NONHSAT146407

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT146407

Source

NONCODE4.0

Same with

,

Classification

sense

Length

3298 nt

Genomic location

chr17+:18699119..18710027

Exon number

4

Exons

18699119..18700981,18702125..18702256,18707451..18707579,18708854..18710027

Genome context

Sequence
000001 cataactttt attagattat gttgttataa ttgttctatt tttatttctt attaatctct tactgtgcat tatttataaa 000080
000081 ttaagcatta tcataggtat gtacttacag gaaaaaatat agcatatata aggtttggta ttaaccacaa tttgaggcat 000160
000161 ctgctggggg tcttggaatg tatcccctgc agataaggga ggactactat actttatgaa tttattaatg gtaagatcta 000240
000241 gtggcaggtc taataactac tttcaaagca gtggtgagcg taaacaatat gttaagataa ctgcagcaag tatagtacaa 000320
000321 aatgaaaaat gtctgtggtt tctattgtgt cagggtgttt ttaattttac ctatattcat agtttgttgt ctacattcat 000400
000401 aatttaatga tatgctaact actttcaaag cagtggtgag cataaatagt attttgaggc cgtgcgtggt ggcttacgcc 000480
000481 tgtaatccca gcactttggg aggccaaggc gggtgaatca ctgaggttgg gagttcgaga ccagcctgac caacatggag 000560
000561 aaaccccatc tctactaaaa atacaaaatt agctgggcat gatggcgcat gcctgtaatc cctgctactt gggaggctga 000640
000641 ggcaggagaa tcgtttgaac ccgggaggca gaggttgcgg tgagctgaga tcgccccgtt gcatgccagc ctgggcaaca 000720
000721 agagcgaaac tctgtctcaa aaacaaaaaa caaaaccaaa caaaaaacaa aactacaata ttttgaggta actgcagcaa 000800
000801 atatagtaca aaataaaaaa atgcctgtga tttctattgt gtcagggtgt ttttaatttt acctacattc atagtttgtt 000880
000881 gtctacattc ataatttaaa gatatgctaa attttagcca gaggttaatg aaaatgaagg taacattttt ttttaaccca 000960
000961 tcgaggttca cagaaccact gaatctatta gtggacacca ttaattaaac atccatgGTA CTgttgattc ttatttatct 001040
001041 tttatatttc attccaaatg ttgactcctc agagagtcat tttctgatac ccagactaga tccaatttcc ctgttatact 001120
001121 cttcaagcat ctcacacttt tcccttgcag gacttaactc agttggtaat ggtacatttg tgcattggtt gtctgcctct 001200
001201 cttcacctct ttccctgagg aaggagttgg tatctgttag tcactgttgt attaccagca catagtagat gctcagtaaa 001280
001281 tatttgttga gtaaataaaG ATTAGGAAAG CTATCAAACT AATTTATTAC CTTAGTAAGT AGGAAAAGAG CTTGGTAACT 001360
001361 TGAGAGACTG ACTGAAGGCC AGTGTCTATA ATCATTTTCA GGGATATGTA GTTGTAAAAT ACATGTAGCT ATAGTCAGGA 001440
001441 TGTAAAGTAG GTCACAGTAA CCAAATAGCA AGGGGTTTAG GGAAAATTAG GGAACTGGAG AAAGGGCAAA TTGTTCATGA 001520
001521 GGGAAAAGAG AAGGTGTAAT GTTTATGGGT GGACTTGTTG CTTGCTCTGT CACCTCTACC CCTATTAGTC CTGCCATTAC 001600
001601 CATTTTACTT AATCACTTAG CCAGGCCTGA TACATAGTAG TCTTTGCTAA CTGGATATTA TGGAGGTAAA GCTGAAGGTT 001680
001681 TTTGTTTGTG AAATGTTACA CTAAGATAGG AGCTTGTGAT AGATCTTTAA ATAATGCTTT TAAAATGTGC CTGTTTATAT 001760
001761 TAATCTTCAC CAGAATGTCA CAGGTAGACT AATGGTTGGC CTACGTTGGT GGAATCACAT TGATGAAGAT GGAAAGAGCC 001840
001841 ATTGGGTGTT TGAATCTAGA AAGGAGTCCT CTCAAGAGAA TAAAACTGTG TCAGAGGCTG AATCAAGAAT CTTTTGGTTG 001920
001921 GGACTTATTG CCTGTCCAGT ACTGTGGGTG ATATTTGCTT TTAGTGCACT CTTCTCCTTC AGAGTAAAGT GGTTGGCGGT 002000
002001 GGTTATCATG GGTGTGGTGC TACAAGGTGC CAACCTGTAT GGTTACATCA GGTGTAAGGT GCGCAGCAGA AAGCATTTAA 002080
002081 CCAGCATGGC TACTTCATAT TTTGGAAAGC AGTTTTTAAG ACAAAACACT GGAGATGATC AGACTTCCTG AATAGAGAAA 002160
002161 GCTTATGTGC TTTGTTACAT TGGGGAACAA CTGAAGAGAT TCTTGACTCA ACCTTTTAGA GCTTAGTCCA TGTTGCAACG 002240
002241 AGGAGTGTTG GCTTTGTTTT TCCACTTAAA AACTTTATTT ATAAAAAGGA AAAGTAGTTT TCATATTAAG TTTTTATTTC 002320
002321 CTTTCCAGCA GTTGGGGCTA GAAAGTATGT GTTGGCACTA GAAACATTGT CAAGATTTGT TCTGTGGTGT AGGTATGCAC 002400
002401 ATTCCATAGG TATGCACACG GCCATGTAAT ATCAGTATAT CCCAAGTTAA TGAAAGTGTT CATTTACATA GGTAATGGAG 002480
002481 ACCTTTGCAT TTTGATCCAT AGAACATAGG AGGATGTTCT TAGTCTGTCT CAAAGCTCTA TATGTTTACA TATTATTTCT 002560
002561 GTAGATTGTT TTCAGGAGAA AGTTTTGCTT CTATGGTAAG AGTGAGCACT TTGGCTTATG TATAAGTTAG AAATAATTGT 002640
002641 TAGTTTTTAA TATGCACTTC GTGGGGAAAT TTCTTAGACG TATGCAAGCA AGTGAAAACA ATTAGGGCCA GTGGTATTAA 002720
002721 CTACTTTATA AAATTTTATT TTTGTTTGTA AGAAGTCATC TATTTAAGGC CCAGTTAATA TAAGTGGAAT CATCATAGTT 002800
002801 TAAGGAATAC CCAGAGATTG CTGCTGTTCT ATTTATTTTA CAGAAAGGAT AGCTAGATTG AAAGCTCTTC AGTGGACCTT 002880
002881 GAGCTAATAG ATCTTTTACC ACTAAAAGAG CATTATTCTC ATGTCATAAT GAGAATAATA ATTTACATAC TTGGCATAAT 002960
002961 AAATGCCTAA AAGACATTTT ATTTTCTGAA TCTATTTTTT TCTTGCTATA ATGGGGATAT TGTAAATTAT GCATTTGTAT 003040
003041 TAATGGTATT TCTTAAAGCA ATCTATGTAA CTGTAAATTA AACCAATCTA CAAACTATTG TAGGCATCTG TAAATTCTGT 003120
003121 TGTAGGTATT ATAAACTTTG TTGAAGTCTT AATCAGCAGA TTATGTTGTG AATATATTTG TACATTGTTA AAATAGTTTT 003200
003201 TAAGATTATT TGTTTAATTG AATAAGTGTC TTATTGGAGT GATAGCTTTG AAGGTGCAAA Actttatatt tgtataaaat 003280
003281 tctactattt acaaggca
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Predicted Small Protein

Name NONHSAT146407_smProtein_215:406
Length 64
Molecular weight 7297.4177
Aromaticity 0.142857142857
Instability index 42.2365079365
Isoelectric point 9.50970458984
Runs 11
Runs residual 0.0296404275996
Runs probability 0.0509627274333
Amino acid sequence MNLLMVRSSGRSNNYFQSSGERKQYVKITAASIVQNEKCLWFLLCQGVFNFTYIHSLLST
FII
Secondary structure LEEEEEELLLLLLLLEELLLLEEEEEEEEELLLLLLHHHHHHHHHHLLLLHHHHHHHHHH
HLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHH
LLL
PiMo iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTT
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