NONHSAT145049
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT145049 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
983 nt |
Genomic location |
chr17+:4062512..4063810 |
Exon number |
3 |
Exons |
4062512..4063199,4063400..4063426,4063543..4063810 |
Genome context |
|
Sequence |
000001 ctggtctcga aatcctgacc ttgtgatcca cccacctcgt cctcccaaag tgccaggatt gcatgcgtga gccaccgcac 000080
000081 ctggccAAGC TCTTTCTTAA AGATGATCAA GGCATCCCCC ATTTAAGCCT CCTCAGGGGC TCCCCTGATC TATAAGGACT 000160 000161 GAGTGCCAGC TCCTCTGCTG CGTGCCACAC GAGGCCCTTC TGtggcctct ctcctcttag gcctgtacct ttcccatctc 000240 000241 ctcccatgtg cacctcctgt ccagcctccc tctcactgcg ttatgtctgc agtgccttca cacaagctgt ttcttttgcc 000320 000321 tggaatgacg cttcttcctc cgttgaatta atccaccccg tattgcttca atattcagct caatcaggcc cctcttggga 000400 000401 gccttcatta actgttgggc cagcagtgag ctatagacgc actttccctg ctccatggct gtgctcatat cacagtgggc 000480 000481 tcttaccatg aacttcctat caacctcttg cactggacct cagacactct gaggacagag ccccagtgtg attcagctcc 000560 000561 atacccctat atccacatga ctcagcTCCG TACCCCTATA TCCACGACTC AGCTCCATAT CCCTATATCC ACAACTCAGC 000640 000641 TCCGTACCCC TATATTCACA TGACTCAGCT CCGTACCCCT ATATCCACGA CTCAGCTCCG TACCCCTATA TCCACATGAC 000720 000721 TCAGCGCCGT ACCCCTGTAT CCACGACTCG GCTCCATACC CCGATATCCA CGACTCGGCT CTGTGCCCCT ATATCCACAA 000800 000801 CTCAGCGCTG TACCCCTACA TTCACGCAAC TCAGCTCCGT ACCCCTATAA TCCACTTTAC TCAGTGCCGT ACCCCTATAA 000880 000881 TCCACATTAC TCAGCGCTGT ACCCCTATAT CTACATGACT CAGAGCCTTA CCCCATATCC ATGTGACTCA GCTCCTCACC 000960 000961 CCTATATCCA CGTGACTCAG CAC |
Predicted Small Protein
Name | NONHSAT145049_smProtein_245:490 |
Length | 82 |
Molecular weight | 8782.9039 |
Aromaticity | 0.123456790123 |
Instability index | 68.7135802469 |
Isoelectric point | 6.68231201172 |
Runs | 12 |
Runs residual | 0.00596844084703 |
Runs probability | 0.0378761114056 |
Amino acid sequence | MCTSCPASLSLRYVCSAFTQAVSFAWNDASSSVELIHPVLLQYSAQSGPSWEPSLTVGPA VSYRRTFPAPWLCSYHSGLLP |
Secondary structure | LLLLLLLLLLHHHHHHHHHHHHHHHHLLLLLLEEEEHHHHHEELLLLLLLLLLLLLLLLL EEELLLLLLLLEEHHHLLLLL |
PRMN | - |
PiMo | - |