NONHSAT142647

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT142647

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1516 nt

Genomic location

chr16+:56142935..56170588

Exon number

5

Exons

56142935..56144151,56145720..56145859,56158886..56158948,56166142..56166207,56170559..56170588

Genome context

Sequence
000001 GGAACAAAAG GAATTTTGTC TGAGATTTTA GCAGAAAAGT AATTTTTGAA ATCTATTCTT GGATTTAGAC GTTTATTGGA 000080
000081 TTTCAAAGCT TCTTGCTGCC CAGGAGCTTG TGAATACGGT CAAAGGTCCA TGAAATTTCC AAAGTGGTAC CACAGCAGAT 000160
000161 GAACCTGAAT GCAAACTGGA GGGACCAACA GAGTCCAGCC TATAGACATA AATCCTTAAC TACACCTAGA TCTCACTGTC 000240
000241 TTTTCCAATG GTCAAAAGAG GGGCTCTTGA AATGGCTCCA TTGTTTTATA GAAACAAGGT CTTCCTAAGA AGTCTTTTTC 000320
000321 TCCTATCTTT TTCTTACCCA AAATAAAGGA ATGGCCCAAA ACCTCAAGCC AAGCTTACCA GCTATAAACA ACTTGGTGGT 000400
000401 CAGCAGCCAA AAGAAGAGTG GACATGCCAT GGTCATGTGG CACGTACCCT ATACAAGCTT CACAGAGAAG AATGGAAGCA 000480
000481 CTTGATTGTA AGACAGAGGG TGAGATGTGA GAGGAATATT AACCTTCACT TTCCACAGGC ATTTTTTTCT GCAAATGGCA 000560
000561 CCAGCTTTTG GACTTAAAAT TTTATTCCAA ATACTATTTA GATGCATCAG GGCCCTCAAA ATATGGATTT CAAGTTGGAG 000640
000641 ACATCAAAGT GCATTATTTA CTAAAACCAC TGCAGCTTTT TTCCCCTCTC CTTTCACAAG ATGCTATTGT AAATTCAGGC 000720
000721 TGCTTTAATC TCTGTGATTA AAAAAAAAAA GGAAGAAAGA AAAAAAAAGT GCTGCTTGAA GAGGAACTGA ACTCACAATC 000800
000801 TGGGAGCTAG AAAGTAAATA TTACCCAGAG AGTACCTCAC TTTAATTACT GGCCTGAACA TTGGTTTCAA TTTACATGTA 000880
000881 TTTTAATTAG CCACAGAAGG GTTCACCTAT TACTCTCTGA ATACAAAACT TAAAAAGCAA ACAGAAAATA GGGAAAGAAA 000960
000961 GGCTTATTTA AGGGCCTCCA AGGATTAATC TTTGCATTCT TCTCATTTTT TCCCCGAATT TGGGGATAAA ATTTGTCGCA 001040
001041 GGGAATTTGA TCTTAGGGAA ACATTGAGTT TGGTTTGTGA ACACAAGCTA CTTCTGAACA CTATTTTAGC AAACAGAATT 001120
001121 TTAGAAGCAT AAGGCTCTAG CAGAGGGCTA TACAGAATTT TGCATAAACT AAATAACAAC CGTTTCCTCC TGAAATGCAG 001200
001201 GAAATCAAGC TGCACGGTCC TTAGGTCTTC AGCAAAGCTT GGACCACTTG GCAAAGTCTT CTGTCTCCAG AGGAATGATG 001280
001281 GGAAAACTAT Gggacaaaag tcaggagagt ggtgctggct gatcctggcc tggacattga ctccctgggg actttggTGC 001360
001361 TCTCTCGTGC TCTCTCTGTC TCCAGTGATA AGCTGACCAG ATGCCTTGAA TTAAGTACAG tatgcagcAA TGCCAGCCCT 001440
001441 GGACTTTTCC CCAACCTATC ACCCAACCCA CTTACCTGGA GCCAAGGGTC ACCAACATCT CTAATAGAAT CCAACT
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Predicted Small Protein

Name NONHSAT142647_smProtein_554:727
Length 58
Molecular weight 6744.1191
Aromaticity 0.19298245614
Instability index 51.8596491228
Isoelectric point 11.0150756836
Runs 5
Runs residual 0.0662280701754
Runs probability 0.0239357004063
Amino acid sequence MAPAFGLKILFQILFRCIRALKIWISSWRHQSALFTKTTAAFFPSPFTRCYCKFRLL
Secondary structure LLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLEEEEEEL
PRMN LLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLL
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