NONHSAT146517

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT146517

Source

NONCODE4.0

Same with

,

Classification

sense

Length

3512 nt

Genomic location

chr17+:19577397..19580908

Exon number

1

Exons

19577397..19580908

Genome context

Sequence
000001 TTTTAAAAAA AGGTTTGACT TTGGAATTCA TGGCAGCAAA TGTCGTGAAA TCAAGGTGTA GTATACAATT TAGGGGCTAC 000080
000081 TTTCTTTGCC TTCCTGAGGC TGGAGGTGTG GTCGGAAGCT TACTTGGGTC TCTGGTCAAT ATCTGTCTCT TTTGTTCTTT 000160
000161 TCCCAAGACC TCGGTTCCTC AGTTTGATAA TGCATCTTGG TAGGATAGAA TATTTTAGCC TCATGGAAAA TACGGAGGCC 000240
000241 CAGGCTGAGT CTGCATTCTC CAATCTTACC AAACCCCCAA GAAGCCTCCC TCAGGTGCAG TGCAGTGTGC CAGGCAGGTT 000320
000321 CGAGTTCCCA AAGGGTTTGG CAGGCATGTT TCTCTGTGAG GGTCTAGAGA AGCAGCAATA TATAAAAGAA GCAGCAATAT 000400
000401 ATAAAACCTT TAGCAGAAAC AAAAAAATGT GGTTTGATTC ctggctcaat gaacttgggc aaggcctttt ctgagctctt 000480
000481 tcttgggcct cagcttgctc atctacaggg tgagggagta ggtgtcagtg attccccagg ccactttcaa ccctTCCGCT 000560
000561 CAATTCTCAT TACTAATAGT TGTTAATATT TCTTTGGATT CAATCTGGAA CTAGGTAGAG ATTTGGTTTT CTTTTCCACT 000640
000641 TTGCTGCTTT TCTGCTCCTT TCTGAGCTTT TAATCCTCTT TTTATCAAAT TACCTTTTAT TTAAAATAAA TGACTTTGAA 000720
000721 TCTGTACTGT ATATTTACCT GAATAGTCTA TTTATTGTAA TTACATTTTT CTGAAATGGC TTTTATGTAC TTAATAGTTT 000800
000801 CCTTATTTTG TTACACTCTT GGATTTTATT TTATTAATTA CCTTACTAGA ATTAGAAGGG ATTTAGAGCA GAAGTATTGT 000880
000881 ACACAAAGTA AAGTTCCAAT AAAGCTTATA AGCTACAGAA GGCATTGTGG GAGATGTGGG TTTTAAAAGG TCGAGAAACA 000960
000961 TAAGAGGTTA ATGTTGATAA ATTTCATTAG GCCTTTGACA ACTAAATATG ACATTTGAAC CTTGAGATTG CAGCAGCCCT 001040
001041 TCCTCAGTCT TCAATAGGAA GGATTAAATT CAGTACTACT TTTGAATTTT AGAAACAAAA TTGTATACCA GTTTTTGAAT 001120
001121 TCCATGTAGA GACTTCAGCT TCCTACTGAA AATGCTAGGA TAATAAGTTA GTACTCTCAT CTTCTGTCTC TACTCTGACA 001200
001201 TTAGCTAGTT GACAGTGGAC AGAATATAGC CTTCATTATC ACGTTGTCTT ACTCTTATTG TTATTGTTGT TTTTTGAGGA 001280
001281 AGGGCATAAT CCTTTGGCCT AAACCGTGCT TCCTAGGCTT CCTAGGGATA TGTAGTCCTT TTTTGTACAA TGCATGTAGA 001360
001361 GTCTCTTCAG ACAGGAGGTG TCTGAGTCCC AGTGCTGAGC TTGTGTTGCA AGGCTGGTTG TGGGTAGGTT TTTAAAGCAG 001440
001441 CTGAGTAAAC TGAATCCTTT TTTCCTCTCT CCAGGCAGAA TATTACTGAA GAATGATCCT GTTCAACCTC CTAGTGCCTC 001520
001521 TACTGAATTA TTCCTCTTTT AAATGGTTAA TGAACCAATA ATTTTTAAAT CATACCAAAA ATAGTAAGAA AATATGCAAA 001600
001601 CACTCTGTGA TCAAACTTAA AAGTCATTGC CATTCATCAT TAATAAAAGT TGCCATTTCA ACTACGTCCC AACATTCCCT 001680
001681 AATAGGGTAT TCAGGGAACC TGTCTTAAAT TGTGCTTATC TAAATCTTGG AACTTTGAGC TAGGGGAGGA GAATGTATTA 001760
001761 GACTAAATAC AAACTGCGGG GTTGTAAGGG AGTCTCAGAA CCTCACTGAA TCCTTCACTC CAGTTAATGG CACTGCTCAC 001840
001841 TTCCTGCCTC TGCTGCCACC ATCACTGTGT GAAGCTTTCA AGAGCTTGGT ACTTCCCAGG GCTACCGGCA GTCCTCTGTA 001920
001921 GTCCAGAGAG GTGAGATTAG ATCTTCTTGG TTCCCTGTGA GGTTTCAGGC ACTAAAACTC TATGTGGGGA AGGGAGGGGT 002000
002001 TACTCCTCCT CCAATGGGAC TCAAGGACTT GACCTCCAGG AGTAGGCCCC TGGTCAGAAG TGCCATCTCA CCAGTGGTCT 002080
002081 TCATTCTTCC TCATTCATTC TTTATCATCC TGTGTTCTGT TTAGTTGCAA CAATCTCTTG TGACTAATGT CACTCAAAGC 002160
002161 ATCTTGTAAA TCCTAGGGCT TCCTGGAAGT TAGTTGCCAA AGTCATGCAA GCATCACCTG TCATTCTTGT GTTGGAGTTA 002240
002241 TAGAATTCTA CATCTTATAA AACCTAACTG GCATTTAAAA AATACTGTgg ccgggcgtgg tggctcatgc ctgtaatccc 002320
002321 agcactttgg gaggccgagg tgggaggatt gcttgagtcc aggaatttga gaccagcctg gacaacacag tgagacctca 002400
002401 tctctatcaa aaaataaaaa ttagctagat gtggtggcat gagcctgtgt tcccagctgc ttaggaggct gaagcaggag 002480
002481 gattgattga gcctgcgagg ccaaggctgc agcaggctgt gattgcacca ctgcacttca gcttgggcaa cagagcaaga 002560
002561 ccctgtctcc gaaacaaata aaaaaTACTG TAATAAAAGT ACTTATAAAC ATACTAATCC TCTTTCAGGA CCCTAAAGTT 002640
002641 GCAGGTTAGT AGGTCTTCAA GGACAAATCT GTAAGTTTCT TATTTCTGTA GTGCAAGTAA AATTTCACTT TTTGAAACTA 002720
002721 TAGAGAGATC CCTTTCTGAT TAGCCTACAG AACTTAAAGT GAGGGAACCA TTTCCTCTCA CAGACAAAGA GGCCTGGGAT 002800
002801 ATTAGGACTT TGGGGTTTGA GAGCATCATG GGGCAGACAG ATGGTGGATG GTCTGGACAA GAAGCGAGTA AGCCACTGCG 002880
002881 GTTGGTCATA CTGAAGGGAA TTGATGGCAA GAGGATCCCC TGAGCAAGTC AGAAGTTACT CTCATCAGTC GTTCATGGTC 002960
002961 ACAACCTGAG GTACTCTGCT GAGTGGGCAA GGCTGAAGAA GAGGCCTGTG GAATGCAGCA TTACCTGCTG GACAGAGCAG 003040
003041 GGCAGGCAGT TCTATGCCTT GGAGCTCCTG ACTGCAGGGA CTCTGTCCCC ACACTCAAAA AGACTCAGCT CACTCAATGA 003120
003121 GAGAATGTGA TTTACTTTAT AGAACGTATA ATCAACTTTG TTGAATAATT TGTTCTATTA AGGCTGTCTA AAGTATGTGA 003200
003201 TGTCTTCATC ATAGTATGAA GTGTTGAAAA TTAATAACGA GCCTAGTTTA GGAAAAAGCT GCTTAAAACT GTGGCTCTAA 003280
003281 GAGAGTAATC ATAAAATACC TTAGATAAAA TTGCACTATG GAATTTTCAT TGAGTATGTT TAAATTATTG GCTTGTCTAC 003360
003361 TAATACACAT CTGCTTCAAA ATGAACATAT TTCATAAAAT TGGCATCAAT TTTAATGACG CTCCTGGTAT GGAACCTCAG 003440
003441 ATATACCCTA TTGGAGACAA TCCTTTGATC ATAAATTCTC CCCAACTATA AATCATTTTA TGTCTTTATC AT
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Predicted Small Protein

Name NONHSAT146517_smProtein_3317:3490
Length 58
Molecular weight 6492.7362
Aromaticity 0.105263157895
Instability index 58.8736842105
Isoelectric point 5.97662353516
Runs 9
Runs residual 0.00394736842105
Runs probability 0.0426112386898
Amino acid sequence MEFSLSMFKLLACLLIHICFKMNIFHKIGINFNDAPGMEPQIYPIGDNPLIINSPQL
Secondary structure LLLLHHHHHHHHHHHHHHHHHHLHHHHHLLLLLLLLLLLLLEELLLLLLEEELLLLL
PRMN LLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
PiMo iiiiiiiiiTTTTTTTTTTTTTTTTTToooooooooooooooooooooooooooooo