ASMTL-AS1

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Revision as of 05:43, 23 June 2016 by Lin Liu (talk | contribs) (Created page with "==Annotated Information== ===Approved Symbol=== ASMTL-AS1 ===Approved Name=== ASMTL antisense RNA 1 ===Previous Symbols=== CXYorf2, NCRNA00105, ASMTLAS, ASMTL-AS ===Synonyms==...")
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Annotated Information

Approved Symbol

ASMTL-AS1

Approved Name

ASMTL antisense RNA 1

Previous Symbols

CXYorf2, NCRNA00105, ASMTLAS, ASMTL-AS

Synonyms

FLJ13330

Chromosome

Xp22.33 and Yp11.32

RefSeq ID

XR_040863

OMIM ID

_

Ensembl ID

ENSG00000236017

pubmed IDs

14702039

Sequence

>gi|169216901|ref|XR_040863.1| PREDICTED: Homo sapiens misc_RNA (CXYorf2), miscRNA

000001 TTGTACTCCA GTCTGGGTAA GAAGAGCTAA ACTCCAGAGT CTGTCTCAGA AAAAGGAAAA CAGCTGAAAT ATAGGAGACT 000080
000081 GACGCCCAGC CCAGGAACAG GTAAGCTGGG TGCACGCGCC GTGAAAACAG CACCTAGGCC TGCTCCGGTT CTCGCTTTGC 000160
000161 AGATGCCTCC TGAACCTCAG TGCCTCCTAA GGTCAAGGCT GTGAGTTAAA GGGCTCCACC CCAGCCCAGC CCCAGGTTGG 000240
000241 CCCAGCCATT CCCTGGTGGA GGGGCCAGGG AGGAAAGGGG GCTGTGTGGG CACCAGAGGG TGAACTGAGG TCTGAGGGTC 000320
000321 GGGACACAGG CCGGGAACAG CAGCTGGGAG CGGAGCACGG GGGAAACGTG GATGCGCTGA GCTCCCTACA ACCGCAGTGA 000400
000401 GCATGTGCCC AGGAGGGCCT CACGGGGTGG GTGTGAGTCT GGCCTGCCTG GGCTCGGGGT GGGGGGTGTT TACAGACGCA 000480
000481 TTTCAGCCCC GCAGCAGGGG CTGGGGAGGT CCCGCTCGTG ACAGTCTCTG CACCAAGGCA GGAGAGATGG AAGCCGCCCA 000560
000561 GAGAACTGCC ACTCCATAGC CTGTGGGCAT CCAGGGGTGA GCGGCAGCGA TGGCGCCCCA TGGAGGAAAC ACACTGGAAA 000640
000641 TCGTGCAGAA GATGGGAAGA TGCAGGCTGG AGTGCGGAGA AGGACTGAGA CCCTGCCTGG TAGACGGCAC CGTCACAGCA 000720
000721 GCCGTCTGCC TGCTAGGAGG AGCGTCTCCA CCAGCAGCAG GCCGGCCCCT GAGGGAGACA GCAGAGAGCT GGAGTCCTGG 000800
000801 CCAGCCAGGC GGGGATCCTT CAGCAGGACA CAGGGGACAC AGCAGGCAAC AGGAGCTCAG AACGCTCTCG GCGACCCTGC 000880
000881 TGAGTAACTT GTGGACTTTG TCGTCTGGCC AGTCATGCAG GATCCGGCAC AGGACGTACA GCTCAGCGCT GGGGAGGGGG 000960
000961 TCCCTGAAAA AGTCACCTGG TTTAAAGACA AAACGAGATA CGTCCGTCAG GTATGGAAGA AGCAGTCCTC CCCGGACAGA 001040
001041 TCCTGGGACG GCCACCCGCA TCCTAAATCA GGGACAGAGA AGAGAGGGGT GTGGGCGGGA ATGGGTCTTC CTGAAGTACA 001120
001121 TCCCCGTGGG GACTTGAACA GAGCTCCATG AGGAGCTGGT TAGTGATGTC ACGCCCGTGC GGTTTGACTC GGGCTGAGAA 001200
001201 AACGCTGGGG ACAGTGGCTC ACACCTGTAA TCTCAGCATT TTGGGAGCCT GAGGTGGGCA GATTGTCTGA GCTCAGGAGT 001280
001281 TCGAGACCAG CCTGGGCAAC ACGGCGAAAC CCCATCTCTA CTAAAAATGC AAATTAGCTG GACAGGGGTG GCGGGCGCCT 001360
001361 GTCATCCCAG CTACGCGGGA GGCTGAGGCA GGAGAATCGC TTGAACCTGG GAGGTGGAGG TTGCAGTGAG CCGAGATCGC 001440
001441 GCCATCGCAC TCCAGCCTGG GCGACAAGAA GGCAAGGGAG GAAAAAAGCA GGGAATTCAG GGGCAGCACC TGGGCGAGGC 001520
001521 AGGCAGAGTC GGCGCACATG GGCGTGTGCC AGGGAGAGTC GGGGCCGCAC TGCCGGTGAG TGGGCAATGG CAGGGCCTTC 001600
001601 TCTGGTGATC CCCTGATTCA GGCGCCCCAG GAGGGTTGCC TGTTGCGGGG GGCGCATGTA GCTGCACGCC CCTCTGTAAT 001680
001681 TGCTGAAATA AAAAGATGGT CTGCTGTAGT GCAGTGAATG GTGTCCCCTT AAAAGATATA TTCAGGTGCT GACCCTCAGT 001760
001761 CGCTGGGAAT GGGACCTTAT CTGGAAATAG GGTCTCTATG GATGTCATTG AGT

Predicted Small Protein

Name ASMTL-AS1_smProtein_914:1150
Length 78
Molecular weight 8832.7927
Aromaticity 0.0769230769231
Instability index 40.4756410256
Isoelectric point 9.51824951172
Runs 12
Runs residual 0.0201688555347
Runs probability 0.0138888888889
Amino acid sequence MQDPAQDVQLSAGEGVPEKVTWFKDKTRYVRQVWKKQSSPDRSWDGHPHPKSGTEKRGVW
AGMGLPEVHPRGDLNRAP
Secondary structure LLLLHHHEEELLLLLLLLEEEEEELLLEEEHHHEEELLLLLLLLLLLLLLLLLLLLLEEE
ELLLLLLLLLLLLLLLLL
PRMN -
PiMo -