Difference between revisions of "ENST00000574306.1"
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==Annotated Information== | ==Annotated Information== | ||
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''MIR22HG'': MIR22 host gene (HGNC nomenclature) | ''MIR22HG'': MIR22 host gene (HGNC nomenclature) | ||
Revision as of 06:29, 25 June 2016
Please input one-sentence summary here.
Contents
Annotated Information
Name
MIR22HG: MIR22 host gene (HGNC nomenclature)
DKFZp686O06159, MGC14376[1]
Function
MIR22HG plays a role in cellular defense mechanisms against specific stressors, and has the potential to be surrogate indicators for cellular stress response[1].
Regulation
Please input regulation information here.
Expression
RT-PCR primer as follows:
| Primer | Forward Primer | Reverse Primer |
|---|---|---|
| MIR22HG | CGGACGCAGTGATTTGCT | GCTTTAGCTGGGTCAGGACA[1] |
Cellular Localization
- nuclear
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
- Research Institute for Environmental Management Technology, National Institute of Advanced Industrial Science and Technology (AIST), 16-1, Onogawa, Tsukuba, Ibaraki 305-8569, Japan[1].
References
Basic Information
| Transcript ID |
ENST00000574306.1 |
| Source |
Gencode19 |
| Same with |
lnc-TLCD2-1:3,MIR22HG,DKFZp686O06159,MGC14376 |
| Classification |
intergenic |
| Length |
2626 nt |
| Genomic location |
chr17-:1614805..1619545 |
| Exon number |
2 |
| Exons |
1614805..1617308,1619424..1619545 |
| Genome context |
|
| Sequence |
000001 AGCTGATCGG AGCCTGGAGC CGGTGTGTGC TGGGTGCCGA GAAGAGACAG CGCCGCCGGC CGTGGGGAGC GGACGCAGTG 000080
000081 ATTTGCTCCC CCTCGTGCAG CAACCCCCAC ACCCAGCACC AGGAGCCTGT TCCTCTCACG CCCTCACCTG GCTGAGCCGC 000160 000161 AGTAGTTCTT CAGTGGCAAG CTTTATGTCC TGACCCAGCT AAAGCTGCCA GTTGAAGAAC TGTTGCCCTC TGCCCCTGGC 000240 000241 TTCGAGGAGG AGGAGGAGCT GCTTTCCCCA TCATCTGGAA GGTGACAGAA ATGGGCTGGG AAGGTCCGAA CAGCAGGGTG 000320 000321 GATGATACGT TTTGGGCAAG TTGGAGAGCC TTTGCCCAGA TTGGCCCAGC AAGGAGCGGT TTTAGATTAG AGACACTGGC 000400 000401 TGGATTGAGG AGTAGAAGGC TCAAACAACC CAAGGTTAGT TGGTCTTTGT GTGACAGTGG GAAGAAGTGG AGAGAACACT 000480 000481 CTGTCTCCCC GACTTCCTTC TTGACCCTCC TTCCGTATCT TTCATTCTTC CCCACTGGCC TTTCCAGATG AGGTCCAAAA 000560 000561 GTAAGCTCAC TCTTCAGGGA AAAGTGATAC TAAACCCAGG CGTGAGGAGT CATCCTTCTG CTCTTACTTT TCCCTGCATT 000640 000641 TCCTTAGGCT GGCCCAGACT CTAGATTCCT GGGCACTTAC CTGTATCTGA GACCCTTAGA CCTCCTGTCT CAGTTTCTCC 000720 000721 ACCTGTGAGA TGGGCAGTCA CACAGATGAG TGTGCATGAG GGAATCAGAA GCCCATCTGG GTTGACTCAG AACCCGGGCT 000800 000801 CTCCCCCTGC TGTGGGTGGA AACAAAACAC CTTTTCACAG AAGCTGTTGT CCCTCCCCCA TCCCTGATAC CATCACCCAG 000880 000881 AAGCTGGGTG GGGAATGGGA AGCTGGAGGA GGGGGTTAGA GTTAGACCAA TGCGAGGAGC TAGTAAGAGC TCGCCTCTCC 000960 000961 GTGACTTCCC CCCATGCAAG GGTGGCCCAA GGCTTCCCCT GATATCCAAA GCAGGACAGC AGCCCCTTGG TGGGATTCTA 001040 001041 ACTGCTGCTA CTCTGTTTCT TTCCTCACTT TGCTTTCCAA GGTGGTATGT GATCCCCAGC TCAGGCCTGT GCAGACAGGA 001120 001121 AATTCTCCCC TGCAGCAAGT AGGGGAGGTG GGTTGTGGGA TGTGACCTCC TTCCAGATAT CAGGCAGTGA GTGTAAACCT 001200 001201 GCCACCTCCA GCCCTGATCC ATTCTCACCT AGCGGCTACA GGAAGCTGTG TCTGTTCGAT TTGGTGGGAG GAGATGTGCA 001280 001281 GGGAGCTGTA TCTTGTCCTC CGCTTGTGAA AAACTCAAGG ATGTGGAGAA GAGTAGACCG TGGAACCCTG CTCTTCTGCA 001360 001361 GCCAAGCTGA GGGGCAGGAT GCGTGTGGGA CAGTGGTAGA GAAGCAGGGG ATAGACTCAT AGGCTGCAAC AAAGGTGACT 001440 001441 CTGTCCCTGG ACACTGCCTC CGTACTTTCT CCTTGCTTCA CTGGCCACAG CATCTCCCTC CAGCCCTCGC TATGTGCCTC 001520 001521 TGCCATCTTC ACCCATCATG GAGCAGAGGT GAGGAGAGGC AGCCTGGGAA TATGGAGACC AGTGAAGGAC CAGGCCTGGA 001600 001601 GAGCACAGGG TCCTACCTGG GCATCCAGCA GAGGAGCCCC TAAAGGCCAG GAGCACCCCA AGAGGAGGGA GGGCAGCCAG 001680 001681 CCTCCATTGA CGGCGAGCCT CCAGCCCTCT CCTACTTTGA TCACCATTTC TCTCCAGGCT TTCTGCCTCC GAGATGTGGC 001760 001761 ACCATAGTGC GGTGCCCTGT GGCTTCACCG CCCTACTTCC ACCTCCGCCC AGCCTGTAAT GTTTATATAA GCAGCCTCAA 001840 001841 GGACCAAGAA CCATCTGCGA AAGGACACAC ACAGGAAATT CATAAAAGAA ATCTGAATGG ATAAAACCAT GAAAAAAAGT 001920 001921 ATGCTTCATT AGTAATTAAA GAAAGGCAAA TAGAGCTGGA AGCATTTTTC CCTTAGCAAA CCATAACAGA AAAAAATAAG 002000 002001 ACCCAATATT GGCAAAGAGA CTACTGAAAA AACATTCCCA TACATTGCGT GTGGGAGTAT ACATCGGTGC AGGCTTCCTG 002080 002081 GATGACAGTT GGGTGATATG TGTCATGTGG CCTAAAAGCC TCCATGTCAT TTGACCTACG AATTCTATCT TTGGGAATTT 002160 002161 ATCCTAAGAA AATACTTAAG GATTTAGTTA GTGATAAGAT GTTCATCCCA GCATTGCAAT GGAGAAAAAT GGGAAGCAAT 002240 002241 GGTTTGGTTG GGAATTTATT CCTTTTCTGC TGTAACGAAA GTTTGCAATA GGGGATTGCT TAAGTAAATT ATTGTATCTC 002320 002321 CATCCAGATG GTGGAGTACC GCGCAGACAT TAAAAGTCAT GTAAAAGAAC ATCTGACTGA AAGAAAAATG CTCCTTGAAT 002400 002401 ATTAAAAGGT TGTAAAAATA GTGCATGTTA TGTGATTTCA ATTTTGTTTT TTAAAATATG GGTGTATGCT TGTATACGTA 002480 002481 GAGCAGATAA AAAAGACGGA AGGCATACTA AAAAATGTTG AGTGGTTATC TTTGTATGGT GGAACAAAGT CACTGTAATT 002560 002561 TTCATCTTTG GTTTTTCTGT AATTTCCAAA TTTTCCACAT TTTGTATTTC ATATAATATA ATTTAA |
