ENST00000309874.2

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

ENST00000309874.2

Source

Gencode19

Same with

lnc-JMJD7-PLA2G4B-1:2

Classification

antisense

Length

2900 nt

Genomic location

chr15+:42184991..42188133

Exon number

2

Exons

42184991..42187534,42187778..42188133

Genome context

Sequence
000001 GTTCTGCCCA GTGGCCTGGC GCAGGAAAGG TGACCCAGTA GTTCAGCCTG TCCCAGCTGC CTGCCCCAGC ACCATCCCAG 000080
000081 ACCCCTTTCC CTGGGGCCCA CCTTGGCCCT GAGGAAGGCC AGAGCTCGGC TGCTGTTCTC CAGGAAGTGC ACACGCAGGC 000160
000161 GGCCCCGGCT CGGGGGTGGC AGGGCCTCCC CTGAGATGAG CTCCAGCAGC CGCAGGAGGT GGATGCCGTC AGCCAGCTCT 000240
000241 GTGTACAGGT TCCGGATCTT GATGCCCGCC TGGGGAGGGG ACAGGGGTAA GTATGGGGTC AGCCCAGCCT CACCTGTCCT 000320
000321 CCCATCCTGG GACCTGAGAG GTACGACCCA GAGCAGCTGC TTTGGAAGAA GGAGCTCTGG CCTCAGCTTG GCCTCAGGCA 000400
000401 GATGACCCCA CAGCTCACCC CGGAGGCCCA CTGGCCAGAG CTGGGGGCCT GGTATGGGTG GGCTGTGGGT CACAGCTGGC 000480
000481 TATACTCACC TGGCCGCACT GGAAGACGTT ATTGATCCAC TTGGTGAAAG TCTTCTCCTG CATCTGCATG TGCCGGGCCT 000560
000561 GTAGCTTGCG AATGTGGCCC GTCTCGTACT GAGAGTCCAT GGTGAGACTT GGACTGGGCG GGACCCGGAG TTCTGTGCTG 000640
000641 GGCCTCCTGC TGCGGTGCCC TGCAGCCCCG AGGAGCTCCC GGGGACTGTG GGGCTGACCA GCCATCAGCC CTGCAGACTT 000720
000721 TGGGGATGAG GAGCTGCTGG ATGGCTCCCT AAACCTGGAG GGCATGCAGA TTAGGGGATG ATGTGAATGG AGATGGCCCC 000800
000801 TCTACCAGGG GCCTGGGGTC CCGCCTTGCC AGACTGTCCT CACATTTCAT GGGGGTTGCA GCTTGGAGCC CAGCCAGGTA 000880
000881 AGGGCCAGTG CTTCTGGTCC CCTGTGCTTG AATGGCCCAG GGCCCCCTTT GCCCCACCCC ACCTTCCAGA TTCTTCTTCT 000960
000961 CAGAGCCCCT GCTGCCAGGT CCCTCCACCA CAGTGACTGG GACAGGTGGA AGGAAGACAG GAAACTGCTT ACCTTGGTGA 001040
001041 TGCCTGGGTC CCACAGAGAC GGCTCTGCTG GACGGATGGA GATGGTAGAT AGCAGGGGCT GCTTACCTTG GTGATGCCTG 001120
001121 GGTTCCACAG AGGCGGCCCA GCTGGACGGA TGGAGATGGC AGATAGCAGG GGCTGTGGAG GGAGGGAGAG GGACATCAGG 001200
001201 AGAGGCCAAG GCTGGAGCAG GGCTGCACCA CAGCCCTCCC CTTGAGCCAG CGTGCTGGGG TGACGGCACA CAGGCGGCAT 001280
001281 TGTCCTCCCA CCTGCCACAG GGCGTGGCCC AGACAGGGAG GGGGTGGTTC AGGAATGCTC CAGGGCCATT GCCAGATGAT 001360
001361 GTCCTCCTTC ATCATCCTCC CTTCCCCGCC AGCAACTTCT CCAACTCCAG GTGGGGGTCC TGGCTCCCAG GACGCAGAGG 001440
001441 CCCATGGAGC GGCCCTGCCA CCGCATGGGG TGCTGCAGTC TGCGTAGGAG GTACCAAAGG GCAGAGCCTC TGTGGGAAGC 001520
001521 CTGTGGACGC ACTTCCCAAT CTGAGACTGC CCTCTGTACC CTCTTGGGGC CTCTCTGTGA GCACCCAGGG CGAGGGGATG 001600
001601 AGGGAGCGTC CTGGGCCGTG GTCTTCTCAT TCACCCCCAG GGAACAGCCC ATAGACTGAG GGCCTCACAG ACCCTGGGCT 001680
001681 TGGCTTTCCA GGCCCTGCCA GAGTGCAGCC TGCCTAGCCC GGGGCTGAAG GGTAGGCTCC CTGGAGGAAG GGGTGACCTG 001760
001761 GAACTGCGAG GGCTGTGGAG TCTCCTCCAA AATTAGAGAC ACGGTGTTAA CTCTGGGCTC CACAGAGCTG GCCGTGGCCC 001840
001841 GGGGCTCGGA GGCAGGGGTG CAGAGGGAGC TGGTGGGCGC CCATCCCTTC CTCCCCGAGC AGCCGTGGAC TACATGCCAG 001920
001921 AGTGAAGGCG AGTTCTAATT CTGGGGGTCT CACCCGCCTC TGGCTAAACT CAGGGTAGCA GTGTGGGCTG GGGTGTGTGT 002000
002001 GTGTGGGTGT CTTCCAGCGG CCCTGGAGCC TCTGAAGCGA CAGCCCGCTC CTCAGGGAGG CGCTCCTGGC AGCCACAGCC 002080
002081 CACAGCAGGA CAGCCGCTCA GCGCGCCCTT GAGAGCTGGG CTAGGGATGA GTCACACTTG AACCGCCTGG GCCCACTGCA 002160
002161 GGCAGTCAGG GGTGACGCTG AGAGGTGCCG TGGTCTCGGG TGGGGTGCGG CTTCCTGCGT CTGAGAGACG CTTCCTCTCC 002240
002241 TGCTGTCCTC TCCCTGCCAG GCCCCTTCTG CAGCGGCTGG CTTCCAGACA CCCTGCGTCC CTCCCTTGCT CGCAGCAGTT 002320
002321 GCTGTGGCGG TCCTCCCGTG CACCCCCCCT TCTGCCCTCA CTGCCCCTGG GGGTCCTCAT CACGGACCCC CTAACTCGGC 002400
002401 ATCCTGGACA CCACCACCCC GCACCTTTCC ACAGTGCAGC TCTGCTCGTG CCTGTGAAGC CTCCCACAGC CTGGGAAGGA 002480
002481 AAATCCAGAC TTGCCAGACC TTGCCTCAGC CAGGCCTTGG AAGCCTGCCA GCTTACCTAA CCAGTAAGAC CCTCAGCCCA 002560
002561 TGGAGTCCTG TGTGATGTTG TGAGCGTGGG AGGACAGACT GAACTGCTCG GCCCGTGGAG TCCTGTGTGA TGTTGTGAGC 002640
002641 GGGGAGGACA GACTGAACTG CGTGGTGCTT CGCACATAGA CCTCAACAGG GATTGGCATT TTGAAGCTGT TGGCGGGGGC 002720
002721 TGTGGACTGC TTTTCTTCCT TTCTAGCTCA ACGGCAGCTA AAGCCACTGC ATACAATGCA AGGACTGGCT CCTGTTTGGC 002800
002801 CACGACTGAT TGCAGCCCCT GGTGAAATGA GAACCCTGTG GGTCGGAACA AAGTTTGGAT TATTTATGTT GCAAGTAACT 002880
002881 AAAATCTCAA GTGAAACTGG
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Predicted Small Protein

Name ENST00000309874.2_smProtein_1334:1486
Length 51
Molecular weight 4935.5524
Aromaticity 0.02
Instability index 91.82
Isoelectric point 5.70074462891
Runs 7
Runs residual 0.0246783625731
Runs probability 0.0422943952355
Amino acid sequence MLQGHCQMMSSFIILPSPPATSPTPGGGPGSQDAEAHGAALPPHGVLQSA
Secondary structure LLLLHHHHLLLEEELLLLLLLLLLLLLLLLHHHHHHHLLLLLLLLLLLLL
PRMN -
PiMo -