Difference between revisions of "FAM230F"

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Latest revision as of 07:39, 26 December 2018

FAM230F, a lncRNA gene formed from a large segment of the 3' half of theFAM230C sequence duplicated in chr22.

Annotated Information

Name

FAM230F: family with sequence similarity 230 member F (HGNC:52451)

Alias

LINC01663: long intergenic non-protein coding RNA 1663 (HGNC:52451)

Characteristics

This gene belongs to the family of long 8 intergenic non-coding RNA genes in human chromosomal region 22q11.21. This gene carries the TBTA sequence which consists of satellite DNA, Alu elements, and AT-rich sequences.[1]

Function

Functions of RNA transcripts from this family are not known.[1]

Regulation

Please input information here.

Expression

RNA transcripts of these eight FAM230C-related genes are expressed almost exclusively in the testes. [1]

Disease

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Labs working on this lncRNA

Department of Molecular Genetics and Microbiology, School of Medicine Stony Brook University, Stony Brook, New York, United States of America.

References

  1. 1.0 1.1 1.2 Delihas N. A family of long intergenic non-coding RNA genes in human chromosomal region 22q11.2 carry a DNA translocation breakpoint/AT-rich sequence[J]. Plos One. 2018, 13(4):e0195702-e0195702.

Sequence

>ENST00000614596.2, Homo sapiens FAM230F lincRNA cDNA

000001 AGAGCAGATT GAACCTTTGT GGTTTCATTT TCCCTGATTT TGATTTTTCT TATGGGGAAC CTGTCTTGCT GCATTCAAGG 000080
000081 TGACTCGAAG AAGCCTTCCC AAAGGCGTGT GAAAAGGCAG CCCTACTCTA CTACCAAGGT GACGTCAGGG AGCACATTCA 000160
000161 ATGAGAATAC AAGAAGATAT GCTGTGCACA CCAACCAGTG TAGGAGACCT CATGGCTCCC GGGTAAAGAA GAAGAGGTAC 000240
000241 CCACAAGAAG ATGACTTCCA TCATACAGTC TTCAGCAACC TTGAAAGATT GGACAAGCTT CAGCCCACTC TTGAAGCCTC 000320
000321 TGAGGAGTCT CTAGTTCACA AGGACAGAGG AGATGGAGAG AGGCCAGTCA ACGCGAGGGT GGTGCAGGTG GCCCCTCTGA 000400
000401 GGCTTGAATC TACTCCCCAT GAGGACACCG TACACGACAT CACTAACGAG GACGCCACAC ACGACATCGC TAACGAGGAT 000480
000481 ACTGTACACG ACATCGCTAA CGAGGCCGCC GACAAGGGCA TCGCCAACGA GGACG