NONHSAT144495

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT144495

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2805 nt

Genomic location

chr16+:89296128..89298984

Exon number

2

Exons

89296128..89296149,89296202..89298984

Genome context

Sequence
000001 TGATCCTGTG TGAGCAGCGT AGGCTCTGGT TGGTTAGTCT TAGGTATCCA GATGTGATCC TGTGTGAGCA GCGTAGGCTC 000080
000081 TGGTTGGTTA GTCTTGAGGA TCCAGATGTG ATCCTGTGTG AGCAGCGTAG GCTCTGGTTG GTTAGTGTTG AGGATCCAGA 000160
000161 TGTGATTCTG TGAGCAGTGT AGGCTCTGGT TGGTTAGTCT TGAGGATCCA GATGTGATCC TGTGTGAGCA GTGTAGGCTC 000240
000241 TGGTTGGTTA GTCTTAAGTA TCCAGATGGG ATCCTGTATG AGCAGCGTAG GCTCTGGTTG GTTAGTCATG CTCTTAGGCA 000320
000321 TGACCCACCT GTAGGGTCCC ACACTGGCCA ATGTTGGGGC ATAACACAGC TCTACAtttt atgaaaatgc ccttgttcct 000400
000401 ctcccatacc tgatcccttc agataaaaca ccagggtgca aggaggggca gagtggagag gggcgaggtc tgtaccctga 000480
000481 gatgcccccg tttcatggcc gtggagggag aaccaccacc ccccacgtgg ggaggAGGGA ATTCCTGTAC CTTAGGCAGT 000560
000561 GCCGGACGGG TGAGAGCCCT GAGTGTCCTT GTTGACCTCC AGATCCTCTT CACAGCATGC AGAGCGGTCC TGGCAGCTGC 000640
000641 TGCAATCTGG CACTCCTGGG GCAGCTGCTG CGATCCGGCA CTGATGAGGC AGCTGCTGTG ATCCGGCATT CATGGGgcag 000720
000721 ctgctgcgac ccggcactcc tggggcagct gctgcttgtg tgtgtgctgc tcctttgtgt accatgaaaa cagaccaggg 000800
000801 acacggctgg tcctgatgtt ctgtggcgct tggccctgtc actggcgctt cttggatgag gcccttaaac acacacagtg 000880
000881 gcagagcaag acttcatgtg agtgacacga atgtgtgtcc tctggctgca gcaatcctgg gttatgtttt ttgtggccat 000960
000961 cagggcagca gctgcttggt gactgtttct gtggtgttga atccccacgg tataaaggta atctacaacg aggtgaacaa 001040
001041 taaatcctgg atGGACAGAC CCGTGCACCT TCATATTACG TGTTTGAAAT CCTGGATGGA CAGACCCGTC CACCTTCATG 001120
001121 TCACGTGTTT GAAATTCTGG ATGGACAGAC CCATGCACCT TCATGTTACG TGTTTAAAAT TCTGGATGGA CAGACCCGTG 001200
001201 CACCTTCCTG TCACATGTTT GAAATCCTGG ATGGACAGAC CTGTGCACCT TCATGTCACG TGTTTGAAAT TCTGGATGGA 001280
001281 CAGAGCCATG CACCTTCATG TTACGTGTTT GTTGTGGAGA GGAGTGGGTT GTGCCATGTT TCTCTTGTGG GATTGAGTGT 001360
001361 GGCTATTTAG CTCATCTGTT GCCACCTTTA ATTGTTGGCA TTGACACTAA AGGTCATCAG ATTAGCGGGA ACCAGCTTGT 001440
001441 GGGGTTGTAG CGGCTCCTGG ACTGGTCTCA GGTGACATCC TGATTGGCTG AAATAAGTCC TGCAGGTCTC TGCTAGAACT 001520
001521 GACTCACAGT TGCCTGAGTC CAGAACTTGT GGGTCACAGG TGACGCCAGG ACTGCATCAT CCTGGTGCTC GGACTCCTAG 001600
001601 TGACAGCATC CTGAGCAGGC GGTAGCCCAG ACACCACCCT GCCTGATATG CCCACTGTTG GTGGAGACAT CACCCCAGCA 001680
001681 CAGACCTCAA TTAAGACGAC TACCCCTCCG Acgactcccc ctcccttcac tggaggtgac ttcacgcact tcttcagaac 001760
001761 ctcctcagca gcgatgccca tggactgggg ttcctaaggc acaaatttga tatttgagat tctgtgatga gctgagcttg 001840
001841 ctgtccgcta acccgtgatc ctggtgtaat ctcaaccaaa acccacagcc ctgcacccct tgcctgtagg aaaatctggt 001920
001921 aggagttagt agtgtctgtg aagtctcaat aattgatacc aaaatgtttt gtttcaccag gaggtgcccg cctcctatca 002000
002001 gcctctggga aggccactgt ctccccagtg ccttctcctc cgctgcagct ttccatctca tctcctTACT CCCTTGACTT 002080
002081 GGCTTCACAC AGAGCCTCTT CTTTACACAT ACTAACTGTT TGCTTCATAC CCTCCTGCAG CAGAACTACA GACCTGCCAT 002160
002161 CCTGATAATT GTCAAACTCA TCCCTTTATC ACCTTtataa ctcctcaagg atattatcat tggaccccca acatttcaaa 002240
002241 gtgattttct tgagtaatac catatgctgt gatgtggatg tgattggttt gccctcatca agtctcatgt tgagctttga 002320
002321 ccctcagtgt ggcagtgctg ggagggggcc tggtgggggt ttgggtcatg ggggcaccct cctgaatggt tggataccat 002400
002401 tcattcttgc tgtgtcaagc ctggattggt ttgtagggga atgcactagt tactgggagc atggttgtga taaagccaag 002480
002481 ccgtccctcg ggtttggctc actgcccttg accttctctg ccctgtttga cacagcaaat agtcctcacc agaagcaggt 002560
002561 cagatgccag tgctatgctt gcacagcctg ctgaaccatg agccaaataa gcctctttct aagttaccca cagcctcaga 002640
002641 tatgtagcaa cacagacaga ctaagacacc aagcatgatg gaaaactggg ttatgggcag gactgcaagt actggttagg 002720
002721 cagatacctg tatttctctt cctaactctc agaacgtgtt ctgtgtcact tagggcaact tatgccctcc tgtgtgaaaa 002800
002801 tctcc
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Predicted Small Protein

Name NONHSAT144495_smProtein_2306:2593
Length 96
Molecular weight 10030.2904
Aromaticity 0.115789473684
Instability index 47.6515789474
Isoelectric point 6.22161865234
Runs 11
Runs residual 0.0132615002072
Runs probability 0.0387660387661
Amino acid sequence MLSFDPQCGSAGRGPGGGLGHGGTLLNGWIPFILAVSSLDWFVGECTSYWEHGCDKAKPS
LGFGSLPLTFSALFDTANSPHQKQVRCQCYACTAC
Secondary structure LLLLLLLLLLLLLLLLLLLLLHHHHHLLLEEEEEEEELLLLLLLLLLLHHHLLLLLLLLL
LLLLLLLLEEELLLLLLLLLLLLEEEEEEEEEELL
PRMN -
PiMo -