Difference between revisions of "ENST00000434974.1"
| Line 42: | Line 42: | ||
sequence = <dnaseq>CATTTTCCCTTGGCTGAGGAAACGATGGTTTGGTTTTGCAAAGGAATGCTGGGGACTTCTGCCAGCTTGCTAACGGCCTTGCCCCATTCAGATGCATCGAACTCACAGAACATCGCTCCCCAGCTGCTGGCTCGCGGTTCTGAGAGTGCCTGAATAGAAAACCACTCATTTCCCTTCGCAAAAGAGGCGCCCAAAGCAGATATTTCAATATATTCCAATTTAGCCGAGGGAAGCCAGAACATGGATGTTGTTGCCAAGGAAACCACCTCCTTCCTCCTGTGTGCTGTGCATACGTGTATCACTTCATCTCTCTGCTCTCCAAGCTTGAATCTAGATCTGACGTGGATATCCTGCCACAGTTCCGAAGTCTACCTAGTGCCCCAGCCGAACCTGCCCTGGCTCCTAGGTGGGGTATGGACATCTGTGACATCCCTCCCCAACACCCCACCAAGCTGGGCTGCAAGACGGGTTATGGTGGCCCCATGACTTCCTTCCTTGGTAAGCCACAGGACTTCCTTGTTAACTGCTTTGCTGTTGGTCATTGCAGAGAAATAGGGAACAATAAAAACAACCTGAGGTGTGGCAAAGGCTCTAGGACTGCATCATCTGCTGAAGCTCCAGTCCCTGCGCTGCATCTCCTGAGTGGCATCTGTGATGGCAAACAAAGGCTCCTTGGGCTTCACGCTCTGCTTTCTTTCTAAGTGGTACTTACCACCCGCTGCATCCCAGCCTTCTTCTGACCAGCTTCCTCTTCTGATAGGCTTATTTCCATGAAGTTTTTCAGAGTTAGAAGCATGAACTTTAGAACCAGATGATCCCGGTTGGAATCCATCTCTGGCACTTGCTATATGACCTTGGATAAGTTACTTAACCTTTCTGTGTCTCAGTTTCTTTTTCTATAAAATGGGCATAATAAAATCTATCTAGCATAGTTATTGTAAGGATTAAGTAAGTTATTATATGCAGAGCTCTTGGTTCACAGTTAGTGCCATTTAAGCCTTTCTGTCATTCTTACTGTTACCATTTTCCTGGCATGTCAGTCTGATGATGCAGACGAGGCAGGAACTTTCGTCTCTGCCTCTCGTGGACTGCCCAATCAGCTCCACGGAACTCAGCCATGCCTGCAGTGCTGCAGGCCTCGCTTTGGACTGCTGGAGGCTGAGAAGTCAATGGATGTTGCTTGGGCATTTTGGGGGGTTTCCTTATGCAGGAGGAAGATGACAATCATTGTGGAAGCAGAAGGTTGTCATGGAAATGCACCTGTTCCAAGTCATTGCACCCTGGGCTCTGGGCTGGCTCTGCACGGGCCTGCCATGCACTGACTTCAGCTTCATCTGAGTCAGTGGAAGGCTGGACAAAGGTAGACATCTTTCCTCACTGCCAGCCTGCCATTGCGGCTTTCTGTCTCTGGTGTGAACAGGCAATCGAGCTTTCCTGGTCTCCTGAGCTACTGTGAACGTGGCAGAAGATAGTGGACTCTGAATAACATTGGAAACAACTACTTCCTGGACGGCCACTGTGTGCATGGCCTGCGGGAGGGTGAGGGCAAGAGGACTGATGGTTACTGGGAATCTTCTTCATGGCCAGGCTTCTGTGTGTCCTCTCACTTAATCCTCCAACAGCACTGTGAGGAAAATACAGCATCCCACCTCACAGGCGAGGAAGCTTAAGTTGAAGGAATGTTAAATTGCCTGCTCTGAGCCTCACAGCCGGGAGGTGACAGCCCCAGGATTGGCGGCCAGGGTTTGTCTGCCTTTAAAACTTATGTCATGTCCTTCTGTGTTATCTCGGTCTGTACAGGCTGCTACAGCAAAATACCATAGCCTGGGTAGTTTATGAACAACAGAAATTTATTTCTCATAGTTCTGGAGCCTGGAAGTCCAAGATCAAGGCTCTCGCAGGTTCAGTGTTCGGTGAGGACCCACTTCCTTATTCATAGACGTCCCCTTCTCACTGTGGCCTCACAGCAAGGGGTCAGGGTTCTCTCTGGGGCCTCTTTAAATAGGGTCACCAATCCCATTCATGAGGGCTGTACCCCCATGACCTAATCCCCTCCCAAAGGCCCCACTTCCCCATACCATCACCTTGGGGGTTAGGATTCTAACATGAATTTTGGGGGGACACAGGCATTCTGATCATAGCATATGTGTAGTTGCTCCTGGCCCGCTGGGGAAATCACCGTCTCCAAGCATGGCTCCCATCTGGTTACCCTGGGTGGCCAAGGTCAGCAGAGGTGCTTTGCCAACTGATTGGCACCCACACTACTTCTGTCCAGGTGGGCTGGGGCGAGGGTTGGGTCACAGTGGGACTCTGTGGGGCTCCGGGGACTGTCAGCTGCCCCGGGGCTGGAGGTCCTGCTGCTCTGTGCCCATAGGCACCTCCTGGGAATCTGGCGACTTGCATCAGGGCCCGGAACTCACCCTGACAGTTCTTTCAGCTCTTGTCTTTTCCTCCCCTACCTACCTGCTCATCTCGCTTTCACACACAAAGCCTCCCCTGCACTCCCCGCTCCCCTCCTCAATCCCTTTCCCGGCTTTTGTACTTTATGATGCCGTGACTTGGGTGAGGAAACTCATTAAAGTCATTATTCCGTGCACAGAAATGTGTCTTTCATCCCATTCATATTTAATGTTCCTCCCACTTGATCTTTTGATGCTTTTTAATTCTTGATATTACATGACATACACACACA</dnaseq>| | sequence = <dnaseq>CATTTTCCCTTGGCTGAGGAAACGATGGTTTGGTTTTGCAAAGGAATGCTGGGGACTTCTGCCAGCTTGCTAACGGCCTTGCCCCATTCAGATGCATCGAACTCACAGAACATCGCTCCCCAGCTGCTGGCTCGCGGTTCTGAGAGTGCCTGAATAGAAAACCACTCATTTCCCTTCGCAAAAGAGGCGCCCAAAGCAGATATTTCAATATATTCCAATTTAGCCGAGGGAAGCCAGAACATGGATGTTGTTGCCAAGGAAACCACCTCCTTCCTCCTGTGTGCTGTGCATACGTGTATCACTTCATCTCTCTGCTCTCCAAGCTTGAATCTAGATCTGACGTGGATATCCTGCCACAGTTCCGAAGTCTACCTAGTGCCCCAGCCGAACCTGCCCTGGCTCCTAGGTGGGGTATGGACATCTGTGACATCCCTCCCCAACACCCCACCAAGCTGGGCTGCAAGACGGGTTATGGTGGCCCCATGACTTCCTTCCTTGGTAAGCCACAGGACTTCCTTGTTAACTGCTTTGCTGTTGGTCATTGCAGAGAAATAGGGAACAATAAAAACAACCTGAGGTGTGGCAAAGGCTCTAGGACTGCATCATCTGCTGAAGCTCCAGTCCCTGCGCTGCATCTCCTGAGTGGCATCTGTGATGGCAAACAAAGGCTCCTTGGGCTTCACGCTCTGCTTTCTTTCTAAGTGGTACTTACCACCCGCTGCATCCCAGCCTTCTTCTGACCAGCTTCCTCTTCTGATAGGCTTATTTCCATGAAGTTTTTCAGAGTTAGAAGCATGAACTTTAGAACCAGATGATCCCGGTTGGAATCCATCTCTGGCACTTGCTATATGACCTTGGATAAGTTACTTAACCTTTCTGTGTCTCAGTTTCTTTTTCTATAAAATGGGCATAATAAAATCTATCTAGCATAGTTATTGTAAGGATTAAGTAAGTTATTATATGCAGAGCTCTTGGTTCACAGTTAGTGCCATTTAAGCCTTTCTGTCATTCTTACTGTTACCATTTTCCTGGCATGTCAGTCTGATGATGCAGACGAGGCAGGAACTTTCGTCTCTGCCTCTCGTGGACTGCCCAATCAGCTCCACGGAACTCAGCCATGCCTGCAGTGCTGCAGGCCTCGCTTTGGACTGCTGGAGGCTGAGAAGTCAATGGATGTTGCTTGGGCATTTTGGGGGGTTTCCTTATGCAGGAGGAAGATGACAATCATTGTGGAAGCAGAAGGTTGTCATGGAAATGCACCTGTTCCAAGTCATTGCACCCTGGGCTCTGGGCTGGCTCTGCACGGGCCTGCCATGCACTGACTTCAGCTTCATCTGAGTCAGTGGAAGGCTGGACAAAGGTAGACATCTTTCCTCACTGCCAGCCTGCCATTGCGGCTTTCTGTCTCTGGTGTGAACAGGCAATCGAGCTTTCCTGGTCTCCTGAGCTACTGTGAACGTGGCAGAAGATAGTGGACTCTGAATAACATTGGAAACAACTACTTCCTGGACGGCCACTGTGTGCATGGCCTGCGGGAGGGTGAGGGCAAGAGGACTGATGGTTACTGGGAATCTTCTTCATGGCCAGGCTTCTGTGTGTCCTCTCACTTAATCCTCCAACAGCACTGTGAGGAAAATACAGCATCCCACCTCACAGGCGAGGAAGCTTAAGTTGAAGGAATGTTAAATTGCCTGCTCTGAGCCTCACAGCCGGGAGGTGACAGCCCCAGGATTGGCGGCCAGGGTTTGTCTGCCTTTAAAACTTATGTCATGTCCTTCTGTGTTATCTCGGTCTGTACAGGCTGCTACAGCAAAATACCATAGCCTGGGTAGTTTATGAACAACAGAAATTTATTTCTCATAGTTCTGGAGCCTGGAAGTCCAAGATCAAGGCTCTCGCAGGTTCAGTGTTCGGTGAGGACCCACTTCCTTATTCATAGACGTCCCCTTCTCACTGTGGCCTCACAGCAAGGGGTCAGGGTTCTCTCTGGGGCCTCTTTAAATAGGGTCACCAATCCCATTCATGAGGGCTGTACCCCCATGACCTAATCCCCTCCCAAAGGCCCCACTTCCCCATACCATCACCTTGGGGGTTAGGATTCTAACATGAATTTTGGGGGGACACAGGCATTCTGATCATAGCATATGTGTAGTTGCTCCTGGCCCGCTGGGGAAATCACCGTCTCCAAGCATGGCTCCCATCTGGTTACCCTGGGTGGCCAAGGTCAGCAGAGGTGCTTTGCCAACTGATTGGCACCCACACTACTTCTGTCCAGGTGGGCTGGGGCGAGGGTTGGGTCACAGTGGGACTCTGTGGGGCTCCGGGGACTGTCAGCTGCCCCGGGGCTGGAGGTCCTGCTGCTCTGTGCCCATAGGCACCTCCTGGGAATCTGGCGACTTGCATCAGGGCCCGGAACTCACCCTGACAGTTCTTTCAGCTCTTGTCTTTTCCTCCCCTACCTACCTGCTCATCTCGCTTTCACACACAAAGCCTCCCCTGCACTCCCCGCTCCCCTCCTCAATCCCTTTCCCGGCTTTTGTACTTTATGATGCCGTGACTTGGGTGAGGAAACTCATTAAAGTCATTATTCCGTGCACAGAAATGTGTCTTTCATCCCATTCATATTTAATGTTCCTCCCACTTGATCTTTTGATGCTTTTTAATTCTTGATATTACATGACATACACACACA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:ENSG00000230417.6]][[Category:lnc-RPS24-3]][[Category:Transcripts]] | + | [[Category:Intergenic]][[Category:ENSG00000230417.6]][[Category:lnc-RPS24-3]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 15:30, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
ENST00000434974.1 |
| Source |
Gencode19 |
| Same with |
lnc-RPS24-3:3 |
| Classification |
intergenic |
| Length |
2692 nt |
| Genomic location |
chr10+:80008505..80012402 |
| Exon number |
2 |
| Exons |
80008505..80008827,80010034..80012402 |
| Genome context |
|
| Sequence |
000001 CATTTTCCCT TGGCTGAGGA AACGATGGTT TGGTTTTGCA AAGGAATGCT GGGGACTTCT GCCAGCTTGC TAACGGCCTT 000080
000081 GCCCCATTCA GATGCATCGA ACTCACAGAA CATCGCTCCC CAGCTGCTGG CTCGCGGTTC TGAGAGTGCC TGAATAGAAA 000160 000161 ACCACTCATT TCCCTTCGCA AAAGAGGCGC CCAAAGCAGA TATTTCAATA TATTCCAATT TAGCCGAGGG AAGCCAGAAC 000240 000241 ATGGATGTTG TTGCCAAGGA AACCACCTCC TTCCTCCTGT GTGCTGTGCA TACGTGTATC ACTTCATCTC TCTGCTCTCC 000320 000321 AAGCTTGAAT CTAGATCTGA CGTGGATATC CTGCCACAGT TCCGAAGTCT ACCTAGTGCC CCAGCCGAAC CTGCCCTGGC 000400 000401 TCCTAGGTGG GGTATGGACA TCTGTGACAT CCCTCCCCAA CACCCCACCA AGCTGGGCTG CAAGACGGGT TATGGTGGCC 000480 000481 CCATGACTTC CTTCCTTGGT AAGCCACAGG ACTTCCTTGT TAACTGCTTT GCTGTTGGTC ATTGCAGAGA AATAGGGAAC 000560 000561 AATAAAAACA ACCTGAGGTG TGGCAAAGGC TCTAGGACTG CATCATCTGC TGAAGCTCCA GTCCCTGCGC TGCATCTCCT 000640 000641 GAGTGGCATC TGTGATGGCA AACAAAGGCT CCTTGGGCTT CACGCTCTGC TTTCTTTCTA AGTGGTACTT ACCACCCGCT 000720 000721 GCATCCCAGC CTTCTTCTGA CCAGCTTCCT CTTCTGATAG GCTTATTTCC ATGAAGTTTT TCAGAGTTAG AAGCATGAAC 000800 000801 TTTAGAACCA GATGATCCCG GTTGGAATCC ATCTCTGGCA CTTGCTATAT GACCTTGGAT AAGTTACTTA ACCTTTCTGT 000880 000881 GTCTCAGTTT CTTTTTCTAT AAAATGGGCA TAATAAAATC TATCTAGCAT AGTTATTGTA AGGATTAAGT AAGTTATTAT 000960 000961 ATGCAGAGCT CTTGGTTCAC AGTTAGTGCC ATTTAAGCCT TTCTGTCATT CTTACTGTTA CCATTTTCCT GGCATGTCAG 001040 001041 TCTGATGATG CAGACGAGGC AGGAACTTTC GTCTCTGCCT CTCGTGGACT GCCCAATCAG CTCCACGGAA CTCAGCCATG 001120 001121 CCTGCAGTGC TGCAGGCCTC GCTTTGGACT GCTGGAGGCT GAGAAGTCAA TGGATGTTGC TTGGGCATTT TGGGGGGTTT 001200 001201 CCTTATGCAG GAGGAAGATG ACAATCATTG TGGAAGCAGA AGGTTGTCAT GGAAATGCAC CTGTTCCAAG TCATTGCACC 001280 001281 CTGGGCTCTG GGCTGGCTCT GCACGGGCCT GCCATGCACT GACTTCAGCT TCATCTGAGT CAGTGGAAGG CTGGACAAAG 001360 001361 GTAGACATCT TTCCTCACTG CCAGCCTGCC ATTGCGGCTT TCTGTCTCTG GTGTGAACAG GCAATCGAGC TTTCCTGGTC 001440 001441 TCCTGAGCTA CTGTGAACGT GGCAGAAGAT AGTGGACTCT GAATAACATT GGAAACAACT ACTTCCTGGA CGGCCACTGT 001520 001521 GTGCATGGCC TGCGGGAGGG TGAGGGCAAG AGGACTGATG GTTACTGGGA ATCTTCTTCA TGGCCAGGCT TCTGTGTGTC 001600 001601 CTCTCACTTA ATCCTCCAAC AGCACTGTGA GGAAAATACA GCATCCCACC TCACAGGCGA GGAAGCTTAA GTTGAAGGAA 001680 001681 TGTTAAATTG CCTGCTCTGA GCCTCACAGC CGGGAGGTGA CAGCCCCAGG ATTGGCGGCC AGGGTTTGTC TGCCTTTAAA 001760 001761 ACTTATGTCA TGTCCTTCTG TGTTATCTCG GTCTGTACAG GCTGCTACAG CAAAATACCA TAGCCTGGGT AGTTTATGAA 001840 001841 CAACAGAAAT TTATTTCTCA TAGTTCTGGA GCCTGGAAGT CCAAGATCAA GGCTCTCGCA GGTTCAGTGT TCGGTGAGGA 001920 001921 CCCACTTCCT TATTCATAGA CGTCCCCTTC TCACTGTGGC CTCACAGCAA GGGGTCAGGG TTCTCTCTGG GGCCTCTTTA 002000 002001 AATAGGGTCA CCAATCCCAT TCATGAGGGC TGTACCCCCA TGACCTAATC CCCTCCCAAA GGCCCCACTT CCCCATACCA 002080 002081 TCACCTTGGG GGTTAGGATT CTAACATGAA TTTTGGGGGG ACACAGGCAT TCTGATCATA GCATATGTGT AGTTGCTCCT 002160 002161 GGCCCGCTGG GGAAATCACC GTCTCCAAGC ATGGCTCCCA TCTGGTTACC CTGGGTGGCC AAGGTCAGCA GAGGTGCTTT 002240 002241 GCCAACTGAT TGGCACCCAC ACTACTTCTG TCCAGGTGGG CTGGGGCGAG GGTTGGGTCA CAGTGGGACT CTGTGGGGCT 002320 002321 CCGGGGACTG TCAGCTGCCC CGGGGCTGGA GGTCCTGCTG CTCTGTGCCC ATAGGCACCT CCTGGGAATC TGGCGACTTG 002400 002401 CATCAGGGCC CGGAACTCAC CCTGACAGTT CTTTCAGCTC TTGTCTTTTC CTCCCCTACC TACCTGCTCA TCTCGCTTTC 002480 002481 ACACACAAAG CCTCCCCTGC ACTCCCCGCT CCCCTCCTCA ATCCCTTTCC CGGCTTTTGT ACTTTATGAT GCCGTGACTT 002560 002561 GGGTGAGGAA ACTCATTAAA GTCATTATTC CGTGCACAGA AATGTGTCTT TCATCCCATT CATATTTAAT GTTCCTCCCA 002640 002641 CTTGATCTTT TGATGCTTTT TAATTCTTGA TATTACATGA CATACACACA CA |
