PRKG1-AS1

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Annotated Information

Name

PRKG1-AS1:PRKG1 antisense RNA 1


RP11-573I11.2 and ENST00000452247[1]

Characteristics

ENST00000452247 is an 869-bp natural antisense lncRNA transcript expressed from the RP11-573I11.2 gene.[1]

Expression

The expression of ENST00000452247[1].

ENST00000452247 is down-regulated in the RA(rheumatoid arthritis) FLSs(fibroblast-like synoviocytes) compared with normal FLSs. In addition, ENST00000452247 expression is positively correlated with ZNF154 mRNA expression and negatively correlated with WISP3 mRNA expression [1]

Diseases

Rheumatoid arthritis[1]

Sequence

>NR_038277.1 Homo sapiens PRKG1 antisense RNA 1 (PRKG1-AS1), long non-coding RNA

000001 TCTTCACCCC GCCCCTCCCT TGCTTAGTCG CTCGGCTGGC CCGGCTCACC TTCGGGGTGA AGGCTACCAG CGAGCGTTAT 000080
000081 AGCAGACGAC TTTAATAAAT GCAGGCGGCA GCAGGAACTC TGGGAACTTG GGTGCCCTTG CCTGGCAGTA AGGGTTGAAT 000160
000161 TATCCGGATC TGAAATACTT TACAGAGCCG AGGGGTGATA GGCTCTGCAA AAGCACTTTT TGCCCCTCTC CTTTATGCCA 000240
000241 ATACTCGCTG ACTGTGCACA CAAGTCATAT TCAGTATTAA ATACAAACCG GTCTGTAATT CAATGGCTCT AGCAAGACGC 000320
000321 CTCTGAGAGG GCCAGGTGGC GGGTGCAAGT TGCTCATTAA CCCTTTAGAG TCGCAGTTTG CAGATCTGAG TTAGATCCCC 000400
000401 GGCTTTGAGG TCCTTCAGTT GCCCTCCTCC CCCACCTCCC CCCGCCACTG CGAGAAAAAT GTGCAAAGAG AAGGAAATTT 000480
000481 GCACATCAAA CGAGGGGCAA TCGCGGCGGT AGATGAACTT GATTAGGCAG ACGCGTGAGA TCAAAGTGGC CGGGACCAAA 000560
000561 GCGGACAGGG TCCAACGTGC CAGCACTGCC AAGAGAAGGC CTTTTGTACT CAGGTTAAAT AAGAACATCC TGCAAGGAGT 000640
000641 CTGTTCTTTT ATGCAGCCTA AAGATCAAGT AATAATCATT GACACTGATA CTGAGCATGT CGATTTTGAA GAGACTAGCA 000720
000721 TGAACCTTGA AGAATCATGT TCTTCCTAGG AATTACAAAT CCCCCGATTC CATGTCTAAC ATAATTTCTA CTGGCCTCTT 000800
000801 TGCTTCTCAT GCTTTAGTAC CAGTGCTTCT GAATTTGAAA GTCTTCATGC AAATTGCCCA GCTGACAGGG CAGCCACTGT 000880
000881 TGAGGAAATG CTGATCACAA CATCACAGGT AAAGGAGAAT GTAATGAAGC AAGAACTGGC TCTTAAAGCT TCTGTTTGCA 000960
000961 GCAGTGACAA GGCTCACCTT TCAACCGCCA AAGCAAGTCA AAAAGCCAAA CCTGACTTAC ATGGCACAGA AAAGTGCCCC 001040
001041 AGGGAGGGAA ATCAGACATT GATGAACTGT GGCCAAAATC CAGCTGAGCC AGCGCTCAGG TCACCAGTAT CATTTCTCCC 001120
001121 CAGAGGACTA AGAGTCCTCC TGCAAATTAA CTCCTAGTAT CCTGCACTGA TGTACCAGAT ACCAGAGGTC TGTTGAAAAC 001200
001201 TTGCCTCGTA AATGATTTGC ATATACAAGA ACTCGGAAAA AGCATCCTGT TTTGTTGAGA GGTGCACCAA GTGACTTTTT 001280
001281 CATCATTGGT TTCATAACGA GGTCTGGTTA GCAGTCATTT CCAATTTTTC TTTTCGGTTG GACCATTGTC AATGGAGTCT 001360
001361 ATAAAATGAG ATATGTTAGA ACTTGACTGC ACTAATTTAT TTTTACAGAA TCTGCACAGC TTAGCAAAAC AGGAATACCT 001440
001441 GTATACAGAC TGATAGAATG TCATATATTA ATTTGACCTG CACATACATT TATACATTTC ACAGAAATGA CGCTGTATCT 001520
001521 CATTAACAGA TACACAGCTC TGGTACATTT AACAGAAATA AGAGAACAAC TTCATCATTT CTGTAATTCA TCAATATTAT 001600
001601 ATAATAAAGG CTTATAAATT GTTAGCAGAA AGAACTGTAA AACGCAGCAA GCTAAGAAAG GACAACATTT TGAGGTGTGT 001680
001681 TTGTCTTTGT CATGCAGCAT AACACCAAAT TTGTTTTTTT AATAGGATGC CATGAATTTA AGGCACTTGC AACAATGCCA 001760
001761 GATAGCCAGG TCATGTTCTA AACTATGGGA CAGATGAATA ACAGTACAGT TGACATAATT TTCAATAATA CTGACAATTA 001840
001841 TGACATTAAT TCAAGTCTAC TTGGACCTAA AAACATTATT CAATACAAAT AAAATGAAAT AATAATGCTG TGAAACACTA 001920
001921 AAAAAAGTTA TATGTACCAC AAAATATCAC ACAAAAATAC CTATTTACAT AAATATTTGT CTGTGGTCCT ATAGTGAAAG 002000
002001 AAAACGTTGT TATGGATAAT GCACAGATCA CCTCTATTGT ATGAAATCAG TTCTAATATC CTTATTTTCA ACATGGTAGC 002080
002081 TGACTTCATT AAATTTGTTT ACCATCAGTT CAGTCATTTA GAAATGAAAC AGGAAAAATT CAATAGTTGA GTTTATTACT 002160
002161 ACACATGTGT AATTCACATG CATATTCCAC AATTTTAGGT AAAAATTATG ACTTGTAAAG AATATAACCA AAATAAATTT 002240
002241 GTTTTGAATG CCAAAAAAAA AAAAAAAA

Labs working on this lncRNA

  • Department of Clinical Laboratory Science, Jinling Hospital, School of Medicine, Nanjing University, 305 East Zhongshan Road, Nanjing, 210002, China.

References

  1. 1.0 1.1 1.2 1.3 1.4 Zhang Y, Xu YZ, Sun N, Liu JH, Chen FF, Guan XL, Li A, Wang F, Zhao QF, Wang HY, Song SS, Yu W, Zhao JN, Li XJ. Long noncoding RNA expression profile in fibroblast-like synoviocytes from patients with rheumatoid arthritis. Arthritis Res Ther. 2016 Oct 6;18(1):227.