ENST00000476224.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000476224.1

Source

Gencode19

Same with

NONHSAT131551

Classification

intergenic

Length

1480 nt

Genomic location

chr9+:66553276..66555594

Exon number

3

Exons

66553276..66553558,66553674..66553803,66554528..66555594

Genome context

Sequence
000001 ACTGACTGGG TCACTGGTGA AGTTCCCCGC AGGAACTGAG TCAGACCCCA TCTCAGGGCC CTGCACAAGA TAGGTACCTG 000080
000081 CTCTAAGGCG TGGACCCTCG CCACAGCCCT GGCCCGTCTT GACGGGCGAG GGTTACTGTA CTTGTCCCAA CCGTACAGAT 000160
000161 GAGAAAGCTG AGACTCAGGG CCAGCAACCC GGGTCCCAGC GGAGCGCCCG GCACGCGCCA ACACTTCAGC ACCAGTCGCG 000240
000241 GTGGCCACCA CTGTGCGCGG AGATGGCTGC GACGCGTGCG CAGATCTCGA TCCCAAACTC CCTCCTACCA GAATCTGGAC 000320
000321 CCGAATCCAC CCATTGTCCG TTTTCCGCTG CCGCTGGAGA GAATCTCTGA GGTCCCCAGG AGAGCCTGCC TGCACGGAAG 000400
000401 AGACGCCTCC TCGATTAAAT GCTGTTTTCC ATGACCGTCT CTGTTCTTCC CATACGCGAA TGGCAGGCAT TCAGATCTCC 000480
000481 AAGAATAGAG GATTAGGAGA GACTCCACCA CCTATGTCCT CACAGTTAAT TATCGATTTG TGTCAGTTGC CCATTTTCTC 000560
000561 ACTTCCTGTT TGTGTGTCAA GGGGTATTAA TAAATCTTTG CCTATTTAAA GATATTAGCC TTGGATTTTC AAATATTGCA 000640
000641 TATTTTGACA TGTAAAAATT TGTTAGTTTT ATTTTTTCAA CCGATCTGAC CTGTATAGTT GGGCTTGAGG AAGCTTCCTC 000720
000721 ATTCTACATG TTACTATGGA TTTTCTAATA TTAACACAGG GTTGTATTTT TTCCATATAA CTTTCTATTG AATTTCTTTT 000800
000801 TCCATATGAT AGGTGGTGAA GGTTTAGCCC AGTAAAGCAG AGAGGTTAAG AGGTTAGATT GGGGGCTCTG GAGCCAGACC 000880
000881 TGTGTAGATC TGAGTCCTGG CTCTGGCACT TGAAAGCCGT GTGACCTTGG TTAAGATACT TAGTCCCTCT CTGCCAAATG 000960
000961 GAGAAATAAG GGCACCTACC CCATAGGGTA GTTGTGTGAT TACACAAGTT AATACACTTC AATCAGTAGC AAGAAAGTGA 001040
001041 ATGTCAAGCT GTATTTGTTC AGGCAGCCAT ATGGTAGCCC CACGTCCTTA GTAAACTGAG GTATTGAAGT ATCTTCTTTT 001120
001121 TCTTTCAGAA AATATTTGTC AAGCACCTTC TGTGTTCAAA GAACTGTTCT AGAGCTTTAC ATGCTATGGA GGTCTAGAAA 001200
001201 TTCACATTAT GGTGGCAGGT GACAGACAAT ACAAAGAGAT AAAGCAATTT TATATAGTGA TAAGCTAGGG AGGAGTGCTA 001280
001281 AAAGGAGCCA AGGTGTAGTG GTGACTGGAA GGTGACCAGG GAAACCACTG TAGGGTTTCT AAGTGATGAG ATCTGTGACA 001360
001361 AATCCCTGTG GTCAGCAGCA GGCATTGGAT ATGTAACTTT ATTCTGTCCC ATTGATCTTG TAGTCAACCC TGGTCTGTTC 001440
001441 TGTATTGTTT TAATTACATA ATCTTTGTAA TAATCTTTAA
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Predicted Small Protein

Name ENST00000476224.1_smProtein_158:433
Length 92
Molecular weight 10396.8625
Aromaticity 0.0549450549451
Instability index 86.4901098901
Isoelectric point 11.8500366211
Runs 15
Runs residual 0.0313644688645
Runs probability 0.0425366543014
Amino acid sequence MRKLRLRASNPGPSGAPGTRQHFSTSRGGHHCARRWLRRVRRSRSQTPSYQNLDPNPPIV
RFPLPLERISEVPRRACLHGRDASSIKCCFP
Secondary structure LLEEEEELLLLLLLLLLLLLLEEELLLLLHHHHHHHHHHHHHHLLLLLLLLLLLLLLLEE
ELLLLHHHLLLLLHHHHLLLLLLLLLEEELL
PRMN -
PiMo -