STAM-AS1

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Annotated Information

Approved Symbol

STAM-AS1

Approved Name

STAM antisense RNA 1 (head to head)

Previous Symbols

_

Synonyms

locus3182

Chromosome

10p12.33

RefSeq ID

NR_110370

OMIM ID

_

Ensembl ID

ENSG00000260589

pubmed IDs

23382218

Sequence

>gi|576796909|ref|NR_110370.1| Homo sapiens STAM antisense RNA 1 (head to head) (STAM-AS1), long non-coding RNA

000001 ACTAACAACC CCAGGAGTGA CTGGGAGAGC CAGGAGAAAG AAAGCAGGTT GAGTTCGGGT CGAGCTGTGC GCCTTTTTTC 000080
000081 CTCTCGCTCT CTCGGTTATC ATAACCTTGT ATTCCCTCTG GAAGGAAATG GAAATTCCTT TGGATCATCT TCTAGGTAAA 000160
000161 CAGTTTAATT AGCTGCGTGA GGTGACAAAC TTGCTCGGAT GAAGTCATGG GAGCTGAACG AATTGGCCTG AATCCCAAGA 000240
000241 GGGGAGTGTT CAGGGCGCGC GTGTCCCTCG GAGAGGCTGA GGTAACGCTG GCTCCTTCCC GGGAGTCCCT GAACGCCCGG 000320
000321 CTTTGGAATC TGCAGACAGC TCTTCTAGCA GGGCGTTGGC ACCTACTGAC TAACCGTGCA ATCACTCAGC AGCTGTGATG 000400
000401 GTTGGTGACA TGTCTTTCAC AGCCCAAGAT AGCCTCCCTA GACTGAGCAA AAAAAAGAAA ACAGAAAAAA ACTGGAGCTA 000480
000481 AAAGTTGATC AGTGAGTGAT TCCTAGCAAC CCAAAATGTT GGTTTATTTA TTTTACTTAT AAGTTTAGTT AACCAATAAA 000560
000561 AATTATTCTC TGTGTGATGG AGAAGTTTTA AGGAGCATCT ACTAGAGATG TTGCGTCCCA CTTGGAACAA ACTTAGTAAG 000640
000641 CACATCTTGT ACGTAAATGG AAATTATCCC GCAAATTACG GCATCTCCAA ATGTAGCGTG GAAACTAATA TTGACATGTC 000720
000721 AACACAGGAT TAATACATAG TAATCAAAGA GTGCTTAAAA ATTCATTAAA AATGAAGTCC CACCTCTAAA AGTGAAATGT 000800
000801 GCAAATTAAA GTAGCAGTTA GATAATGTTT TGTCATTTAG GTAAAAATTA CAAAGAATCG GCCGGGCGCG GTGGCTCACG 000880
000881 CCTGTAATCC CAGCACTCTG GGAGGCCGAG GCCGGCAGAT CACCTGAGGT CAGGAGTTCA AGACCAGCCT GGCCATGGTG 000960
000961 AAACCCCGTC TCTACTAAAA GTACAAAAAA TTAGCCGGGC GTGGTGGTGC GCGCTTGTAA TCCCAGCTAT TCGGGAGGCT 001040
001041 GAGGCTGGGA ATCGTTTGAA CCCGGGAGCG AAACTCCGTC TCAAAAAAAG AAAAAAATTG CAAAGAATCA GGGATGTGAG 001120
001121 GAGTCAGACA CTCACATACT GTTGGATGAA GTGTAAATAC TGTATAATCT TCCTAAGGGA AATATTTGGA AGCATGTAAA 001200
001201 AAAATTTTTA AAACCTTAGG ACCCAGCAAT TCCATTTCGG CAAATTAATC CTAAAGACAT TCTTTTAAAA CATGAACAAA 001280
001281 GGTATACATG GCAACATTGT CTAAAGGATC AAAGCATTGC CAGCCATTAA ATGTCCCACA TTGAGTGATT GGACAAATTG 001360
001361 CTTCACCTCT TGGTGTCTCA GTTTCCTCAT GTGTAAGAAA CAGGAATAAT AGGGTTGTGA GGATCAAATG AATTAGTACA 001440
001441 AGCAAAACGC TTATTACAGT GCCTGGCATA GAGTAAGCAC TAAATAAGTG TAACTGATCA CTGTAATTTA CACTGGTCAG 001520
001521 TTAAATCATA GTACATAAGA TGTGAAAACT ACACAGCCAT TTAAGGTGCA TAATACAGAT TCATATTTAC ATAGACATCT 001600
001601 GAATACACAA GTTTTCAGAA GGAAGTTACA AACCTTATAA AATTACAAAT GCCCACAATT TTAAAAATCT GAAAGGAAAT 001680
001681 ACATGAGAAT ATTATGACAT GATTGTCTCT GAGTGGCAAG ATTCTAGACA ATGTTTTTGT TCTTTGTGCA TTTTATTATT 001760
001761 CAAAATATTT TAATGATGAG CGTGTATTCC TTTCAAAAGC AGAAAAAATG TTAAAATACA ACAATGTCAA AAATGGTATG 001840
001841 TTGGTACCAC CAGTTTCTTA ATGTTTTGAA GGGCCAATAC CAAAAGCGTG CTTGTGTTTC ATTATGACAA GTATAGAATT 001920
001921 ATTCGGAAAT ATCACGACTG ATACGGAAGT CAGAACATTC CCTCTCAAAA ATGTGCTTTG ATTGCTGGGC TGACAGAATT 002000
002001 AGGTGACAAC TTGTTTACCT TAAGATCCTG AGCAGTGTCT TGGGCCATTA TCATAAGTGC CTGAGCCAGA TATTGGTGGC 002080
002081 TCAGACTGGG TGTATCAGAG CCAGATATTG ATGAAAATGC ATTTGTACAT GTTCTGTACT CCGGACTGAA TTACTCTGTT 002160
002161 GCCAGCAATA AGCCAGGGCA CAAACTGTTC AAGCCTTGAT TATCAATATG TGTGCACTGG GAGTAATACA TACTAGTATT 002240
002241 GAGAGCAGTA TCCGTGCATT CTGACCTAGA ATGACTTTAG CTGTGGGGGC AGGGGGGTCT CGATGATTAA TGTGCTGTAT 002320
002321 AAATAATAAA CATTTTTTAA ATATAAAATT TTTAATATTT AACTTAAAAG ACAAACATAA AAAGTGAAAT GCTTTGTATT 002400
002401 TTGTGGTTAA CGTCCCTTAT TATCCCTTTA AAATACTGAA ATTCTATGAG TTTCACTTTT AGTATTACCA CAGTTTTTAA 002480
002481 AACGTTTTGA AGACTACATA TCAATGGCAT ATTAAAATGT TTCTGTAATG TTGTATGTTT AATAAATTCT GTGGTTGTTT 002560
002561 GTTAAATGTT ATATCCCTTT ATTCTCAGTT TGATTTTGAA AATTCATCTA CATTAAAAAC AAAAATACTG GCCAA

Predicted Small Protein

Name STAM-AS1_smProtein_206:397
Length 63
Molecular weight 7023.0555
Aromaticity 0.047619047619
Instability index 44.7650793651
Isoelectric point 11.7819213867
Runs 11
Runs residual 0.0296404275996
Runs probability 0.0478071654542
Amino acid sequence MGAERIGLNPKRGVFRARVSLGEAEVTLAPSRESLNARLWNLQTALLAGRWHLLTNRAIT
QQL
Secondary structure LLLEEELLLLLLLEEEEEEELLLEEEEELLLHHHHHHHHHHHHHHHHHLHHHHHHHHHHH
HLL
PRMN -
PiMo -