Difference between revisions of "DBH-AS1"

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(Created page with "==Annotated Information== ===Approved Symbol=== DBH-AS1 ===Approved Name=== DBH antisense RNA 1 ===Previous Symbols=== NCRNA00118 ===Synonyms=== BPR ===Chromosome=== 9q34.2 ==...")
 
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Latest revision as of 05:58, 23 June 2016

Annotated Information

Approved Symbol

DBH-AS1

Approved Name

DBH antisense RNA 1

Previous Symbols

NCRNA00118

Synonyms

BPR

Chromosome

9q34.2

RefSeq ID

NR_002783

OMIM ID

_

Ensembl ID

ENSG00000225756

pubmed IDs

10686491, 26393879

Sequence

>gi|84872064|ref|NR_002783.1| Homo sapiens BPR (LOC138948) on chromosome 9

000001 CTCTCTCCCT CTCCCTCTCT CCCTCTCCCT CTCTCCTCTC TCTCCTCTCT CCTCTCTCTC CTCTCTCCTC TCTCTCCTCT 000080
000081 CTCCTCTCTC TCTGCTGGCT GGCTGGCTGT CTAGGCCTAT GTGTCACCAC CTGGCACTTG CTCTCATTGT CTTGTGCGAG 000160
000161 TGCTTTTGCC AGCAGTTTGG AGTGCAGACC CATCACCCCT CACTGGGGCC CCCCATGAGG CCTGCCTGAC TGCATGCCCC 000240
000241 ACCCGGGCCC ATGGCAGCGC ACCTGGAAGC GGACGGCTGA GGACTTGTTG CAGTGCATGG AGATGGGCGC GAAGCTGTAC 000320
000321 AGGGCCTTCA GTACGTCGCG GTTGAAGGAG TTCCAGGGAA CAGAGGTGAA CTGCTGAGAC ACGGACGCCT GAGGGCAGGT 000400
000401 GCAGACATCC TCGTTGTTGA ACCTGGCGGG GACAAGGAAC AGCCAGGCTG GGGAGCAGCT GACGGGCAGG GAGCCCAGTG 000480
000481 GGCACCAGCA ACACCTCCCT GCAACTCGAG TCCTGTCCCT GGGGCAACCG TCCTGCCACC TCCTCCCCAG CCCCGCTGCC 000560
000561 TCCGCCAGGC CACCCCAGAT GCTGCCTTCA CCGGCAACGG CCTCACCTCT CCTGTCACCT TGGCGGGTGG GTAATGGCTG 000640
000641 CTGCAGGCTG GGTTGAGGAG GCTCTGAAGC CAAATCCAGA CTCAGCAGGA AACGAGTGAG GGGAGGGGTG AGTGATGCCG 000720
000721 CCACAGGTCT CTGCTCCTAG AACTTAGCCT GGACTCCTCC AATCTGCCCA GCCGCCTAAC AGGCCCGAGG TTCTGTGTCG 000800
000801 GGGTTCCCTG GGGGCAGGGA GCTTGTGCAG GGAGCCCTCA CCTGTTGATG AGGTGGAAGT ACTTCTGCAG GAAGCCGGCG 000880
000881 TCCACAGCGC TCTTGCAGAG CTCCAGCTGC GTCTGGGGGT AGTAGTGCAC GTAGTTGACA CACATCTCCT CCAGGATCCC 000960
000961 GAAGCCCCCC TGCAAGTTGG AGGAGACCCG TCAGCCCCGG GCCATGCCAC GCAGACGCTG CCATCCAGCA GCTTTCGCCG 001040
001041 CACCCACGTG TACACTGCGT CCACTCGTCT GTTCACTGCA CCGTGCCAGG CATGCTCTGG GGAACCGAGT CCCTGCCCTC 001120
001121 AAGGAATTGC CACCATTGGC AGGAGAGACA GGCAGTGAGT GAGTGAGTCA ACCAGGAAAT TCGTATCAGG TACTGATGAT 001200
001201 GCTGTGAGGA AAAATGAAAC GGGACAAGCG GATGGGGTGT TATTGTGCCC ATTTTATGGG TACAGAAACT GAGTCTCAGA 001280
001281 GCAGGCAAGG GGATGCCCCG TGGTGGCCAC AGCATCGGTG GCACAGCCTG AGTGCACCCA GCGTCCCGGC CATTGTCTGG 001360
001361 AAGCTGTCCC CATGACCTCC AGCGAGAGCC TGGAGCCAAG GACTGCAAGG GAGGCCCTTT CCACTGCAGC CCCGCACCGT 001440
001441 CCACCAGTCA TTTCTCCAAC GTGGCTCTGA GGGGAGCAGG GACTCTATAA GACAGGACCG TGACTAGAGG CCGCGACAAC 001520
001521 CTCCAGCCTC TCACGGCAAC CCTACGGCCT GCCATCGCAT GGGAGGGGCA GGGCAGGCAC CCTCTGAGTC CCCACTGCCA 001600
001601 GCTTTAAGCC CCTCGCTGGG TTGCTGCTCT TGGAGCTGGT GACCGTGGAG CCTCAGCCAT AGGAGGAAGA ACAGCAGCAG 001680
001681 CTTGGAGGAG CTGGGGCTGG AGAGAGCAAA GCTCCCCCGG CAGCAGCTCA GATCCCAGCA GGTCAGGGGC CGGGACATGA 001760
001761 CGCCCTGGCC ACCCTTGCCC CTCCAGGCTC CCCGCTGTTT GTGAAGCTGC TGTGGGCCTG GGGATTTCAT CTGGCTGGTG 001840
001841 GGGAAGAAAG GCAATCTTTA CTCTATGGCA GAACAAAGGG ACTGGGCAAA GCTTGGCGTG GCACTTACAC CAGCTGCCGC 001920
001921 CCCCTCCTCC CGTGCAGACA AAGAGCATGG GGCAGTTCTG CCCAGAGACG AAACCTGGCA CCTGTTGGCC AGGACGCGTT 002000
002001 TTTGCCAGCA TTGTTCTCTG GGCCGGATTC CTCCTTTCCC AGCTTTTCTC ATCCATCCCG CCCCCGTCAG ATCGGGACGA 002080
002081 TTGCCCTCCT GTGTGAGTTC CTGTCCCTCC CCACCCTCTG CCACCACAGA CATCAAAAGG GAACTGAGTC CGACCCTGTG 002160
002161 TAGAATCTGT TCTCCTCTTT CACCTGGGGA AGGAAATCGA ATTTCAAAGG CCACTGTGTC TTGGATCAGC AGGCGAGGGC 002240
002241 TTGTCAGAGT GTGAGAAGCT CAGGTCCACC TGGGGAGCTG CCCTCCCCTT TGATCCCACC TGGTGCTGTG ATGTGGCCAC 002320
002321 TGCCAAGAGG AGGACATGGG CCAGGGAAGC CACAGAACTG CCCACGGGGA CGCTGGCACC GAGGGCCTCA ACCTGCAGAA 002400
002401 CGGCCATCTG AGATGTCCGC GGTGCTCACC AGGCCTGGCA GCCCCGAACG CCCTGGGACG TGGCGTCAGT TCCGCCGCCG 002480
002481 TGAAGCCAGA TTGGGCAGGG AATATGCAGT CTCCTCGCTG GATGCCCGGC AAGACCCTCC CATCCCTGGC CCCGGGGCCG 002560
002561 CGCCTGCAGA ATGGGGCTGA TGGTGGGGAC TTGCCTGGGG TGCTCCACCT GCAGAGCCCT CTGTTTGCGA GCCCACTCAG 002640
002641 TCACTGCACA GGTGCTTAGC CGAGAGGCGG CACAGTCGGG GTTGGCACCT GCACCCATAC CAGCCCTGCC TCCTGTTCGC 002720
002721 TGTGTGGCCT GAGTGGCTGG ACCTCACTGT ATCTCCTGGT GGGATTGCTC AGAGGTCTCA GCAAGGCTTG GTGTGGTTAG 002800
002801 GATGAGTTAT TAGAGCAGTG CTGAGCTGTG GCAAGCACCC GACATCAGCC ACTGCTGTGA TATACTGAGC ACCTCCTCTA 002880
002881 GAGAGAATAA AGGACTGACA AAGCTG

Predicted Small Protein

Name DBH-AS1_smProtein_2570:2731
Length 53
Molecular weight 5349.3953
Aromaticity 0.0
Instability index 48.279245283
Isoelectric point 8.82879638672
Runs 9
Runs residual 0.00954901058444
Runs probability 0.0179983905474
Amino acid sequence MGLMVGTCLGCSTCRALCLRAHSVTAQVLSREAAQSGLAPAPIPALPPVRCVA
Secondary structure LLLEEELLLLHHHHHHHHHHLLLHHHHHHHHHHHHLLLLLLLLLLLLLLLEEL
PRMN -
PiMo -