Difference between revisions of "CYP51A1-AS1"
Chunlei Yu (talk | contribs) (Created page with "==Annotated Information== ===Approved Symbol=== LINC00887 ===Approved Name=== long intergenic non-protein coding RNA 887 ===Previous Symbols=== _ ===Synonyms=== linc-ATP13A4-8...") |
Chunlei Yu (talk | contribs) |
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| Line 4: | Line 4: | ||
===Approved Name=== | ===Approved Name=== | ||
long intergenic non-protein coding RNA 887 | long intergenic non-protein coding RNA 887 | ||
| − | |||
| − | |||
===Synonyms=== | ===Synonyms=== | ||
linc-ATP13A4-8 | linc-ATP13A4-8 | ||
| Line 18: | Line 16: | ||
===pubmed IDs=== | ===pubmed IDs=== | ||
26400545 | 26400545 | ||
| + | ===Disease=== | ||
| + | * renal cell carcinoma <ref name="ref1" /> | ||
| + | ==Labs working on this lncRNA== | ||
| + | * Renal Electrolyte and Hypertension Division, University of Pennsylvania Perelman School of Medicine, Philadelphia, Pennsylvania. <ref name="ref1" /> | ||
| + | ==References== | ||
| + | <references> | ||
| + | <ref name="ref1">Lin J, Zhang X, Xue C, Zhang H, Shashaty MG, Gosai SJ, et al. The long noncoding RNA landscape in hypoxic and inflammatory renal epithelial injury[J]. American journal of physiology Renal physiology. 2015,309(11):F901-13.</ref>(1) | ||
| + | </references> | ||
===Sequence=== | ===Sequence=== | ||
>gi|213512111|ref|NR_024480.1| Homo sapiens long intergenic non-protein coding RNA 887 (LINC00887), long non-coding RNA | >gi|213512111|ref|NR_024480.1| Homo sapiens long intergenic non-protein coding RNA 887 (LINC00887), long non-coding RNA | ||
<dnaseq>ATTCATTTTCTGCTCAGACACCGTTGCTTGCAAAATTCCACCCAGAAGATAAGGGAGGGAGTATCGCTGCAGCGTCCTGCTCTGTGCCTGGTTATATTACTGGATCCTTGTGTTGCAGCCCTAAGATAGAAGGATTGTCTCCATTTCACAGATGAGAGAGAACTGATGCGCAGGAGGCTGAAATTGTCTGAAGTCACACAGCAGCCTCCTCTTAAACATGACAAAGAATCCAAGGACTTGTGCTGGGGCTGTCAGCTGCTATTCTGGTGCCCTGGGGACGAAGAAGGGATCTGGAGGGAAGACTGTCACCCTCTTGCGAATGTTTCCAAGAAGCAGCTCAGCATGGGAGAGAAAAGGGGAGATCCCAGTTCCAGGAACACCTGGCCAGTGTTTCACCTGTTTATCGGAGTTGACAGGACCAGCCAGCCCTTTCCCACCTCTCCCCATCATGATGGATGGGAGCCTGGCCTTTGAGATTCCTGCGAAGGAATGACAAAGAACATCAAGGCTCAATCCTTGGAACTCTCCATCACTCATCTTTAAATTAGACTTCTCTGCTGACTCTCAGAGTTGTGTATGCTGAGAATCCACTGCCTCTAAGACATCCTGCTTGGCAGGTAACAGACATTTCATCCTGAGCTGAGCTCCTGCCCACCCCGCCCACACACAGACCCCTTCTTGCCCACAGATTTCCCATCTCAGCCAATGGCGAGTCCAAAAATCCTTTGTGTCCCCTTTGATTCTTAGGTTCCTATCTCCCTTCGACTGAGGCATCGTTTCCAAATCAGACACTTCTCGTCACCACTATTGCCCTCCCCTTGTCCAACCCACCTTTGGCTCTTGGCTGGAGTCCGGTGAGTCTCCTAGCTGGCTCTCCCTGTTCTCGTCATTTCCCAGTAAGTTCCAACCCTGCCTTCAGACTCTTCTGCACACAGCTTCCAGAGTAATCCTTTCAAAAAGTAAGTCAGATCCCATCTTTTCCCTCCCGTCTCACTCTGTCAGCCACATTCATTCCAAAGGACCATGTGGTCCATGTCCCTGTTCTCTCTGGTTCTCTCACTGCTCTCCTCTGTGCTTACTCTCTCCTGCCTCACAATGTTTGCACTTACTGTTTCTTCTGCTTGGAACTCTTTCCCTCCAAGACCTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGCGCAGTGGTGCAATCTCTGCTCACTGCAAGCTCTGCCTCCCAGGTTCACGTCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACACGCACCAGCCACCATACCCAGCTCATTTTTTTTGTATTTTCAGTAGAGACGGGGTTTCACCATGTTGGCCAGGATGGTCTTGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCTAAGCGCTGGGATTACAGGTGTGAACCACCGCGCCCGGCCTCCCTCCAAGATCTTTACTCACGTTGTCACCTTAGTGACGGCTCCCTCCCTAACCATCCTATTTAAAATTGCAGCCCGTTCAACACCCATTCCTCCTTCTCCATCCTTGCTCTGCTTCCTCCCTTTGACCTGTCACTCTTTAATCCAGTGGCATTCTGATTCAATGGTGACTGGGAGCAGGACCTAAGGAGGTGCGTCATCTGTAGAGAATTTGAAAATAATCGTGAAATAAACTCAAAGTGGGTTTGCTCTTTATGAGCCCCGCACACCAGCAATTCTAAATTCTGTTATCAATATACTTTCCTGCCAGGGTGGGCCGCCCCCACCGATTCTCCTCTATCTTAATACACTATGTGTTTCCCTTGTTTATTTTGCTTATTGTTCATTTCCATGCACTAGAATATAAGCTCCGCGAGGGCAGTATATTTTGTCTGTTTTGTTCACCACTGTGTCCCTCGTGTCTGCCACATGGTGTGTGCTCAGTAAGCTTTAGCTGAATGAATGAAGTGGTGGATGTCGACGTTCCCTTAGTTGGGGGTTATCAGGAGGGCTTCCTGGATGAATTGGTGTCTATATTGCCTGTCCTTAAAGAGGAGGAAGGTGCTCTAGGCAGAAGGAACAGCAGGTACAAAAGCAACTTGACTGTCAGGGTCATTAGCTAAGAGTAGGAGTCAGAGGGATGAGTGGGTGTCGTTCACCAGAATTTACCCTTCAAAATGTCAGTGCTTAGTAAATGAATGTGTTCCTTTATTACTAGTTGTTGGAGGGTCCTTGTTGACATCTTGCAGAGGTCTGGCTGTCACTTTTAATCAGAATGGCTATTCCCCACTCCTGCTGAAGAGCTCCAGGCCTGGCGGGGGTGGGCTGGCGGGCTGTGGTGGTGGTAAGGGCTGTCCCCCAGCACACTGTTAGAACTTTACTTATCCTCTTGCTTGAAGTGTGGGAGCTGGAGACCATTCAGGAAGCTGTGGTTACAGTCCCAGACAGGGTCCCTAAAAGCAAGGAGCCATTCCCAATGCTTCCTCCTTAGGGAAGCCTTCCCTACTTTCTCTTCCCTCTTCTGGGCAGAGTTTGTACCTTCCTCCTTTTTGCTCTCTGTTTATTTCTTTAATTTAACACTTAACAACATAATACCATCTTTATTTGTTCCATGTTTGTATCTTCTACTGAATGTGGCTTCAAGAACAGAAAGCACAGAACGTGGCACGTTGGAGGAAATCAGTAAGTGTTTGCTAAAGGTCCAACAATGAAACAGAACAGATATATCCAGTGCTATGCCGCGTCAAAAGAGTATGAGAGGTATTGTGGTGATGCTTTTGAATGCTAATCAGAATAAGGAGGGTGACTAGTCCATAGTTATATAGAATATAGGATATACAGAATATACCTTTTTCTGTAACGGGATGTGTCACTTAACTTTGTTCCTTAAAGCTCCAGAAGCCCAAGGTCACCCACAATGATTCAAGTATTATCAATGTTGAGAGCCTGTAAAAGCATCAAGTATATTATAGTTTCCAAAAAATTGTGAATTAGACTGAAAACCAGCATTTAAAAAATAAAGTGATGTTGACTTAAAAAAAAAA</dnaseq> | <dnaseq>ATTCATTTTCTGCTCAGACACCGTTGCTTGCAAAATTCCACCCAGAAGATAAGGGAGGGAGTATCGCTGCAGCGTCCTGCTCTGTGCCTGGTTATATTACTGGATCCTTGTGTTGCAGCCCTAAGATAGAAGGATTGTCTCCATTTCACAGATGAGAGAGAACTGATGCGCAGGAGGCTGAAATTGTCTGAAGTCACACAGCAGCCTCCTCTTAAACATGACAAAGAATCCAAGGACTTGTGCTGGGGCTGTCAGCTGCTATTCTGGTGCCCTGGGGACGAAGAAGGGATCTGGAGGGAAGACTGTCACCCTCTTGCGAATGTTTCCAAGAAGCAGCTCAGCATGGGAGAGAAAAGGGGAGATCCCAGTTCCAGGAACACCTGGCCAGTGTTTCACCTGTTTATCGGAGTTGACAGGACCAGCCAGCCCTTTCCCACCTCTCCCCATCATGATGGATGGGAGCCTGGCCTTTGAGATTCCTGCGAAGGAATGACAAAGAACATCAAGGCTCAATCCTTGGAACTCTCCATCACTCATCTTTAAATTAGACTTCTCTGCTGACTCTCAGAGTTGTGTATGCTGAGAATCCACTGCCTCTAAGACATCCTGCTTGGCAGGTAACAGACATTTCATCCTGAGCTGAGCTCCTGCCCACCCCGCCCACACACAGACCCCTTCTTGCCCACAGATTTCCCATCTCAGCCAATGGCGAGTCCAAAAATCCTTTGTGTCCCCTTTGATTCTTAGGTTCCTATCTCCCTTCGACTGAGGCATCGTTTCCAAATCAGACACTTCTCGTCACCACTATTGCCCTCCCCTTGTCCAACCCACCTTTGGCTCTTGGCTGGAGTCCGGTGAGTCTCCTAGCTGGCTCTCCCTGTTCTCGTCATTTCCCAGTAAGTTCCAACCCTGCCTTCAGACTCTTCTGCACACAGCTTCCAGAGTAATCCTTTCAAAAAGTAAGTCAGATCCCATCTTTTCCCTCCCGTCTCACTCTGTCAGCCACATTCATTCCAAAGGACCATGTGGTCCATGTCCCTGTTCTCTCTGGTTCTCTCACTGCTCTCCTCTGTGCTTACTCTCTCCTGCCTCACAATGTTTGCACTTACTGTTTCTTCTGCTTGGAACTCTTTCCCTCCAAGACCTTTTTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGCGCAGTGGTGCAATCTCTGCTCACTGCAAGCTCTGCCTCCCAGGTTCACGTCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACACGCACCAGCCACCATACCCAGCTCATTTTTTTTGTATTTTCAGTAGAGACGGGGTTTCACCATGTTGGCCAGGATGGTCTTGATCTCCTGACCTCGTGATCCGCCCGCCTCGGCCTCCCTAAGCGCTGGGATTACAGGTGTGAACCACCGCGCCCGGCCTCCCTCCAAGATCTTTACTCACGTTGTCACCTTAGTGACGGCTCCCTCCCTAACCATCCTATTTAAAATTGCAGCCCGTTCAACACCCATTCCTCCTTCTCCATCCTTGCTCTGCTTCCTCCCTTTGACCTGTCACTCTTTAATCCAGTGGCATTCTGATTCAATGGTGACTGGGAGCAGGACCTAAGGAGGTGCGTCATCTGTAGAGAATTTGAAAATAATCGTGAAATAAACTCAAAGTGGGTTTGCTCTTTATGAGCCCCGCACACCAGCAATTCTAAATTCTGTTATCAATATACTTTCCTGCCAGGGTGGGCCGCCCCCACCGATTCTCCTCTATCTTAATACACTATGTGTTTCCCTTGTTTATTTTGCTTATTGTTCATTTCCATGCACTAGAATATAAGCTCCGCGAGGGCAGTATATTTTGTCTGTTTTGTTCACCACTGTGTCCCTCGTGTCTGCCACATGGTGTGTGCTCAGTAAGCTTTAGCTGAATGAATGAAGTGGTGGATGTCGACGTTCCCTTAGTTGGGGGTTATCAGGAGGGCTTCCTGGATGAATTGGTGTCTATATTGCCTGTCCTTAAAGAGGAGGAAGGTGCTCTAGGCAGAAGGAACAGCAGGTACAAAAGCAACTTGACTGTCAGGGTCATTAGCTAAGAGTAGGAGTCAGAGGGATGAGTGGGTGTCGTTCACCAGAATTTACCCTTCAAAATGTCAGTGCTTAGTAAATGAATGTGTTCCTTTATTACTAGTTGTTGGAGGGTCCTTGTTGACATCTTGCAGAGGTCTGGCTGTCACTTTTAATCAGAATGGCTATTCCCCACTCCTGCTGAAGAGCTCCAGGCCTGGCGGGGGTGGGCTGGCGGGCTGTGGTGGTGGTAAGGGCTGTCCCCCAGCACACTGTTAGAACTTTACTTATCCTCTTGCTTGAAGTGTGGGAGCTGGAGACCATTCAGGAAGCTGTGGTTACAGTCCCAGACAGGGTCCCTAAAAGCAAGGAGCCATTCCCAATGCTTCCTCCTTAGGGAAGCCTTCCCTACTTTCTCTTCCCTCTTCTGGGCAGAGTTTGTACCTTCCTCCTTTTTGCTCTCTGTTTATTTCTTTAATTTAACACTTAACAACATAATACCATCTTTATTTGTTCCATGTTTGTATCTTCTACTGAATGTGGCTTCAAGAACAGAAAGCACAGAACGTGGCACGTTGGAGGAAATCAGTAAGTGTTTGCTAAAGGTCCAACAATGAAACAGAACAGATATATCCAGTGCTATGCCGCGTCAAAAGAGTATGAGAGGTATTGTGGTGATGCTTTTGAATGCTAATCAGAATAAGGAGGGTGACTAGTCCATAGTTATATAGAATATAGGATATACAGAATATACCTTTTTCTGTAACGGGATGTGTCACTTAACTTTGTTCCTTAAAGCTCCAGAAGCCCAAGGTCACCCACAATGATTCAAGTATTATCAATGTTGAGAGCCTGTAAAAGCATCAAGTATATTATAGTTTCCAAAAAATTGTGAATTAGACTGAAAACCAGCATTTAAAAAATAAAGTGATGTTGACTTAAAAAAAAAA</dnaseq> | ||
Latest revision as of 03:55, 1 July 2016
Contents
Annotated Information
Approved Symbol
LINC00887
Approved Name
long intergenic non-protein coding RNA 887
Synonyms
linc-ATP13A4-8
Chromosome
3q29
RefSeq ID
NR_024480
OMIM ID
_
Ensembl ID
ENSG00000214145
pubmed IDs
26400545
Disease
- renal cell carcinoma [1]
Labs working on this lncRNA
- Renal Electrolyte and Hypertension Division, University of Pennsylvania Perelman School of Medicine, Philadelphia, Pennsylvania. [1]
References
Sequence
>gi|213512111|ref|NR_024480.1| Homo sapiens long intergenic non-protein coding RNA 887 (LINC00887), long non-coding RNA
000001 ATTCATTTTC TGCTCAGACA CCGTTGCTTG CAAAATTCCA CCCAGAAGAT AAGGGAGGGA GTATCGCTGC AGCGTCCTGC 000080
000081 TCTGTGCCTG GTTATATTAC TGGATCCTTG TGTTGCAGCC CTAAGATAGA AGGATTGTCT CCATTTCACA GATGAGAGAG 000160
000161 AACTGATGCG CAGGAGGCTG AAATTGTCTG AAGTCACACA GCAGCCTCCT CTTAAACATG ACAAAGAATC CAAGGACTTG 000240
000241 TGCTGGGGCT GTCAGCTGCT ATTCTGGTGC CCTGGGGACG AAGAAGGGAT CTGGAGGGAA GACTGTCACC CTCTTGCGAA 000320
000321 TGTTTCCAAG AAGCAGCTCA GCATGGGAGA GAAAAGGGGA GATCCCAGTT CCAGGAACAC CTGGCCAGTG TTTCACCTGT 000400
000401 TTATCGGAGT TGACAGGACC AGCCAGCCCT TTCCCACCTC TCCCCATCAT GATGGATGGG AGCCTGGCCT TTGAGATTCC 000480
000481 TGCGAAGGAA TGACAAAGAA CATCAAGGCT CAATCCTTGG AACTCTCCAT CACTCATCTT TAAATTAGAC TTCTCTGCTG 000560
000561 ACTCTCAGAG TTGTGTATGC TGAGAATCCA CTGCCTCTAA GACATCCTGC TTGGCAGGTA ACAGACATTT CATCCTGAGC 000640
000641 TGAGCTCCTG CCCACCCCGC CCACACACAG ACCCCTTCTT GCCCACAGAT TTCCCATCTC AGCCAATGGC GAGTCCAAAA 000720
000721 ATCCTTTGTG TCCCCTTTGA TTCTTAGGTT CCTATCTCCC TTCGACTGAG GCATCGTTTC CAAATCAGAC ACTTCTCGTC 000800
000801 ACCACTATTG CCCTCCCCTT GTCCAACCCA CCTTTGGCTC TTGGCTGGAG TCCGGTGAGT CTCCTAGCTG GCTCTCCCTG 000880
000881 TTCTCGTCAT TTCCCAGTAA GTTCCAACCC TGCCTTCAGA CTCTTCTGCA CACAGCTTCC AGAGTAATCC TTTCAAAAAG 000960
000961 TAAGTCAGAT CCCATCTTTT CCCTCCCGTC TCACTCTGTC AGCCACATTC ATTCCAAAGG ACCATGTGGT CCATGTCCCT 001040
001041 GTTCTCTCTG GTTCTCTCAC TGCTCTCCTC TGTGCTTACT CTCTCCTGCC TCACAATGTT TGCACTTACT GTTTCTTCTG 001120
001121 CTTGGAACTC TTTCCCTCCA AGACCTTTTT TTTTTGAGAC GGAGTCTCGC TCTGTCGCCC AGGCTGGAGC GCAGTGGTGC 001200
001201 AATCTCTGCT CACTGCAAGC TCTGCCTCCC AGGTTCACGT CATTCTCCTG CCTCAGCCTC CCGAGTAGCT GGGACTACAC 001280
001281 GCACCAGCCA CCATACCCAG CTCATTTTTT TTGTATTTTC AGTAGAGACG GGGTTTCACC ATGTTGGCCA GGATGGTCTT 001360
001361 GATCTCCTGA CCTCGTGATC CGCCCGCCTC GGCCTCCCTA AGCGCTGGGA TTACAGGTGT GAACCACCGC GCCCGGCCTC 001440
001441 CCTCCAAGAT CTTTACTCAC GTTGTCACCT TAGTGACGGC TCCCTCCCTA ACCATCCTAT TTAAAATTGC AGCCCGTTCA 001520
001521 ACACCCATTC CTCCTTCTCC ATCCTTGCTC TGCTTCCTCC CTTTGACCTG TCACTCTTTA ATCCAGTGGC ATTCTGATTC 001600
001601 AATGGTGACT GGGAGCAGGA CCTAAGGAGG TGCGTCATCT GTAGAGAATT TGAAAATAAT CGTGAAATAA ACTCAAAGTG 001680
001681 GGTTTGCTCT TTATGAGCCC CGCACACCAG CAATTCTAAA TTCTGTTATC AATATACTTT CCTGCCAGGG TGGGCCGCCC 001760
001761 CCACCGATTC TCCTCTATCT TAATACACTA TGTGTTTCCC TTGTTTATTT TGCTTATTGT TCATTTCCAT GCACTAGAAT 001840
001841 ATAAGCTCCG CGAGGGCAGT ATATTTTGTC TGTTTTGTTC ACCACTGTGT CCCTCGTGTC TGCCACATGG TGTGTGCTCA 001920
001921 GTAAGCTTTA GCTGAATGAA TGAAGTGGTG GATGTCGACG TTCCCTTAGT TGGGGGTTAT CAGGAGGGCT TCCTGGATGA 002000
002001 ATTGGTGTCT ATATTGCCTG TCCTTAAAGA GGAGGAAGGT GCTCTAGGCA GAAGGAACAG CAGGTACAAA AGCAACTTGA 002080
002081 CTGTCAGGGT CATTAGCTAA GAGTAGGAGT CAGAGGGATG AGTGGGTGTC GTTCACCAGA ATTTACCCTT CAAAATGTCA 002160
002161 GTGCTTAGTA AATGAATGTG TTCCTTTATT ACTAGTTGTT GGAGGGTCCT TGTTGACATC TTGCAGAGGT CTGGCTGTCA 002240
002241 CTTTTAATCA GAATGGCTAT TCCCCACTCC TGCTGAAGAG CTCCAGGCCT GGCGGGGGTG GGCTGGCGGG CTGTGGTGGT 002320
002321 GGTAAGGGCT GTCCCCCAGC ACACTGTTAG AACTTTACTT ATCCTCTTGC TTGAAGTGTG GGAGCTGGAG ACCATTCAGG 002400
002401 AAGCTGTGGT TACAGTCCCA GACAGGGTCC CTAAAAGCAA GGAGCCATTC CCAATGCTTC CTCCTTAGGG AAGCCTTCCC 002480
002481 TACTTTCTCT TCCCTCTTCT GGGCAGAGTT TGTACCTTCC TCCTTTTTGC TCTCTGTTTA TTTCTTTAAT TTAACACTTA 002560
002561 ACAACATAAT ACCATCTTTA TTTGTTCCAT GTTTGTATCT TCTACTGAAT GTGGCTTCAA GAACAGAAAG CACAGAACGT 002640
002641 GGCACGTTGG AGGAAATCAG TAAGTGTTTG CTAAAGGTCC AACAATGAAA CAGAACAGAT ATATCCAGTG CTATGCCGCG 002720
002721 TCAAAAGAGT ATGAGAGGTA TTGTGGTGAT GCTTTTGAAT GCTAATCAGA ATAAGGAGGG TGACTAGTCC ATAGTTATAT 002800
002801 AGAATATAGG ATATACAGAA TATACCTTTT TCTGTAACGG GATGTGTCAC TTAACTTTGT TCCTTAAAGC TCCAGAAGCC 002880
002881 CAAGGTCACC CACAATGATT CAAGTATTAT CAATGTTGAG AGCCTGTAAA AGCATCAAGT ATATTATAGT TTCCAAAAAA 002960
002961 TTGTGAATTA GACTGAAAAC CAGCATTTAA AAAATAAAGT GATGTTGACT TAAAAAAAAA A
000081 TCTGTGCCTG GTTATATTAC TGGATCCTTG TGTTGCAGCC CTAAGATAGA AGGATTGTCT CCATTTCACA GATGAGAGAG 000160
000161 AACTGATGCG CAGGAGGCTG AAATTGTCTG AAGTCACACA GCAGCCTCCT CTTAAACATG ACAAAGAATC CAAGGACTTG 000240
000241 TGCTGGGGCT GTCAGCTGCT ATTCTGGTGC CCTGGGGACG AAGAAGGGAT CTGGAGGGAA GACTGTCACC CTCTTGCGAA 000320
000321 TGTTTCCAAG AAGCAGCTCA GCATGGGAGA GAAAAGGGGA GATCCCAGTT CCAGGAACAC CTGGCCAGTG TTTCACCTGT 000400
000401 TTATCGGAGT TGACAGGACC AGCCAGCCCT TTCCCACCTC TCCCCATCAT GATGGATGGG AGCCTGGCCT TTGAGATTCC 000480
000481 TGCGAAGGAA TGACAAAGAA CATCAAGGCT CAATCCTTGG AACTCTCCAT CACTCATCTT TAAATTAGAC TTCTCTGCTG 000560
000561 ACTCTCAGAG TTGTGTATGC TGAGAATCCA CTGCCTCTAA GACATCCTGC TTGGCAGGTA ACAGACATTT CATCCTGAGC 000640
000641 TGAGCTCCTG CCCACCCCGC CCACACACAG ACCCCTTCTT GCCCACAGAT TTCCCATCTC AGCCAATGGC GAGTCCAAAA 000720
000721 ATCCTTTGTG TCCCCTTTGA TTCTTAGGTT CCTATCTCCC TTCGACTGAG GCATCGTTTC CAAATCAGAC ACTTCTCGTC 000800
000801 ACCACTATTG CCCTCCCCTT GTCCAACCCA CCTTTGGCTC TTGGCTGGAG TCCGGTGAGT CTCCTAGCTG GCTCTCCCTG 000880
000881 TTCTCGTCAT TTCCCAGTAA GTTCCAACCC TGCCTTCAGA CTCTTCTGCA CACAGCTTCC AGAGTAATCC TTTCAAAAAG 000960
000961 TAAGTCAGAT CCCATCTTTT CCCTCCCGTC TCACTCTGTC AGCCACATTC ATTCCAAAGG ACCATGTGGT CCATGTCCCT 001040
001041 GTTCTCTCTG GTTCTCTCAC TGCTCTCCTC TGTGCTTACT CTCTCCTGCC TCACAATGTT TGCACTTACT GTTTCTTCTG 001120
001121 CTTGGAACTC TTTCCCTCCA AGACCTTTTT TTTTTGAGAC GGAGTCTCGC TCTGTCGCCC AGGCTGGAGC GCAGTGGTGC 001200
001201 AATCTCTGCT CACTGCAAGC TCTGCCTCCC AGGTTCACGT CATTCTCCTG CCTCAGCCTC CCGAGTAGCT GGGACTACAC 001280
001281 GCACCAGCCA CCATACCCAG CTCATTTTTT TTGTATTTTC AGTAGAGACG GGGTTTCACC ATGTTGGCCA GGATGGTCTT 001360
001361 GATCTCCTGA CCTCGTGATC CGCCCGCCTC GGCCTCCCTA AGCGCTGGGA TTACAGGTGT GAACCACCGC GCCCGGCCTC 001440
001441 CCTCCAAGAT CTTTACTCAC GTTGTCACCT TAGTGACGGC TCCCTCCCTA ACCATCCTAT TTAAAATTGC AGCCCGTTCA 001520
001521 ACACCCATTC CTCCTTCTCC ATCCTTGCTC TGCTTCCTCC CTTTGACCTG TCACTCTTTA ATCCAGTGGC ATTCTGATTC 001600
001601 AATGGTGACT GGGAGCAGGA CCTAAGGAGG TGCGTCATCT GTAGAGAATT TGAAAATAAT CGTGAAATAA ACTCAAAGTG 001680
001681 GGTTTGCTCT TTATGAGCCC CGCACACCAG CAATTCTAAA TTCTGTTATC AATATACTTT CCTGCCAGGG TGGGCCGCCC 001760
001761 CCACCGATTC TCCTCTATCT TAATACACTA TGTGTTTCCC TTGTTTATTT TGCTTATTGT TCATTTCCAT GCACTAGAAT 001840
001841 ATAAGCTCCG CGAGGGCAGT ATATTTTGTC TGTTTTGTTC ACCACTGTGT CCCTCGTGTC TGCCACATGG TGTGTGCTCA 001920
001921 GTAAGCTTTA GCTGAATGAA TGAAGTGGTG GATGTCGACG TTCCCTTAGT TGGGGGTTAT CAGGAGGGCT TCCTGGATGA 002000
002001 ATTGGTGTCT ATATTGCCTG TCCTTAAAGA GGAGGAAGGT GCTCTAGGCA GAAGGAACAG CAGGTACAAA AGCAACTTGA 002080
002081 CTGTCAGGGT CATTAGCTAA GAGTAGGAGT CAGAGGGATG AGTGGGTGTC GTTCACCAGA ATTTACCCTT CAAAATGTCA 002160
002161 GTGCTTAGTA AATGAATGTG TTCCTTTATT ACTAGTTGTT GGAGGGTCCT TGTTGACATC TTGCAGAGGT CTGGCTGTCA 002240
002241 CTTTTAATCA GAATGGCTAT TCCCCACTCC TGCTGAAGAG CTCCAGGCCT GGCGGGGGTG GGCTGGCGGG CTGTGGTGGT 002320
002321 GGTAAGGGCT GTCCCCCAGC ACACTGTTAG AACTTTACTT ATCCTCTTGC TTGAAGTGTG GGAGCTGGAG ACCATTCAGG 002400
002401 AAGCTGTGGT TACAGTCCCA GACAGGGTCC CTAAAAGCAA GGAGCCATTC CCAATGCTTC CTCCTTAGGG AAGCCTTCCC 002480
002481 TACTTTCTCT TCCCTCTTCT GGGCAGAGTT TGTACCTTCC TCCTTTTTGC TCTCTGTTTA TTTCTTTAAT TTAACACTTA 002560
002561 ACAACATAAT ACCATCTTTA TTTGTTCCAT GTTTGTATCT TCTACTGAAT GTGGCTTCAA GAACAGAAAG CACAGAACGT 002640
002641 GGCACGTTGG AGGAAATCAG TAAGTGTTTG CTAAAGGTCC AACAATGAAA CAGAACAGAT ATATCCAGTG CTATGCCGCG 002720
002721 TCAAAAGAGT ATGAGAGGTA TTGTGGTGAT GCTTTTGAAT GCTAATCAGA ATAAGGAGGG TGACTAGTCC ATAGTTATAT 002800
002801 AGAATATAGG ATATACAGAA TATACCTTTT TCTGTAACGG GATGTGTCAC TTAACTTTGT TCCTTAAAGC TCCAGAAGCC 002880
002881 CAAGGTCACC CACAATGATT CAAGTATTAT CAATGTTGAG AGCCTGTAAA AGCATCAAGT ATATTATAGT TTCCAAAAAA 002960
002961 TTGTGAATTA GACTGAAAAC CAGCATTTAA AAAATAAAGT GATGTTGACT TAAAAAAAAA A
Predicted Small Protein
| Name | CYP51A1-AS1_smProtein_1202:1384 |
| Length | 60 |
| Molecular weight | 6728.8173 |
| Aromaticity | 0.0333333333333 |
| Instability index | 54.7616666667 |
| Isoelectric point | 12.2568969727 |
| Runs | 11 |
| Runs residual | 0.0335992907801 |
| Runs probability | 0.0404522169228 |
| Amino acid sequence | MRSGKMRENLGVAYRAAEVRHTLRFTCGLPRRLRLLRRTGRGRARLSPAIARTSAGAAQH |
| Secondary structure | LLLLHHHHLLLHHHHHHHHHHHHHHLLLLHHHHHHHHHLLLLEEELLHHHHHLLLLLLLL |
| PRMN | - |
| PiMo | - |
