NONHSAT145134

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT145134

Source

NONCODE4.0

Same with

,

Classification

sense

Length

726 nt

Genomic location

chr17+:4859462..4860424

Exon number

3

Exons

4859462..4859976,4860126..4860184,4860273..4860424

Genome context

Sequence
000001 CTCACCATAG CCTGCCTCTG CCCCAGCTCT GCCCACTCCA GCTACAGTCT TACCCACCAA CTCCAAGCTT ACCTTTCCCC 000080
000081 TGGCACCTGA CTTACCCACA CCTTGATCTC AAGACTTTGT TTGACTAATC CTTGGCCTGA CTCCAAGAGC TTTGCCCCTG 000160
000161 TGGCTCTGTC ATGACCCCCC ACCCCCAGCC CACACCATTC CTCTCTCAGA TTCCGCTGTT CTCAGCAGCA TCTCAAGAGC 000240
000241 CCGAAATCAA GATAAGTCTT TTCCTCTCCT ACTTCCCAAA GAACTTAGTC ACTGCCCTCC CTGCAGAGTG CTTGCTACCC 000320
000321 AAAACAGAAG GGAGAGGCCC CACCCAACCC CTGCTTTCCC ACTGAGGAGG TTCTAGAAGG CCACATCAAA TGTCCTCTCC 000400
000401 ACTCAGGTGC AAACTGGCTC AGTCTAATGG CTGGGGGGTG ATGGTGAGCC ACCGCTCTGG GGAGACTGAG GACACATTCA 000480
000481 TTGCTGACCT TGTGGTGGGG CTCTGCACAG GACAGATCAA GACTGGCGCC CCCTGCCGCT CGGAGCGTCT GGCCAAATAC 000560
000561 AACCAACTCA TGAGGATCGA GGAGGCTCTT GGGGACAAGG CAATCTTTGC TGGACGCAAG TTCCGTAACC CGAAGGCCAA 000640
000641 GTGAGAAGCT GGAGGCTCCA GGACTCCACT GGACAGACCC AGGTCTTCCA GACCTGCTTC CTGAAATAAA CACTGGTGCC 000720
000721 AACCAA
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Predicted Small Protein

Name NONHSAT145134_smProtein_389:643
Length 85
Molecular weight 9241.6256
Aromaticity 0.0595238095238
Instability index 50.3607142857
Isoelectric point 9.65985107422
Runs 15
Runs residual 0.0445859872611
Runs probability 0.0315609727375
Amino acid sequence MSSPLRCKLAQSNGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQL
MRIEEALGDKAIFAGRKFRNPKAK
Secondary structure LLLHHHEEHHHLLLLEEEEELLLLLLHHHHHHHHHHHHLLLLLLLLLLLLHHHHHHHHHH
HHHHHHLLLLLEELLLEELLLLLL
PRMN -
PiMo -