Difference between revisions of "LINC00322"
Chunlei Yu (talk | contribs) (Created page with "==Annotated Information== ===Approved Symbol=== LINC00322 ===Approved Name=== long intergenic non-protein coding RNA 322 ===Previous Symbols=== "C21orf136, NCRNA00322" ===Syno...") |
Chunlei Yu (talk | contribs) (→Annotated Information) |
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long intergenic non-protein coding RNA 322 | long intergenic non-protein coding RNA 322 | ||
===Previous Symbols=== | ===Previous Symbols=== | ||
| − | + | C21orf136, NCRNA00322 | |
===Synonyms=== | ===Synonyms=== | ||
FLJ16545 | FLJ16545 | ||
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17081983 | 17081983 | ||
===Sequence=== | ===Sequence=== | ||
| − | + | >gi|574957315|ref|NR_103713.2| Homo sapiens long intergenic non-protein coding RNA 322 (LINC00322), long non-coding RNA | |
<dnaseq>TGACCCTCCAAGTTGGGAGTTTCGAGGACCCCCTGAACTTAGAGCTCCTGGGCCGTCTTTCCCTGAGAATGAAGCCAACACAGGCAGGATTGAGCTTAGAGTCTGAATTAGATGGTGCCTAGTGACCGCCTCTGAACTCCTGGACCCAGCTACACCTGAAGCCACTCTACCCCACATTTTCTAGGACTTTCCTGTATGACTGCATGGCTAATAGCACTTCTCCTCGACACCGGTGCTGTTCTCGGAATCCTATCTAGAGCTTACAGCTTTCCCAGCCTCCTGGCTGCCTCCCCATTTCCTCCCACACTGGTGATCCCCCGATGAAATCCTCCTGCCCTTCATCCTGTCTTGGCGTCTGCCTCGCGATGACCCTGGGCTCACAGTCTGGCCACTGCAGCTGAGTGTCGCACTGGCTCAGGTGTGGCAACACGGGGGTTGAAAGGCTCTGAACCAGGCACCAGGAGCCCTGCGCCCCAGGCCAGCCCTCCGCAAACCAGCTTTGTGTCCTCGGACAACTCCAGGCCCATCCTGGGTCTTGCTGTCTGGAGAGAGGAGGAAGCCGGCCACACTCTCCAAGAACATTCAGCCTCCGCACTGCATGGCCTCTGCTTGGTTTCTGGCTGGGCCCAGGGCTCTGCTTGCAGTGTGGAGCCGCAGTGGTGGGTCCCCATGCGAGCCCCCGCCACTGTCTGCTGTCATCACCGGCCCAGATGCCCTTGCCACACAGCACCATTTCCAACTGCGAAGGCCTCCGTGTGGCGCCTGTCGGGACAACACGGCCGGCACAGGCTGGGCTGGGGGAGAAAGGGTGCTGGGCAGCTCTGTGCCCTGCGACTTTGTGGGTCTGCTGGGCTGTCCTTGTCTTGAAAACATTGTATTTTTGACTCCTATAAAGTAGTGGAGATAA</dnaseq> | <dnaseq>TGACCCTCCAAGTTGGGAGTTTCGAGGACCCCCTGAACTTAGAGCTCCTGGGCCGTCTTTCCCTGAGAATGAAGCCAACACAGGCAGGATTGAGCTTAGAGTCTGAATTAGATGGTGCCTAGTGACCGCCTCTGAACTCCTGGACCCAGCTACACCTGAAGCCACTCTACCCCACATTTTCTAGGACTTTCCTGTATGACTGCATGGCTAATAGCACTTCTCCTCGACACCGGTGCTGTTCTCGGAATCCTATCTAGAGCTTACAGCTTTCCCAGCCTCCTGGCTGCCTCCCCATTTCCTCCCACACTGGTGATCCCCCGATGAAATCCTCCTGCCCTTCATCCTGTCTTGGCGTCTGCCTCGCGATGACCCTGGGCTCACAGTCTGGCCACTGCAGCTGAGTGTCGCACTGGCTCAGGTGTGGCAACACGGGGGTTGAAAGGCTCTGAACCAGGCACCAGGAGCCCTGCGCCCCAGGCCAGCCCTCCGCAAACCAGCTTTGTGTCCTCGGACAACTCCAGGCCCATCCTGGGTCTTGCTGTCTGGAGAGAGGAGGAAGCCGGCCACACTCTCCAAGAACATTCAGCCTCCGCACTGCATGGCCTCTGCTTGGTTTCTGGCTGGGCCCAGGGCTCTGCTTGCAGTGTGGAGCCGCAGTGGTGGGTCCCCATGCGAGCCCCCGCCACTGTCTGCTGTCATCACCGGCCCAGATGCCCTTGCCACACAGCACCATTTCCAACTGCGAAGGCCTCCGTGTGGCGCCTGTCGGGACAACACGGCCGGCACAGGCTGGGCTGGGGGAGAAAGGGTGCTGGGCAGCTCTGTGCCCTGCGACTTTGTGGGTCTGCTGGGCTGTCCTTGTCTTGAAAACATTGTATTTTTGACTCCTATAAAGTAGTGGAGATAA</dnaseq> | ||
Latest revision as of 14:01, 23 June 2016
Contents
Annotated Information
Approved Symbol
LINC00322
Approved Name
long intergenic non-protein coding RNA 322
Previous Symbols
C21orf136, NCRNA00322
Synonyms
FLJ16545
Chromosome
21q22.3
RefSeq ID
NR_103713
OMIM ID
_
Ensembl ID
ENSG00000237864
pubmed IDs
17081983
Sequence
>gi|574957315|ref|NR_103713.2| Homo sapiens long intergenic non-protein coding RNA 322 (LINC00322), long non-coding RNA
000001 TGACCCTCCA AGTTGGGAGT TTCGAGGACC CCCTGAACTT AGAGCTCCTG GGCCGTCTTT CCCTGAGAAT GAAGCCAACA 000080
000081 CAGGCAGGAT TGAGCTTAGA GTCTGAATTA GATGGTGCCT AGTGACCGCC TCTGAACTCC TGGACCCAGC TACACCTGAA 000160
000161 GCCACTCTAC CCCACATTTT CTAGGACTTT CCTGTATGAC TGCATGGCTA ATAGCACTTC TCCTCGACAC CGGTGCTGTT 000240
000241 CTCGGAATCC TATCTAGAGC TTACAGCTTT CCCAGCCTCC TGGCTGCCTC CCCATTTCCT CCCACACTGG TGATCCCCCG 000320
000321 ATGAAATCCT CCTGCCCTTC ATCCTGTCTT GGCGTCTGCC TCGCGATGAC CCTGGGCTCA CAGTCTGGCC ACTGCAGCTG 000400
000401 AGTGTCGCAC TGGCTCAGGT GTGGCAACAC GGGGGTTGAA AGGCTCTGAA CCAGGCACCA GGAGCCCTGC GCCCCAGGCC 000480
000481 AGCCCTCCGC AAACCAGCTT TGTGTCCTCG GACAACTCCA GGCCCATCCT GGGTCTTGCT GTCTGGAGAG AGGAGGAAGC 000560
000561 CGGCCACACT CTCCAAGAAC ATTCAGCCTC CGCACTGCAT GGCCTCTGCT TGGTTTCTGG CTGGGCCCAG GGCTCTGCTT 000640
000641 GCAGTGTGGA GCCGCAGTGG TGGGTCCCCA TGCGAGCCCC CGCCACTGTC TGCTGTCATC ACCGGCCCAG ATGCCCTTGC 000720
000721 CACACAGCAC CATTTCCAAC TGCGAAGGCC TCCGTGTGGC GCCTGTCGGG ACAACACGGC CGGCACAGGC TGGGCTGGGG 000800
000801 GAGAAAGGGT GCTGGGCAGC TCTGTGCCCT GCGACTTTGT GGGTCTGCTG GGCTGTCCTT GTCTTGAAAA CATTGTATTT 000880
000881 TTGACTCCTA TAAAGTAGTG GAGATAA
000081 CAGGCAGGAT TGAGCTTAGA GTCTGAATTA GATGGTGCCT AGTGACCGCC TCTGAACTCC TGGACCCAGC TACACCTGAA 000160
000161 GCCACTCTAC CCCACATTTT CTAGGACTTT CCTGTATGAC TGCATGGCTA ATAGCACTTC TCCTCGACAC CGGTGCTGTT 000240
000241 CTCGGAATCC TATCTAGAGC TTACAGCTTT CCCAGCCTCC TGGCTGCCTC CCCATTTCCT CCCACACTGG TGATCCCCCG 000320
000321 ATGAAATCCT CCTGCCCTTC ATCCTGTCTT GGCGTCTGCC TCGCGATGAC CCTGGGCTCA CAGTCTGGCC ACTGCAGCTG 000400
000401 AGTGTCGCAC TGGCTCAGGT GTGGCAACAC GGGGGTTGAA AGGCTCTGAA CCAGGCACCA GGAGCCCTGC GCCCCAGGCC 000480
000481 AGCCCTCCGC AAACCAGCTT TGTGTCCTCG GACAACTCCA GGCCCATCCT GGGTCTTGCT GTCTGGAGAG AGGAGGAAGC 000560
000561 CGGCCACACT CTCCAAGAAC ATTCAGCCTC CGCACTGCAT GGCCTCTGCT TGGTTTCTGG CTGGGCCCAG GGCTCTGCTT 000640
000641 GCAGTGTGGA GCCGCAGTGG TGGGTCCCCA TGCGAGCCCC CGCCACTGTC TGCTGTCATC ACCGGCCCAG ATGCCCTTGC 000720
000721 CACACAGCAC CATTTCCAAC TGCGAAGGCC TCCGTGTGGC GCCTGTCGGG ACAACACGGC CGGCACAGGC TGGGCTGGGG 000800
000801 GAGAAAGGGT GCTGGGCAGC TCTGTGCCCT GCGACTTTGT GGGTCTGCTG GGCTGTCCTT GTCTTGAAAA CATTGTATTT 000880
000881 TTGACTCCTA TAAAGTAGTG GAGATAA
Predicted Small Protein
| Name | LINC00322_smProtein_710:883 |
| Length | 57 |
| Molecular weight | 6099.2 |
| Aromaticity | 0.0877192982456 |
| Instability index | 42.4789473684 |
| Isoelectric point | 8.48992919922 |
| Runs | 9 |
| Runs residual | 0.00394736842105 |
| Runs probability | 0.0574201652633 |
| Amino acid sequence | MPLPHSTISNCEGLRVAPVGTTRPAQAGLGEKGCWAALCPATLWVCWAVLVLKTLYF |
| Secondary structure | LLLLLLLLLLLLLLEELLLLLLLHHHLLLLLLLHHHHHLLLHHHHHHHHHHHHHHLL |
| PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHL |
| PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTo |
