | + | Esophageal cancer <ref name="ref1" /> |
| − | + | ===Sequence=== | |
| − | === | + | >NR_046998.1 Homo sapiens long intergenic non-protein coding RNA 365 (LINC00365), long non-coding RNA |
| − | + | <dnaseq>AGGAGTCCCCTGCTCAACAGCGTGCTCCTGGTGATACTGCCACCCGTAACGGGTACTGGCTTTGCTAACA | |
| − | + | TCCTGACGAGACGTCGGGGAGAGACGGGAAGTGGCAGGTTGGGCAAGATAGAGGAGGAAAGGACTCTACC | |
| − | + | TCATGGCTTGTCCAGAAGAGGGCAGGGCCACCCCTGCAGCCAGGCCTCCCGGGCCCTGGAGGTAGGAGGG | |
| − | == | + | GGACGATGGCCTCTAAGAGCACTCTGAGACCAGGAGCCTGTTCTCTCGGGCCTGAAGGCTTCGCTTCCAC |
| − | + | TGTTCTACGCTGCCGCCCTGGCCTGGCCACCTCCCCTCCACTGTGTGGCTGGCTTTTCTCTGCCTTCTGC | |
| − | + | TGCCTGATGGGATCTCCCACTCACCTCCACGAGGATCTGAGAGGAAAGGGTGCTGAGGAGAGGAGCGTGG | |
| − | + | AGTGGGCAGGCTCTTGATGCCAAGCCAAGAATCTGCATGGCTCATTTGAAACTTCGCAGTGCCCTTTATC | |
| − | + | TCTTGTTCTCTTTTATGTATAAGCTCGTCTTTCTCCCATACAGTTGTAAACCCCAAAGGGTAGGGACTGT | |
| − | + | ATTCGGTTCCTTATTTATATCCTGTAAGACAGTGACTCTCAAACTCATCAGAATCACCTGGGGAGTTTTA | |
| − | = | + | AAAACTTGATTCCTCCAGAAACCATAAAGACCAAAGATTTAAAAATATCACCATATTAAAACAGAATGAA |
| − | Esophageal Cancer | + | GCAAAATCCTTCTGTAAAGCTAAACAAACAAACAAACTCATGAATCAGTCAGAAGAAATTATAAACAAGG |
| + | GGAAAACAGTATTTGGAATATAGATGGAAGACACACTAATTTCTTTAATTTGCAACAAATGTCTATAAAT | ||
| + | AAGAAATATACAAACAACTCAATAAATGCTGGGCCAGGAATCTGAACTGGCAGAACATGGAAAAGAAATA | ||
| + | CCAGTGACCAAGAAACATATGAAGAGCTGCTCATCCTTCCTCAGAAATAAAGAGACGCAAATCAGAACAA | ||
| + | TGCCAGACCACTTTTCATGAATCTGATTAGCAAAAATTATAAAGTTTCATGATGCCCATTGCTGATGAGA | ||
| + | GTATGGAAGCAGATGCCAGTGAATGCAAACTTGGTGGATTTTGGCACCTGTGTGACAAGGTGGGGCGGTG | ||
| + | GTTCTCACACCTGCATGAGCTTCTGAATCACATGATGAACTTTTAAAAACATAGATTCTCTGCGCCCCCA | ||
| + | TCCCATACTGCCATAAGGCACCCGCGTGTAACTAAGGGCACAATTTGTGAAGTTCGAAATGGTAATAGAG | ||
| + | ACCAGACTAGTAAATTTCAACTAAAGGAATTTTGTCAACATACATCAACATTTTTAAAACATGAGTAACC | ||
| + | TTTGACCCAGCAATTCTACTGATGGGAGCTGATTCTGAAATTTCCCACAGAAGAGTATCAACGTCGGCAA | ||
| + | GAATGGATGCCCACAGCAGCATTATTTGTATAGCAAACAACCTCAATGTCCATCAATAGGAACCTGGATA | ||
| + | AATAAACTGTGGCACACTCTTAGATCTTTTAAAGAGATTTAGTAGGAACTCCATTTGCTGATATAGAGCA | ||
| + | GTCTCTGAGTTATGTTGTGCAATGAAAAAATCAAGCAGCAGAGCAGTATAAATGGTGTAATCCATTTTCC | ||
| + | ACATAACTTTTAAAATGACACACCATATACTTTGGTAAATGCACAAATTCTTTTTCAATGGAAAATCTAC | ||
| + | AAGAAGCTGATAACAGTGGCAACTTTGAGGGAAGGATGAGAAGAGAGGTTCTTACCTTTCATTCAGTACT | ||
| + | GCTTGATTTTCCTACTTCCTACTTTGTGCATTGATTAGTTTTAGTGGAGAACTTCAGTAAGTGTCATCTG | ||
| + | AAAGGTGGAGTTATGGGACAATTTTGGTTTCTCCTTTAGAGTTTTCTGTAAAGGATATTCAATAATTGAA | ||
| + | GATTCTCAGGCCATATACCAGATACACCAAGTTTGGGTGGAGATGCTGGCATGGGACTCTAGAAATCAGC | ||
| + | TTGTCGTGTGATTCTGCTCATCAGTCAGGTTTGAGACTCACTGCAGAAGATTCTGGAAGAAAAATGCTCT | ||
| + | CTTCTCTAGCTCAGGGGTTATGAGGATGAGAGGGTGGGGTGGCTGCAGCCCTTTTGTTTCCATGAAAGGA | ||
| + | GAACCTGAATGACCTTGTGCAACCTAAGGTCAAAGAAATGCATGGCTGGCAAGTAAACCACAGAGAGGAA | ||
| + | CTTGTCCGCTGGTACATCAGTAGGCCACAGAATCATGCCTTTCCCGAAGAAGGACGTCCTGTGTCTAGAC | ||
| + | TTTTCAGTTATGAAGCCAATACGTCCTCTTTGTTGTTTAATGCAGCTTGAGTTAGGTCTTTTGTCACATG | ||
| + | CAATATTAAGAATCCTAACTGATAGACCTCCACTGAGACAAGCTGAGTATGTCTTTATCTCTTGCAGACT | ||
| + | GAAATTGCCTAATTTATAAAGTATTTCATGATGTTTGCAAGATAAACCCTTGTCTGCTGCCTTGGGCTAC | ||
| + | ATCTGATGATTGCCTGCAATATTTCTGCCTCTAGAAATGAACTGTCAAACCAAGAAGTATGTCCTTGGAA | ||
| + | TGCATCCTCCACTTTAGCAAAAGAATTATGTGTTTTGTTTGCTCTTCATCATGTAACTCTTGAATAAATT | ||
| + | TGGATGCAACAGATTAAGGGCATAACCAGGAAATA</dnaseq> | ||
| + | |||
| + | ==Labs working on this lncRNA== | ||
| + | *Department of Gastroenterology and Hepatology, The Second Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang, China (mainland). | ||
| + | ==References== | ||
| + | <references> | ||
| + | <ref name="ref1"> | ||
| + | Fan Q, Liu B. Identification of a RNA-Seq Based 8-Long Non-Coding RNA | ||
| + | Signature Predicting Survival in Esophageal Cancer. Med Sci Monit. 2016 Dec | ||
| + | 28;22:5163-5172. | ||
| + | </ref> | ||
| + | </references> | ||
Revision as of 03:06, 17 September 2017
Contents
Annotated Information
Name
LINC00365:long intergenic non-protein coding RNA 365
Expression
High expression of LINC00365 shows significantly a shorter overall survival in Esophageal cancer patients.[1]
Diseases
Esophageal cancer [1]
Sequence
>NR_046998.1 Homo sapiens long intergenic non-protein coding RNA 365 (LINC00365), long non-coding RNA
000001 AGGAGTCCCC TGCTCAACAG CGTGCTCCTG GTGATACTGC CACCCGTAAC GGGTACTGGC TTTGCTAACA TCCTGACGAG 000080
000081 ACGTCGGGGA GAGACGGGAA GTGGCAGGTT GGGCAAGATA GAGGAGGAAA GGACTCTACC TCATGGCTTG TCCAGAAGAG 000160
000161 GGCAGGGCCA CCCCTGCAGC CAGGCCTCCC GGGCCCTGGA GGTAGGAGGG GGACGATGGC CTCTAAGAGC ACTCTGAGAC 000240
000241 CAGGAGCCTG TTCTCTCGGG CCTGAAGGCT TCGCTTCCAC TGTTCTACGC TGCCGCCCTG GCCTGGCCAC CTCCCCTCCA 000320
000321 CTGTGTGGCT GGCTTTTCTC TGCCTTCTGC TGCCTGATGG GATCTCCCAC TCACCTCCAC GAGGATCTGA GAGGAAAGGG 000400
000401 TGCTGAGGAG AGGAGCGTGG AGTGGGCAGG CTCTTGATGC CAAGCCAAGA ATCTGCATGG CTCATTTGAA ACTTCGCAGT 000480
000481 GCCCTTTATC TCTTGTTCTC TTTTATGTAT AAGCTCGTCT TTCTCCCATA CAGTTGTAAA CCCCAAAGGG TAGGGACTGT 000560
000561 ATTCGGTTCC TTATTTATAT CCTGTAAGAC AGTGACTCTC AAACTCATCA GAATCACCTG GGGAGTTTTA AAAACTTGAT 000640
000641 TCCTCCAGAA ACCATAAAGA CCAAAGATTT AAAAATATCA CCATATTAAA ACAGAATGAA GCAAAATCCT TCTGTAAAGC 000720
000721 TAAACAAACA AACAAACTCA TGAATCAGTC AGAAGAAATT ATAAACAAGG GGAAAACAGT ATTTGGAATA TAGATGGAAG 000800
000801 ACACACTAAT TTCTTTAATT TGCAACAAAT GTCTATAAAT AAGAAATATA CAAACAACTC AATAAATGCT GGGCCAGGAA 000880
000881 TCTGAACTGG CAGAACATGG AAAAGAAATA CCAGTGACCA AGAAACATAT GAAGAGCTGC TCATCCTTCC TCAGAAATAA 000960
000961 AGAGACGCAA ATCAGAACAA TGCCAGACCA CTTTTCATGA ATCTGATTAG CAAAAATTAT AAAGTTTCAT GATGCCCATT 001040
001041 GCTGATGAGA GTATGGAAGC AGATGCCAGT GAATGCAAAC TTGGTGGATT TTGGCACCTG TGTGACAAGG TGGGGCGGTG 001120
001121 GTTCTCACAC CTGCATGAGC TTCTGAATCA CATGATGAAC TTTTAAAAAC ATAGATTCTC TGCGCCCCCA TCCCATACTG 001200
001201 CCATAAGGCA CCCGCGTGTA ACTAAGGGCA CAATTTGTGA AGTTCGAAAT GGTAATAGAG ACCAGACTAG TAAATTTCAA 001280
001281 CTAAAGGAAT TTTGTCAACA TACATCAACA TTTTTAAAAC ATGAGTAACC TTTGACCCAG CAATTCTACT GATGGGAGCT 001360
001361 GATTCTGAAA TTTCCCACAG AAGAGTATCA ACGTCGGCAA GAATGGATGC CCACAGCAGC ATTATTTGTA TAGCAAACAA 001440
001441 CCTCAATGTC CATCAATAGG AACCTGGATA AATAAACTGT GGCACACTCT TAGATCTTTT AAAGAGATTT AGTAGGAACT 001520
001521 CCATTTGCTG ATATAGAGCA GTCTCTGAGT TATGTTGTGC AATGAAAAAA TCAAGCAGCA GAGCAGTATA AATGGTGTAA 001600
001601 TCCATTTTCC ACATAACTTT TAAAATGACA CACCATATAC TTTGGTAAAT GCACAAATTC TTTTTCAATG GAAAATCTAC 001680
001681 AAGAAGCTGA TAACAGTGGC AACTTTGAGG GAAGGATGAG AAGAGAGGTT CTTACCTTTC ATTCAGTACT GCTTGATTTT 001760
001761 CCTACTTCCT ACTTTGTGCA TTGATTAGTT TTAGTGGAGA ACTTCAGTAA GTGTCATCTG AAAGGTGGAG TTATGGGACA 001840
001841 ATTTTGGTTT CTCCTTTAGA GTTTTCTGTA AAGGATATTC AATAATTGAA GATTCTCAGG CCATATACCA GATACACCAA 001920
001921 GTTTGGGTGG AGATGCTGGC ATGGGACTCT AGAAATCAGC TTGTCGTGTG ATTCTGCTCA TCAGTCAGGT TTGAGACTCA 002000
002001 CTGCAGAAGA TTCTGGAAGA AAAATGCTCT CTTCTCTAGC TCAGGGGTTA TGAGGATGAG AGGGTGGGGT GGCTGCAGCC 002080
002081 CTTTTGTTTC CATGAAAGGA GAACCTGAAT GACCTTGTGC AACCTAAGGT CAAAGAAATG CATGGCTGGC AAGTAAACCA 002160
002161 CAGAGAGGAA CTTGTCCGCT GGTACATCAG TAGGCCACAG AATCATGCCT TTCCCGAAGA AGGACGTCCT GTGTCTAGAC 002240
002241 TTTTCAGTTA TGAAGCCAAT ACGTCCTCTT TGTTGTTTAA TGCAGCTTGA GTTAGGTCTT TTGTCACATG CAATATTAAG 002320
002321 AATCCTAACT GATAGACCTC CACTGAGACA AGCTGAGTAT GTCTTTATCT CTTGCAGACT GAAATTGCCT AATTTATAAA 002400
002401 GTATTTCATG ATGTTTGCAA GATAAACCCT TGTCTGCTGC CTTGGGCTAC ATCTGATGAT TGCCTGCAAT ATTTCTGCCT 002480
002481 CTAGAAATGA ACTGTCAAAC CAAGAAGTAT GTCCTTGGAA TGCATCCTCC ACTTTAGCAA AAGAATTATG TGTTTTGTTT 002560
002561 GCTCTTCATC ATGTAACTCT TGAATAAATT TGGATGCAAC AGATTAAGGG CATAACCAGG AAATA
000081 ACGTCGGGGA GAGACGGGAA GTGGCAGGTT GGGCAAGATA GAGGAGGAAA GGACTCTACC TCATGGCTTG TCCAGAAGAG 000160
000161 GGCAGGGCCA CCCCTGCAGC CAGGCCTCCC GGGCCCTGGA GGTAGGAGGG GGACGATGGC CTCTAAGAGC ACTCTGAGAC 000240
000241 CAGGAGCCTG TTCTCTCGGG CCTGAAGGCT TCGCTTCCAC TGTTCTACGC TGCCGCCCTG GCCTGGCCAC CTCCCCTCCA 000320
000321 CTGTGTGGCT GGCTTTTCTC TGCCTTCTGC TGCCTGATGG GATCTCCCAC TCACCTCCAC GAGGATCTGA GAGGAAAGGG 000400
000401 TGCTGAGGAG AGGAGCGTGG AGTGGGCAGG CTCTTGATGC CAAGCCAAGA ATCTGCATGG CTCATTTGAA ACTTCGCAGT 000480
000481 GCCCTTTATC TCTTGTTCTC TTTTATGTAT AAGCTCGTCT TTCTCCCATA CAGTTGTAAA CCCCAAAGGG TAGGGACTGT 000560
000561 ATTCGGTTCC TTATTTATAT CCTGTAAGAC AGTGACTCTC AAACTCATCA GAATCACCTG GGGAGTTTTA AAAACTTGAT 000640
000641 TCCTCCAGAA ACCATAAAGA CCAAAGATTT AAAAATATCA CCATATTAAA ACAGAATGAA GCAAAATCCT TCTGTAAAGC 000720
000721 TAAACAAACA AACAAACTCA TGAATCAGTC AGAAGAAATT ATAAACAAGG GGAAAACAGT ATTTGGAATA TAGATGGAAG 000800
000801 ACACACTAAT TTCTTTAATT TGCAACAAAT GTCTATAAAT AAGAAATATA CAAACAACTC AATAAATGCT GGGCCAGGAA 000880
000881 TCTGAACTGG CAGAACATGG AAAAGAAATA CCAGTGACCA AGAAACATAT GAAGAGCTGC TCATCCTTCC TCAGAAATAA 000960
000961 AGAGACGCAA ATCAGAACAA TGCCAGACCA CTTTTCATGA ATCTGATTAG CAAAAATTAT AAAGTTTCAT GATGCCCATT 001040
001041 GCTGATGAGA GTATGGAAGC AGATGCCAGT GAATGCAAAC TTGGTGGATT TTGGCACCTG TGTGACAAGG TGGGGCGGTG 001120
001121 GTTCTCACAC CTGCATGAGC TTCTGAATCA CATGATGAAC TTTTAAAAAC ATAGATTCTC TGCGCCCCCA TCCCATACTG 001200
001201 CCATAAGGCA CCCGCGTGTA ACTAAGGGCA CAATTTGTGA AGTTCGAAAT GGTAATAGAG ACCAGACTAG TAAATTTCAA 001280
001281 CTAAAGGAAT TTTGTCAACA TACATCAACA TTTTTAAAAC ATGAGTAACC TTTGACCCAG CAATTCTACT GATGGGAGCT 001360
001361 GATTCTGAAA TTTCCCACAG AAGAGTATCA ACGTCGGCAA GAATGGATGC CCACAGCAGC ATTATTTGTA TAGCAAACAA 001440
001441 CCTCAATGTC CATCAATAGG AACCTGGATA AATAAACTGT GGCACACTCT TAGATCTTTT AAAGAGATTT AGTAGGAACT 001520
001521 CCATTTGCTG ATATAGAGCA GTCTCTGAGT TATGTTGTGC AATGAAAAAA TCAAGCAGCA GAGCAGTATA AATGGTGTAA 001600
001601 TCCATTTTCC ACATAACTTT TAAAATGACA CACCATATAC TTTGGTAAAT GCACAAATTC TTTTTCAATG GAAAATCTAC 001680
001681 AAGAAGCTGA TAACAGTGGC AACTTTGAGG GAAGGATGAG AAGAGAGGTT CTTACCTTTC ATTCAGTACT GCTTGATTTT 001760
001761 CCTACTTCCT ACTTTGTGCA TTGATTAGTT TTAGTGGAGA ACTTCAGTAA GTGTCATCTG AAAGGTGGAG TTATGGGACA 001840
001841 ATTTTGGTTT CTCCTTTAGA GTTTTCTGTA AAGGATATTC AATAATTGAA GATTCTCAGG CCATATACCA GATACACCAA 001920
001921 GTTTGGGTGG AGATGCTGGC ATGGGACTCT AGAAATCAGC TTGTCGTGTG ATTCTGCTCA TCAGTCAGGT TTGAGACTCA 002000
002001 CTGCAGAAGA TTCTGGAAGA AAAATGCTCT CTTCTCTAGC TCAGGGGTTA TGAGGATGAG AGGGTGGGGT GGCTGCAGCC 002080
002081 CTTTTGTTTC CATGAAAGGA GAACCTGAAT GACCTTGTGC AACCTAAGGT CAAAGAAATG CATGGCTGGC AAGTAAACCA 002160
002161 CAGAGAGGAA CTTGTCCGCT GGTACATCAG TAGGCCACAG AATCATGCCT TTCCCGAAGA AGGACGTCCT GTGTCTAGAC 002240
002241 TTTTCAGTTA TGAAGCCAAT ACGTCCTCTT TGTTGTTTAA TGCAGCTTGA GTTAGGTCTT TTGTCACATG CAATATTAAG 002320
002321 AATCCTAACT GATAGACCTC CACTGAGACA AGCTGAGTAT GTCTTTATCT CTTGCAGACT GAAATTGCCT AATTTATAAA 002400
002401 GTATTTCATG ATGTTTGCAA GATAAACCCT TGTCTGCTGC CTTGGGCTAC ATCTGATGAT TGCCTGCAAT ATTTCTGCCT 002480
002481 CTAGAAATGA ACTGTCAAAC CAAGAAGTAT GTCCTTGGAA TGCATCCTCC ACTTTAGCAA AAGAATTATG TGTTTTGTTT 002560
002561 GCTCTTCATC ATGTAACTCT TGAATAAATT TGGATGCAAC AGATTAAGGG CATAACCAGG AAATA
Labs working on this lncRNA
- Department of Gastroenterology and Hepatology, The Second Affiliated Hospital of Harbin Medical University, Harbin, Heilongjiang, China (mainland).
