SMAD5-AS1
Contents
Annotated Information
Approved Symbol
SMAD5-AS1 (SMAD5 antisense RNA 1)
Previous Symbols
SMAD5OS
Northern blot analysis of SMAD5-AS1 and SMAD5 expression in human fetal tissues. [1].
Synonyms
DAMS
Chromosome
5q31.1
RefSeq ID
NR_026763
Ensembl ID
ENSG00000164621
Characteristics
SMAD5-AS1, whose 3' exonic sequences contain in part an alternate 5' exon of SMAD5, in the antisense orientation.[1]
Function
SMAD5-AS1 is a potential regulator of SMAD5 mRNA and protein levels.[1]
Expression
In contrast to SMAD5, SMAD5-AS1 expression is not readily detectable in adult and fetal tissues.[1]
Labs working on this lncRNA
- Department of Cell Physiology, Institute of Hematology and Blood Transfusion, Prague, 12820, Czech Republic. [1]
References
Sequence
>gi|223029487|ref|NR_026763.1| Homo sapiens SMAD5 antisense RNA 1 (SMAD5-AS1), long non-coding RNA
000001 TGATCTGAAA GGAATGGAAG CACAAAATGA TGAATAAGGT ATTTTTAACA AAGATACATG GGTAAATTAA CAGCAGTAAT 000080
000081 GTAAAAAAGA CTGAGGGAGC AACAATGTGG AAAGGGAAGG AAAGGAAGCT GTATAGGAAC AATCACACAA ATAATCATCA 000160
000161 AAATTAAACT TTATAAATCT AAACATAGTA TCTACAACCT TTATGAAGGT TAAGTTTTGT TAAATTGTCT AAGTTTTGCA 000240
000241 TTTTTACAAT TTTCACTGTA GAGAAAAAAA TATTAATAGT TACCAAAGGA ATAAAAGACT AAAATAATTT GTTATACATC 000320
000321 TGCAAATAGC TCCTTAAATT TGGAACACTA ATTTCATAAT GATATTTGGA TCCATAAATG TGAAACTGTC ACACTGAATG 000400
000401 TAGGTACTGT TTTCCCCACA ATGGATACTA CTGCATTGGC ATCTAGCAGA AATTGTAAGC TATTTGGAAT GTTACTAAAC 000480
000481 CTACTGGGAC TAAGGTTTTC AATCTTTTGT CTTTCAAATT AAAATTAAAA ACTAATTCAC TCTGGGCAAT TCAGGTACTC 000560
000561 TAAGGAAATT CAAGTACTCT AGTTTTAAAT ACGAATTTTC AAAAACGCAA CCCAAGTACC CTTTCCTCTC AACTTCTGTG 000640
000641 AGGCCAAGCC ACGACCTCCA CCTATTCAAT CTTTGCTGCT AGATAACAAC CCTTTTGGTA GTGCTAGGCA ACAGGCATGA 000720
000721 TGTGACAAAC CTAGACATCA AAACTTTTCC ACAGAAAGAT AAGGTAAACA AGATATACTT AGCGCCACAC CCATTTAAAT 000800
000801 GCACAAGCAA CCAAAATTGC TCCCTCCCCC CGCAACACCC CCCCCCCCCC CCCAAAGCTC CAGCTGGTCA GGAAACATTG 000880
000881 TCTTTACAAT CAAGATAAAC ATCTGGCTCA GGGTGTTCAG CCATTCCTCA CCTACAGGCT TGCCTAAGCC CCATTCTCCA 000960
000961 ATGCCATCAC CACCAGAACC GGAACATTCT GTTGGGAAGC CGGCAAACGT CCAAATACCC CAAGTATCCT CGCCCGAGTT 001040
001041 CTGCAACCAA AAATCTGTTT TGGCTACTGA GCATGCTCAG ACTTAAGACG GGCGCGCCAC ATGGGAGTTT TCAAAGCTTA 001120
001121 GGCTCCAAAC TCCACGTAGT AACAGCAGCT GAAAGGAGGA GAGGGGAAAA GGGGAGGGGA AGAGACTGGA ATATTAATTT 001200
001201 GAGCCCTGAT ATTGAAGTAT AGGACCCGGC CAGCGGCTGA ATATGGTGAA GGCAAAAAGA CGCTGCTTTG GCATTCTCTT 001280
001281 TGCAGCACAG AGAAGTTTAC ATGAAGTAGA AGAAATCCTT GCAGTGGTGA AAACTGACAT GGCAAGTGGC AGAAACCAGG 001360
001361 TCTAACTACC AGCTGATTGC AGTAGCCGGT CACAACTGCC CAGAGTGTAA TTCCCACCGA TAAGCGCGGA TCCTTATCTT 001440
001441 TGAAACACAA AGCGACGGCG GCACGGATTC ATCAAGCCAT TGGACAGCTT CGCAGTGCAG CAGCCCAGGC TGCCCGGCCG 001520
001521 AGCACCGCAG TCCTATCAAG GTTTGCTGTA GCTCAGAAGG CTCTGCCTAC ATGACTACTG CATACCCTAC TGGGAGAATT 001600
001601 GGAAGAATGT GATGATGGTA GGAGTCACCC AGCATAGAAG CATGAGTGAA TGACATCCCA GAGATCTGCA AAGGATCCTG 001680
001681 GTAGCCACTT CAAAGACTTT TTCTCCCTTC CTCAGACAAT CATGGCACAT GGACATCAGA GGAAGAAATG GCGAAGTTTG 001760
001761 TATGACTCCT CCAGCAGAGT CCTTGGAAAC AATAAAGCTT CCTTTCCAAA AAAAAAAAAA AAAAAAA
000081 GTAAAAAAGA CTGAGGGAGC AACAATGTGG AAAGGGAAGG AAAGGAAGCT GTATAGGAAC AATCACACAA ATAATCATCA 000160
000161 AAATTAAACT TTATAAATCT AAACATAGTA TCTACAACCT TTATGAAGGT TAAGTTTTGT TAAATTGTCT AAGTTTTGCA 000240
000241 TTTTTACAAT TTTCACTGTA GAGAAAAAAA TATTAATAGT TACCAAAGGA ATAAAAGACT AAAATAATTT GTTATACATC 000320
000321 TGCAAATAGC TCCTTAAATT TGGAACACTA ATTTCATAAT GATATTTGGA TCCATAAATG TGAAACTGTC ACACTGAATG 000400
000401 TAGGTACTGT TTTCCCCACA ATGGATACTA CTGCATTGGC ATCTAGCAGA AATTGTAAGC TATTTGGAAT GTTACTAAAC 000480
000481 CTACTGGGAC TAAGGTTTTC AATCTTTTGT CTTTCAAATT AAAATTAAAA ACTAATTCAC TCTGGGCAAT TCAGGTACTC 000560
000561 TAAGGAAATT CAAGTACTCT AGTTTTAAAT ACGAATTTTC AAAAACGCAA CCCAAGTACC CTTTCCTCTC AACTTCTGTG 000640
000641 AGGCCAAGCC ACGACCTCCA CCTATTCAAT CTTTGCTGCT AGATAACAAC CCTTTTGGTA GTGCTAGGCA ACAGGCATGA 000720
000721 TGTGACAAAC CTAGACATCA AAACTTTTCC ACAGAAAGAT AAGGTAAACA AGATATACTT AGCGCCACAC CCATTTAAAT 000800
000801 GCACAAGCAA CCAAAATTGC TCCCTCCCCC CGCAACACCC CCCCCCCCCC CCCAAAGCTC CAGCTGGTCA GGAAACATTG 000880
000881 TCTTTACAAT CAAGATAAAC ATCTGGCTCA GGGTGTTCAG CCATTCCTCA CCTACAGGCT TGCCTAAGCC CCATTCTCCA 000960
000961 ATGCCATCAC CACCAGAACC GGAACATTCT GTTGGGAAGC CGGCAAACGT CCAAATACCC CAAGTATCCT CGCCCGAGTT 001040
001041 CTGCAACCAA AAATCTGTTT TGGCTACTGA GCATGCTCAG ACTTAAGACG GGCGCGCCAC ATGGGAGTTT TCAAAGCTTA 001120
001121 GGCTCCAAAC TCCACGTAGT AACAGCAGCT GAAAGGAGGA GAGGGGAAAA GGGGAGGGGA AGAGACTGGA ATATTAATTT 001200
001201 GAGCCCTGAT ATTGAAGTAT AGGACCCGGC CAGCGGCTGA ATATGGTGAA GGCAAAAAGA CGCTGCTTTG GCATTCTCTT 001280
001281 TGCAGCACAG AGAAGTTTAC ATGAAGTAGA AGAAATCCTT GCAGTGGTGA AAACTGACAT GGCAAGTGGC AGAAACCAGG 001360
001361 TCTAACTACC AGCTGATTGC AGTAGCCGGT CACAACTGCC CAGAGTGTAA TTCCCACCGA TAAGCGCGGA TCCTTATCTT 001440
001441 TGAAACACAA AGCGACGGCG GCACGGATTC ATCAAGCCAT TGGACAGCTT CGCAGTGCAG CAGCCCAGGC TGCCCGGCCG 001520
001521 AGCACCGCAG TCCTATCAAG GTTTGCTGTA GCTCAGAAGG CTCTGCCTAC ATGACTACTG CATACCCTAC TGGGAGAATT 001600
001601 GGAAGAATGT GATGATGGTA GGAGTCACCC AGCATAGAAG CATGAGTGAA TGACATCCCA GAGATCTGCA AAGGATCCTG 001680
001681 GTAGCCACTT CAAAGACTTT TTCTCCCTTC CTCAGACAAT CATGGCACAT GGACATCAGA GGAAGAAATG GCGAAGTTTG 001760
001761 TATGACTCCT CCAGCAGAGT CCTTGGAAAC AATAAAGCTT CCTTTCCAAA AAAAAAAAAA AAAAAAA
