Difference between revisions of "ENST00000585222.1"

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sequence = <dnaseq>TCCAGGAGCCTGACCTTTCATGTGCCAGTGGCTGGGCTCTTATCACTCTCTCAGGCCGCGATGATGTGCCCTCACATGTGCTATCAGGGATGGCTGGTGCGCCAGCTCTGTTACTCCTCACCCCATAGGGCAGCCCGGGAGGAAGTGAGACTGGGCCCCACCAGCAGGTCAAGTCAGCTTCAAAGGCTGGTACCAGGAAGCCAGACGGTCAGGGGAAAGATGACATTCCCTGGGTAGATCTGACAAACAGCCTTATGAATTCCAGGGTAAAGAAAAGGGGCCCTCTCAAAGGGAAGAGCACAGTGACCAAGCTGAGGTCAAGACCTAGATGTCAGACAGACTGCAGCCACCCTGGGCCAATCTGCAAAGGGTCCGATAAGGAGACAATGCTCTGCTCTCAGCTATCCTGGAGGGTGGATGGCCCCAGGCTCCAGGAAGGAGTCCTCTGGGATGCAGGAGGATTGAGCCACCAATCAAAACCAGCAATTCAAACTTGGAAGAGAAGTGCAAAGGCCAAGATAAGGGGAGGGAGAGCTTCTGCATGGGCAGTAAGTCATGTCCTAACACCTGCCGAAGAAAACCAGGGTCATTCAGAAGTTAAAGTGGAGAAGACAAATTTTATTTGGGACCATTGCAATAGGGGGAGAGAGGCCCCAGTGAAGAACTGGGCTCTGTTCTGAGTACCTGGATAAGTGCGGATGCATAGCCAAGGAGCAGGGGGCAGGAGATGGAAAATTGCTAAGATGAGACATCAAATCTGTGGGGAATTCTGGCTGAACCAACCAAACAGGATTCCTGCTGAAGGCAGTCCAGGGTGATCAGATACCAAGGGTGAAGAGTCAAGCATTTTGATCAGATACAGAGGGTGACCGGGTGACAACAATGGGAGATTCTTACTAAACTGCCTTGACAGCATTATTTGCTGAAACTGGATTTTACAAGGAAGCAGACACAGGCCTAGGAGTAGATTCAGAAGCCTGACTAAAGTTTGGCCAAGCAAAGAATCTTTGTCACACCCCAGGAAGTCTCTCCTTGGATCTGGATAGTTCAGAAGCAGAAGAAAAAGGAAACCCTGTCCCCTGACCCAGACTCAGGCAAGTCTAACGTGCACCTCGTGGAGCCATAAAGGAAGCAGGGACTGAGTTGCTGAGAAGGGGAGAGACTCCCTCCTCTCGACGCTGGCCTGTGTCTAAGGCTGCCTGTAAGAAAGGTACTAGGATCACGAAGGAAGCCAGCCTATCACCTGGCTGGGTGAGAAGATGGAGAACACAGAGGCAGAGAAAGCCCTCCTAGCAGCCTGCAGAGCAGGAGTTGTTATGGAGACCGTTCTAGCTGCTCTGCTGTGACAAGGAGTAATTTCATGTCAAGAGCATGCCCTGGAATGGAAGGCAGGGCTGTGGCTCAGAGGACGCGGCTCCCAGTGGAAAGATGGAGGTGGTGAGCCGTGGGGAACGCTCTCTGCCTGCTTTTGGGAGTCCTCCCTGTGTAGCGCCTCATGACCGAGAAAGCAAACACTAGTGGAACTTGGAGCATTGTGGTGAAAATCAGTAGTTTCCAACTGGATGGGATCAAAAAGAAGTTCCTACTTAAACATTTAGCCTCAGAAGTAGATTTTTTAAAACGAAGCCGCAGTTAATGTGCTGATGAACTGAAGATTGAACTTGAGCTTCACATTCTGTCTTTGGCTGTGAACAAATAACAAATAAGTGCTCCCGTTGTATGGGCTCAGCATGTTCTTGGGAGACTGCTTTAAATCTTATTATTTTATAGTCTTCTGCAA</dnaseq>|
 
sequence = <dnaseq>TCCAGGAGCCTGACCTTTCATGTGCCAGTGGCTGGGCTCTTATCACTCTCTCAGGCCGCGATGATGTGCCCTCACATGTGCTATCAGGGATGGCTGGTGCGCCAGCTCTGTTACTCCTCACCCCATAGGGCAGCCCGGGAGGAAGTGAGACTGGGCCCCACCAGCAGGTCAAGTCAGCTTCAAAGGCTGGTACCAGGAAGCCAGACGGTCAGGGGAAAGATGACATTCCCTGGGTAGATCTGACAAACAGCCTTATGAATTCCAGGGTAAAGAAAAGGGGCCCTCTCAAAGGGAAGAGCACAGTGACCAAGCTGAGGTCAAGACCTAGATGTCAGACAGACTGCAGCCACCCTGGGCCAATCTGCAAAGGGTCCGATAAGGAGACAATGCTCTGCTCTCAGCTATCCTGGAGGGTGGATGGCCCCAGGCTCCAGGAAGGAGTCCTCTGGGATGCAGGAGGATTGAGCCACCAATCAAAACCAGCAATTCAAACTTGGAAGAGAAGTGCAAAGGCCAAGATAAGGGGAGGGAGAGCTTCTGCATGGGCAGTAAGTCATGTCCTAACACCTGCCGAAGAAAACCAGGGTCATTCAGAAGTTAAAGTGGAGAAGACAAATTTTATTTGGGACCATTGCAATAGGGGGAGAGAGGCCCCAGTGAAGAACTGGGCTCTGTTCTGAGTACCTGGATAAGTGCGGATGCATAGCCAAGGAGCAGGGGGCAGGAGATGGAAAATTGCTAAGATGAGACATCAAATCTGTGGGGAATTCTGGCTGAACCAACCAAACAGGATTCCTGCTGAAGGCAGTCCAGGGTGATCAGATACCAAGGGTGAAGAGTCAAGCATTTTGATCAGATACAGAGGGTGACCGGGTGACAACAATGGGAGATTCTTACTAAACTGCCTTGACAGCATTATTTGCTGAAACTGGATTTTACAAGGAAGCAGACACAGGCCTAGGAGTAGATTCAGAAGCCTGACTAAAGTTTGGCCAAGCAAAGAATCTTTGTCACACCCCAGGAAGTCTCTCCTTGGATCTGGATAGTTCAGAAGCAGAAGAAAAAGGAAACCCTGTCCCCTGACCCAGACTCAGGCAAGTCTAACGTGCACCTCGTGGAGCCATAAAGGAAGCAGGGACTGAGTTGCTGAGAAGGGGAGAGACTCCCTCCTCTCGACGCTGGCCTGTGTCTAAGGCTGCCTGTAAGAAAGGTACTAGGATCACGAAGGAAGCCAGCCTATCACCTGGCTGGGTGAGAAGATGGAGAACACAGAGGCAGAGAAAGCCCTCCTAGCAGCCTGCAGAGCAGGAGTTGTTATGGAGACCGTTCTAGCTGCTCTGCTGTGACAAGGAGTAATTTCATGTCAAGAGCATGCCCTGGAATGGAAGGCAGGGCTGTGGCTCAGAGGACGCGGCTCCCAGTGGAAAGATGGAGGTGGTGAGCCGTGGGGAACGCTCTCTGCCTGCTTTTGGGAGTCCTCCCTGTGTAGCGCCTCATGACCGAGAAAGCAAACACTAGTGGAACTTGGAGCATTGTGGTGAAAATCAGTAGTTTCCAACTGGATGGGATCAAAAAGAAGTTCCTACTTAAACATTTAGCCTCAGAAGTAGATTTTTTAAAACGAAGCCGCAGTTAATGTGCTGATGAACTGAAGATTGAACTTGAGCTTCACATTCTGTCTTTGGCTGTGAACAAATAACAAATAAGTGCTCCCGTTGTATGGGCTCAGCATGTTCTTGGGAGACTGCTTTAAATCTTATTATTTTATAGTCTTCTGCAA</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:lnc-UBL3-2]][[Category:NONHSAG013140]]
+
[[Category:Intergenic]][[Category:lnc-UBL3-2]][[Category:NONHSAG013140]][[Category:ENSG00000266505.1]]

Revision as of 18:44, 15 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000585222.1

Source

Gencode19

Same with

lnc-UBL3-2:1,NONHSAT032760

Classification

intergenic

Length

1780 nt

Genomic location

chr13-:30596158..30597937

Exon number

1

Exons

30596158..30597937

Genome context

Sequence
000001 TCCAGGAGCC TGACCTTTCA TGTGCCAGTG GCTGGGCTCT TATCACTCTC TCAGGCCGCG ATGATGTGCC CTCACATGTG 000080
000081 CTATCAGGGA TGGCTGGTGC GCCAGCTCTG TTACTCCTCA CCCCATAGGG CAGCCCGGGA GGAAGTGAGA CTGGGCCCCA 000160
000161 CCAGCAGGTC AAGTCAGCTT CAAAGGCTGG TACCAGGAAG CCAGACGGTC AGGGGAAAGA TGACATTCCC TGGGTAGATC 000240
000241 TGACAAACAG CCTTATGAAT TCCAGGGTAA AGAAAAGGGG CCCTCTCAAA GGGAAGAGCA CAGTGACCAA GCTGAGGTCA 000320
000321 AGACCTAGAT GTCAGACAGA CTGCAGCCAC CCTGGGCCAA TCTGCAAAGG GTCCGATAAG GAGACAATGC TCTGCTCTCA 000400
000401 GCTATCCTGG AGGGTGGATG GCCCCAGGCT CCAGGAAGGA GTCCTCTGGG ATGCAGGAGG ATTGAGCCAC CAATCAAAAC 000480
000481 CAGCAATTCA AACTTGGAAG AGAAGTGCAA AGGCCAAGAT AAGGGGAGGG AGAGCTTCTG CATGGGCAGT AAGTCATGTC 000560
000561 CTAACACCTG CCGAAGAAAA CCAGGGTCAT TCAGAAGTTA AAGTGGAGAA GACAAATTTT ATTTGGGACC ATTGCAATAG 000640
000641 GGGGAGAGAG GCCCCAGTGA AGAACTGGGC TCTGTTCTGA GTACCTGGAT AAGTGCGGAT GCATAGCCAA GGAGCAGGGG 000720
000721 GCAGGAGATG GAAAATTGCT AAGATGAGAC ATCAAATCTG TGGGGAATTC TGGCTGAACC AACCAAACAG GATTCCTGCT 000800
000801 GAAGGCAGTC CAGGGTGATC AGATACCAAG GGTGAAGAGT CAAGCATTTT GATCAGATAC AGAGGGTGAC CGGGTGACAA 000880
000881 CAATGGGAGA TTCTTACTAA ACTGCCTTGA CAGCATTATT TGCTGAAACT GGATTTTACA AGGAAGCAGA CACAGGCCTA 000960
000961 GGAGTAGATT CAGAAGCCTG ACTAAAGTTT GGCCAAGCAA AGAATCTTTG TCACACCCCA GGAAGTCTCT CCTTGGATCT 001040
001041 GGATAGTTCA GAAGCAGAAG AAAAAGGAAA CCCTGTCCCC TGACCCAGAC TCAGGCAAGT CTAACGTGCA CCTCGTGGAG 001120
001121 CCATAAAGGA AGCAGGGACT GAGTTGCTGA GAAGGGGAGA GACTCCCTCC TCTCGACGCT GGCCTGTGTC TAAGGCTGCC 001200
001201 TGTAAGAAAG GTACTAGGAT CACGAAGGAA GCCAGCCTAT CACCTGGCTG GGTGAGAAGA TGGAGAACAC AGAGGCAGAG 001280
001281 AAAGCCCTCC TAGCAGCCTG CAGAGCAGGA GTTGTTATGG AGACCGTTCT AGCTGCTCTG CTGTGACAAG GAGTAATTTC 001360
001361 ATGTCAAGAG CATGCCCTGG AATGGAAGGC AGGGCTGTGG CTCAGAGGAC GCGGCTCCCA GTGGAAAGAT GGAGGTGGTG 001440
001441 AGCCGTGGGG AACGCTCTCT GCCTGCTTTT GGGAGTCCTC CCTGTGTAGC GCCTCATGAC CGAGAAAGCA AACACTAGTG 001520
001521 GAACTTGGAG CATTGTGGTG AAAATCAGTA GTTTCCAACT GGATGGGATC AAAAAGAAGT TCCTACTTAA ACATTTAGCC 001600
001601 TCAGAAGTAG ATTTTTTAAA ACGAAGCCGC AGTTAATGTG CTGATGAACT GAAGATTGAA CTTGAGCTTC ACATTCTGTC 001680
001681 TTTGGCTGTG AACAAATAAC AAATAAGTGC TCCCGTTGTA TGGGCTCAGC ATGTTCTTGG GAGACTGCTT TAAATCTTAT 001760
001761 TATTTTATAG TCTTCTGCAA
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