NONHSAT145418
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT145418 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1195 nt |
Genomic location |
chr17+:7489787..7491135 |
Exon number |
2 |
Exons |
7489787..7490589,7490744..7491135 |
Genome context |
|
Sequence |
000001 GAAAGTTTTA AGCCCTTTTA GAAACCTAAT CATCACCAGT GGAGGTGATC TTGAGAAGGG GTGAGCATCC CGAGAATGGC 000080
000081 CACGATTCAG AATGAGCCAG TCCCGTGTGG GGGCTGTAGA GAAGCGTGAT CAGAGCATAG TGTCCCTGGA TGGATGGGCT 000160 000161 ATGGAGGCTT TCCCTGCCTC TTTCTAGGCC CGCCTTTCTT CCTCCCAACT CTTGACTCTG CAGCTCTTGG GGTGAAGCCT 000240 000241 TATTCCTGAT GCTCCAGACG ATCACCATCT GCTTCCTGGT CATGCACTAC AGAGGACAGA CTGTGAAAGG TGCTGGGGAC 000320 000321 TTACCCAAGA GCAGGCTGTG TGGTTCCTGG GAACCCTGCT GGGAACTCAG GTCTGGGAAA GCCAAATGAT GTGGAGAGAT 000400 000401 TGACAAGGAC TCCTGTCTCC CCACCCCTAG GTGTCGCTTT CCTCGCTTGC TACGGCCTGG TCCTGCTGGT GCTTCTCTCA 000480 000481 CCTCTGACGC CCTTGACTGT AGTCACCCTG CTCCAGGCCT CCAATGTGCC TGCTGTGGTG GTGGGGAGGG TGGGTACCAG 000560 000561 GAGCAAGGGA CAAGATGTTG TGGGGGCAGG GTGGGGGGGA AGAGTAGAAG ATCAAAGTGT GGGGGTGTTG TACTTGGGGG 000640 000641 AGCATGGGAA GAGCTCAGGT GACAGAGCCA AAGGTCTCAA CTCCTCCCCT AGCTTCTCCA GGCAGCCACC AACTACCACA 000720 000721 ACGGGCACAC AGGCCAGCTC TCAGCCATCA CAGTCTTCCT GCTGTTTGGG GGCTCCCTGG CCCGAATCTT CACTTCCATT 000800 000801 CAGGAAACCG GAGATCCCCT GATGGCTGGG ACCTTTGTGG TCTCCTCTCT CTGCAACGGC CTCATCGCCG CCCAGCTGCT 000880 000881 CTTCTACTGG AATGCAAAGC CTCCCCACAA GCAGAAAAAG GCGCAGTAGA GCCAGCTACT GGAGTCATTC CGTTTCCACT 000960 000961 CATTCACCCA ACCTCAGGGT TCTCCCCATC TGAGCCAGCC TGCTGGTGTG ACTTACTCAT CCTCCATTCC TCTGCACTTG 001040 001041 CAGACTTTCT GAGCCAGGGT TTTCTTTTAG TGGAAACAAA TGGTTGATGG ATCCAGATCC TTAGAAAAGG AGAGGATGGG 001120 001121 GGTAGAGTCT CCCAAGCCAA AATTTTGACA TTTGAGTGCT TTCGTAAGCC CTGTACATGT ACTATTAATT CAGTC |
Predicted Small Protein
Name | NONHSAT145418_smProtein_248:388 |
Length | 47 |
Molecular weight | 5197.1137 |
Aromaticity | 0.0869565217391 |
Instability index | 56.997826087 |
Isoelectric point | 9.35308837891 |
Runs | 7 |
Runs residual | 0.00918737060041 |
Runs probability | 0.0372851843441 |
Amino acid sequence | MLQTITICFLVMHYRGQTVKGAGDLPKSRLCGSWEPCWELRSGKAK |
Secondary structure | LLEEEEEEEEEEELLLEEELLLLLLLLLLLLLLLLLLHHHHLLLLL |
PRMN | - |
PiMo | - |