NONHSAT143557

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT143557

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3500 nt

Genomic location

chr16-:72314108..72392089

Exon number

9

Exons

72314108..72314585,72317327..72317533,72325069..72325312,72355299..72355336,72368022..72368507,72371225..72371852,72380224..72380971,72391412..72391517,72391523..72392089

Genome context

Sequence
000001 TCCCAGCTGG TGAATAAAAT CTATCACGTT GACAAAACAG CGTGAGTGAA AATCTTTTAA ACATGCATCA GCTGCAGGAG 000080
000081 CTGAGTGTTG AGAAATACAA GATTAAGATG ATGCTGGAGA GAACTGAGGG GCACTCACGT TCACCCCTCT AGGAAAACCC 000160
000161 TGCCTGTGCT CTACTGAGTC ATACACCATT AGGGTGATAA GGCAAGCTCA GCTGCTAAAG ACATGTCTTT CCTATAATGT 000240
000241 ATATATCAAA AAAACATGGC AGAGACGTTA TGGCTCAGCT CCCTGAATCA AGTTATCTCT AAAATGAAGA TTAGATATTA 000320
000321 GTTTTATTAC TCTATTATTA GAGTTATAAC AAATCTAAGT GCTAAATTCC TTTGAATATA TTGTCCTTCA TACCAAGCTG 000400
000401 GCAATACCAT AAAGATAACA ACTGAGGTAG AATATTTAAC AAATATTTAT TGATCACCTA CTATGTGCGA AACTACAAAG 000480
000481 ATAAATCAGA CTTGGTCTTG GACTTGCAGG AGCAAAACTT CATGTTCCGT GAGGATAATA GGCATACATA AAAACACCCA 000560
000561 AGCTGAACAT GAAGAAGAAT GGAGGAGTAG AATTCTGTCA TGGTGTGTGT AGGGAGGAGG GTGAGGAAGA ATGAATAAAG 000640
000641 ATGACAGTTG GGAAAAGATA GTTTATATAA CAAGGGATAG TAGGCAGGTT GTGATTGGAA TCTTAATAAC CTGTCAAAAC 000720
000721 AGAGCATTTA AATCCTGTTC ATGTTATTTT ATATCCTTCC CATGGAACAC AGATAGCCAA GAAGACAAAT AAGAGAGGAC 000800
000801 CCTTGGTATT TTTTCCTTGT TTGTATGATC CTGAGGGTTT TGATGAACTG GCTTTTGCAA GTTACATTGT CGTTGTTCAA 000880
000881 GCCAGCTTCA GCTGATTGAT TTGGCAAGGA TCCAAGGCAT CGAAAATCAA AACAAAACAA AACGAAAAAG AAAATAAAAA 000960
000961 CTCAGATCAG ATCAGAATAC ATCATAACAA TGTAATCATT CAGCATCTCA TCTGGTTACT TATAATAAGT TGTGCAGTGA 001040
001041 TGAAATGGAA ATAATTTACT CTGGCCACTC TGTGTTACTG TTAAATCATT TATGTGCTGT GAAAAGAACT GCAAACTGTT 001120
001121 GAGACTCAAA GATCCCCTAA CTGCATTCTC CCAAGGAATT CTCCACCACG ATCCCCAGTT CTATTTCATA TTTTAAACAT 001200
001201 TTTCTTAGAG TGTGAGCTTT ATTATCCACA TTCAAATTCA GCAAGGCTTA CTCGTCCAGA TAGATCACCA TCAAGAAATA 001280
001281 CAGTAATGTG AAATTGAGCT ACTTCTGACA TTTTTATGGT TTGTGATATA CGATACAATG TGATGTATGA AGCTCTTTGT 001360
001361 AATAATTTTT AATTTTGAAA TAGCTGATTC TTTGGGGATC ATTTAATACA TAATTCCATA GGAAAGGAGT CTCCTGGTTT 001440
001441 GTCTTTTTGT GACTCCTCCC TGCTCTTGCT CCACTTCCCT GTTCTCTGGG CTGCCTTTAA AAGAAAATCT ACAAAGCAAA 001520
001521 TGTGAAAAGA TTTAGATAGA AATGAAAATT AAAGTTCTAT ATATTAAAAT TCATGCACTG TAACCACATG GTACTGAAGC 001600
001601 ATAAATGTAT ACCTTTAAAT ATATTTGTGA AGCATAAAAA AGATTGTAAA AAAGTAACTT AAGTGTTTGA CTCATGAAGC 001680
001681 TAGAACAGAA TAAATAAAAA AAAAAGTAGA AGGAAAGAAA TAATGGAGAA AAAAGCATAA ACTAATAAAA TTAAAAACAA 001760
001761 AGAAATAATA CAGAGGATCA ACAAGTCAAA AACCAGTCTT TGAAAAGAGT AAAAAAAAAA AAAAAGCATG TAGCCAGACA 001840
001841 AATTAAGAAC AGATATAAAA AACACAGATT AATAAAAATT AGGATTAAAA AATAGAACAG AGGTATAAAT CTGTAGAGAA 001920
001921 TTTTTCAATC ACTTATGAAT ATTATGAATA ATTGTATGCC AATATATTCA AAAACATTTA AAATGGACTT TTTAATTTTT 002000
002001 TTGAGACAGC GTCTCACTCG TTGCCCAGGC TGGAGCACAA TGGCGCATTA ATTTGATGTA CCAATTGGTA ATCCATATGA 002080
002081 AAATAAAATT AGTTTTCTAA CTCATATAAC CAAAAAAAAA AAAAAAATCC ACAGGTTAAA GACCCAGATA TGAGGGGTGG 002160
002161 AGTAAGCAAA AGCATTAAAC TCCATAAAGA AAATATACGA GAGTATGGTA AGAAGGAGCA TATTGACCAA AATGCCAAAA 002240
002241 GCACAAACCA GAAAAGAAAA TATTAATAAA CTTGTCTACA TTAAAACTTT TAAAATTTCC TATTCTACAA AAGACACCAC 002320
002321 AAACAAAATT CAAAGGTAAG AGATAGGTGA GGCAAGATAT CTATAACATA TACTATTGAT GTATAGTTAC AATATACACA 002400
002401 AAGAATTTGT AGCCACAATA TATCCAAGAT GCATTCAACT CTTTTTTTTT TTAATTATCT ACATGTGCAC ATTGTGCAGG 002480
002481 TTAGATACAT ATGTATACAT GTGTCATGCT GGTGCACTGC ATTCAACTCT TATTTCTGGG ATAAAGGGTT GTGAAGCTAA 002560
002561 TTGTCAATCC AATGTAATTG GTTAAGATAA GATCATACTG GATGTGGATG GGTCCTAGAT CTGACTGCTG ATATCCTTAT 002640
002641 AAGAAGAAGA AAGGACACGC GGAGACTACA GTGATGTTGC CACAAGCCAA GAAATGCCAA GAATTTCGGG AGCCACCAGA 002720
002721 AGATGGAAGA GGCAGGGAAA AATCCTCCCC TAAAGCCTTC AGAGAGAGCA TAGCTCTGCC AACACCTTGA TTCTGGACAT 002800
002801 CTAGCCTCTT AAACTTATTA CATCTGGGAG TACAACTTGA AGGGCCCCAC ACTCTTGTTT CTCAGCACCT CATAAATCTA 002880
002881 AGCCCACGTG AAGTGAACAG AGCATCCCTT CTTCAAGAGA ATGGAAAAAG AAAGGATGCT GAGGAGGAAC TGTTGGGGGC 002960
002961 AGAGCCCTTG AAGCCAGCTG GCAAGACTGA GACCACTGAT CAATGCTTTG CCCACTGAAA GGAAAGAAGC TGAAGCGTAG 003040
003041 CAGGAGCTTA ACTGATGAGA TCCATTTTCT CTTCCATCAA GCATCTTCTT GTGTATTGTC TTAATCCAAA TCCTTGACAG 003120
003121 AAATGCTGAA GAGGACCTCT GTAGGCTAGG TTGATCCTGA ATTCTCAAAT AGCACTGACT GGTACGCAGT TTAACCAAGT 003200
003201 CAGTTTCACC TAAAAGTGTG ATTATCCAAC CCACATGTTG CCATTCTGTT AAAAAGGATG GTACAAAAGA CAGTCACAGT 003280
003281 CACCTGGCTT ACTGACATAA ATATTAATAT TAATCCAATA AGTAAAAAGC ACATGAGAAT TGGCTGCCAC AGAAAGAAAA 003360
003361 ATTTCGACCT GTATCTACCA AGAAACTATC TTACCAACTA AAGAAGCCAA ATCTGTCTCT CTTTCAAAAC CCTCATGGGG 003440
003441 CCATGTTTTA TTATAATGGT TTGTCACAGG TCCTAACCCA TACTGTATTT GATTATATAC
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Predicted Small Protein

Name NONHSAT143557_smProtein_2378:2584
Length 69
Molecular weight 7794.1668
Aromaticity 0.147058823529
Instability index 44.9279411765
Isoelectric point 7.61016845703
Runs 10
Runs residual 0.00655802861685
Runs probability 0.0405493729023
Amino acid sequence MYSYNIHKEFVATIYPRCIQLFFFLIIYMCTLCRLDTYVYMCHAGALHSTLISGIKGCEA
NCQSNVIG
Secondary structure LLLLLHHHHHHHHHLHHHHHHHHHHHHHHHHHHLLLLEEEHHHLLHHHHHHHHLLLLLLL
LLLLLLLL
PRMN LLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHHHHHHHHHHLL
LLLLLLLL
PiMo iiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTooooTTTTTTTTTTTTTTTTTTii
iiiiiiii