ENST00000476224.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000476224.1 |
Source |
Gencode19 |
Same with |
NONHSAT131551 |
Classification |
intergenic |
Length |
1480 nt |
Genomic location |
chr9+:66553276..66555594 |
Exon number |
3 |
Exons |
66553276..66553558,66553674..66553803,66554528..66555594 |
Genome context |
|
Sequence |
000001 ACTGACTGGG TCACTGGTGA AGTTCCCCGC AGGAACTGAG TCAGACCCCA TCTCAGGGCC CTGCACAAGA TAGGTACCTG 000080
000081 CTCTAAGGCG TGGACCCTCG CCACAGCCCT GGCCCGTCTT GACGGGCGAG GGTTACTGTA CTTGTCCCAA CCGTACAGAT 000160 000161 GAGAAAGCTG AGACTCAGGG CCAGCAACCC GGGTCCCAGC GGAGCGCCCG GCACGCGCCA ACACTTCAGC ACCAGTCGCG 000240 000241 GTGGCCACCA CTGTGCGCGG AGATGGCTGC GACGCGTGCG CAGATCTCGA TCCCAAACTC CCTCCTACCA GAATCTGGAC 000320 000321 CCGAATCCAC CCATTGTCCG TTTTCCGCTG CCGCTGGAGA GAATCTCTGA GGTCCCCAGG AGAGCCTGCC TGCACGGAAG 000400 000401 AGACGCCTCC TCGATTAAAT GCTGTTTTCC ATGACCGTCT CTGTTCTTCC CATACGCGAA TGGCAGGCAT TCAGATCTCC 000480 000481 AAGAATAGAG GATTAGGAGA GACTCCACCA CCTATGTCCT CACAGTTAAT TATCGATTTG TGTCAGTTGC CCATTTTCTC 000560 000561 ACTTCCTGTT TGTGTGTCAA GGGGTATTAA TAAATCTTTG CCTATTTAAA GATATTAGCC TTGGATTTTC AAATATTGCA 000640 000641 TATTTTGACA TGTAAAAATT TGTTAGTTTT ATTTTTTCAA CCGATCTGAC CTGTATAGTT GGGCTTGAGG AAGCTTCCTC 000720 000721 ATTCTACATG TTACTATGGA TTTTCTAATA TTAACACAGG GTTGTATTTT TTCCATATAA CTTTCTATTG AATTTCTTTT 000800 000801 TCCATATGAT AGGTGGTGAA GGTTTAGCCC AGTAAAGCAG AGAGGTTAAG AGGTTAGATT GGGGGCTCTG GAGCCAGACC 000880 000881 TGTGTAGATC TGAGTCCTGG CTCTGGCACT TGAAAGCCGT GTGACCTTGG TTAAGATACT TAGTCCCTCT CTGCCAAATG 000960 000961 GAGAAATAAG GGCACCTACC CCATAGGGTA GTTGTGTGAT TACACAAGTT AATACACTTC AATCAGTAGC AAGAAAGTGA 001040 001041 ATGTCAAGCT GTATTTGTTC AGGCAGCCAT ATGGTAGCCC CACGTCCTTA GTAAACTGAG GTATTGAAGT ATCTTCTTTT 001120 001121 TCTTTCAGAA AATATTTGTC AAGCACCTTC TGTGTTCAAA GAACTGTTCT AGAGCTTTAC ATGCTATGGA GGTCTAGAAA 001200 001201 TTCACATTAT GGTGGCAGGT GACAGACAAT ACAAAGAGAT AAAGCAATTT TATATAGTGA TAAGCTAGGG AGGAGTGCTA 001280 001281 AAAGGAGCCA AGGTGTAGTG GTGACTGGAA GGTGACCAGG GAAACCACTG TAGGGTTTCT AAGTGATGAG ATCTGTGACA 001360 001361 AATCCCTGTG GTCAGCAGCA GGCATTGGAT ATGTAACTTT ATTCTGTCCC ATTGATCTTG TAGTCAACCC TGGTCTGTTC 001440 001441 TGTATTGTTT TAATTACATA ATCTTTGTAA TAATCTTTAA |
Predicted Small Protein
Name | ENST00000476224.1_smProtein_158:433 |
Length | 92 |
Molecular weight | 10396.8625 |
Aromaticity | 0.0549450549451 |
Instability index | 86.4901098901 |
Isoelectric point | 11.8500366211 |
Runs | 15 |
Runs residual | 0.0313644688645 |
Runs probability | 0.0425366543014 |
Amino acid sequence | MRKLRLRASNPGPSGAPGTRQHFSTSRGGHHCARRWLRRVRRSRSQTPSYQNLDPNPPIV RFPLPLERISEVPRRACLHGRDASSIKCCFP |
Secondary structure | LLEEEEELLLLLLLLLLLLLLEEELLLLLHHHHHHHHHHHHHHLLLLLLLLLLLLLLLEE ELLLLHHHLLLLLHHHHLLLLLLLLLEEELL |
PRMN | - |
PiMo | - |