NONHSAT145941

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT145941

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

947 nt

Genomic location

chr17+:16342301..16345340

Exon number

5

Exons

16342301..16342374,16342641..16342728,16343499..16343567,16344388..16344444,16344682..16345340

Genome context

Sequence
000001 GGATTGGGAT ATTCCGACTC CTTAAGGGCC TGGCGCACAT AAGGTGTGAC CTTTTCATTC CCGTTGTTAT GGAGGGCCAC 000080
000081 ATCTGCCAGA GCCTGGAGTC TGCGAAGGCC GGGACCCGGT TCCCCGGCCC ACAGTGGGGG TGTGCAAACC CGAGAGAACT 000160
000161 GGGTTGCAAA TTCGTGAAGA ATCAGCATCA TGTTTGGCAG CTGAGTATTG GAGCCAGGAG CCTGCCATGA GGTTTTGAGA 000240
000241 ACAGAGTGCT GTTTTAGAGC TGGCAGCAGC ATCTCAGCCC AAGAGAAGGT TATATTCCCA GAGGATGTCA GTCCCAAGGA 000320
000321 CCAGTAGCTG CCATCAGTTT GGATTCTGAA AACTAACTGG CATCAACACT GGGTGTAGAA ACATGCTTGC CTTATGTATC 000400
000401 AGAGGACATG CTCAGCAGAT CCAAGAGATA TATTTGGCAA CTTTTTCTAG AAAAGGCACA TTGGGTATCA TTCATTACAT 000480
000481 TCTTGAGttt ttttgggttt tttttttttt ttttgagaca gtcttgctgt attgcccagg ctggagtgtg gtggcacaat 000560
000561 cacagctcat tgcatcctca atcacccagg cctaagcaat cctcccacct tgtagctggg actacagctc acagcacacc 000640
000641 tggctaaaat tttttttttg ttgagacgga ttctctatgt tgcccaggct ggtctcaggc tcctgggctc agatggtcct 000720
000721 cctgcctcag cttccaaagG CACAGGCCAA GTTGTAGCTT TGTCCCTTGC CATCATGCCC AACAAGAGGT TCTATACCTT 000800
000801 TTAATGAATT GACTTTCATA AATTGGTTAT GTTGGTGGGC AAAGTTCTTT AAGCTGGAAA TTGTAAATTC CTCCTGAAAT 000880
000881 GTTTTTTCAT GCAGTTACCA TGAACTAATA CTACAATAAA GGATGGTCTT GGGTGTCAAT TCTTGAA
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Predicted Small Protein

Name NONHSAT145941_smProtein_407:646
Length 80
Molecular weight 9214.4964
Aromaticity 0.189873417722
Instability index 66.6151898734
Isoelectric point 10.4531860352
Runs 11
Runs residual 0.00104040228889
Runs probability 0.0156091920798
Amino acid sequence MLSRSKRYIWQLFLEKAHWVSFITFLSFFGFFFFFLRQSCCIAQAGVWWHNHSSLHPQSP
RPKQSSHLVAGTTAHSTPG
Secondary structure LLLHHHHHHHHHHHHHHLHHHHHHHHHHHHHHHHHHHHHHHHHHHLEEELLLLLLLLLLL
LLLLLLEEEELLEELLLLL
PRMN LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLL
LLLLLLLLLLLLLLLLLLL
PiMo iiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTTooooooooooooooooo
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