NONHSAT142374

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT142374

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3461 nt

Genomic location

chr16+:49376129..49383279

Exon number

2

Exons

49376129..49378260,49381951..49383279

Genome context

Sequence
000001 GCCGAAAGTA AAGAGGGCCA CAGTAGAGGA GGGAACAATG CCACACAACA TGAACAGCAA GGAGGGAGCA TTCCATTCTG 000080
000081 AGCAGAGGGA CGCGAGGAGG TGGGGCCTGA AAGGACACAG GAGGCACTGA CCCCCCGAGG CAAGGGAGAT GTGCCTTCTC 000160
000161 TGGGAGACAG CGGCTTGGGA TGGTGGTGGG GCAGGTTCCC CGGGGAAGAC CTGGACCAGG GGCTGGGGGT GGGAGTTGGA 000240
000241 GAGGAGAGTG CAGTCTTGGG AGCAGATTTA AAGTTAAGTG GCCTCCATGG ACCCCACATG GCCCAGTCAG TTTGGACCCT 000320
000321 CCTGGGAGAT CCTGAGTTCT GAGCCTAGGC GGTCTTGTCC TGCCTCTGCT GAGCACCCGG GCCATGGCAG CCATCAGGAT 000400
000401 GCAGGAAGGT GGGGTCCCCT CCCAGCAGCT GGGAAAGCAT GAAGGAAGTT CATTTCTCTG CAGCAGCTAT AGTGATCGTG 000480
000481 AGGAGAAGTA ACTGAAAAGG TCAGACACAC ACTTCACTTA CACAGCTCAT AAGTCAGTAA AGAAGCAAAG CCTGAGACTT 000560
000561 CCTCAGGAGG TGAGTAAATC CTCTGCCTTG CCAAGGCCTG CAAAGCTAGG CTTGGGGCCG GCCAGCCTAG GGGAGTGGCT 000640
000641 TCTCCTGCTC TAGCTCCCAG TGCCCTCTGG CTTGGCTTTC TGAAGAGAGG GCTAGAGGAG CTGTGCCTCT AGAGTTCAAA 000720
000721 AGAAAAGTAC CTTagggagg gagtataggg ttgcagtcaa aagaatgggc tctggactca taaaaacatc agttcaaatt 000800
000801 cagactcata ccacttattt gctgtgtgat tttgggccac tcacacaacc tctctgagct gtcgtttccc ctccatactg 000880
000881 tagggctgat aatagtaccc aaaccataag tcattgagag gattcaatga agatcataca agtaaaagag ttagatcaat 000960
000961 gcctagGTTC CCACTGCATA TTGGCTGTGG TTGTTATCTT TATCATTTAA ATCATTTATT ATTATTAACA CTTTAATTGT 001040
001041 Acagcctcca aaatgacccc tgtgatccct tccccctggt attcatgcct gctatttaac cagaataggg ttgatctgtg 001120
001121 tactaatagg agattgtggg gacagcagaa tgtgacttcc aaggctaggt cctgaaagat gctgtgactt tcgcctgagt 001200
001201 ctcttggatc actcgctctg ggggaggact gctgtcatgt catgaggaca ctcaggcatc cccatggaaa agtctgcatg 001280
001281 gtgagcaccc gagacctcct acccacagcc agcattaact tacctgctct gtgagtgagg cagcttggag gaagatcccc 001360
001361 ccaccccaga taacccctaa atgacagcag ctcccaccaa catcttctct ccaagctcat gagggagtgt gagtcagaac 001440
001441 cacctagcta agctcgtgaa ttcctgacct gcaaaaaccg tgcgagatca caaatgttca ttttttttat tgaagccatt 001520
001521 aagttttggg gtgatttgta atgcataaat aattaataca ATTATTATAC TGAAAATTTC TCACTAGGAA GTGGCCACTC 001600
001601 ATTAGGCAGC CCCAGCCTTC AGGCTCTGTC CAGCCCAGTA AAAGTCAGTC ATTTTTGTGC CAAAGATCCC TGAAAGAGAC 001680
001681 agcatcatgt ttgggtatca cctcctccag agagccttct tggccaagtc aagagctttt ctccatgtgc ccacagAAAG 001760
001761 GCTCTTTGTA ATCCTCTACC ACACTGCATT GTCATTCTGG Gaccaatcat gttttcatct aggctttggc tactaggagg 001840
001841 ctcagaccca aatttTCAGG CCACTGCGAA GACTCTCAAT TTATTCTTGC CCTAGTTTAC TCATCTATTT GCTTTGTCCT 001920
001921 GTTttgtgtg tcccttgtgt aaattatcac acatcctttg tgaaatgagg cggcatGAAG CAAGTCCTTG CTGAAGGTCC 002000
002001 AGGGCATGGC AAGAGAACCT GAGTTTAAGA AGCAGACATC ACCTGCTGGC AGCAGGCAGT ATCCTCTCAG TCAGCCTTGA 002080
002081 TGTCCCCTTC CCTGGATCCT CACTTCTCAT GGCAATCTCC CCGTCTCCTC AGGAAAAAAT CTACAACTTT CATCAAATTA 002160
002161 CTCAGGGAGA CTTTATTCTA AAGAGACTGA AAACGACCAA CATCAATTTT GACTCCTATG GGCATCTGTA AATAGCTTCA 002240
002241 AGGTTTTAAG GTGAAATGTC ATGTACCAAA ATACACATTC TGGAGAAGCA GGAAGCTACA GACCAACTTG AGATGAAAGT 002320
002321 CTCATATcaa tgttttccca agtgtgctcc ttggaataca ggttgacatg atatgatgcc cagcaaggga aacaaaacat 002400
002401 attcatgttc aaattagttg gggaaatgct ggactaaata aggtttgatg ggattctttt ttctgcagga cttctcagaA 002480
002481 GGGGCTAGAG TAGGCAAAGT TTCCCAGATT TACCTAATAA AAGCATTGTT TCTGTGGGAG TTTCATTTGT TATTACATGT 002560
002561 TTCCTGAATG CAGATTCATA GACTATCCTT TGGGGAACCC TCGTCCTCAC GGGATGTATG TTCATGGTGG TGTCTTCGAG 002640
002641 TTTGTGCCCT TGTGAAGCAT TCTGGCAGCA AGCATCTGAA CACTTCCAAA AGGGGGCGAT ATTTAGGAGA AATCGCTCAG 002720
002721 CCTGAGTTAG AACAAATGCA GCTGCTGGTG TCTCTTGGTG CCTGGGAGCC CTAGAGTGTc agagggagga gcgtgcacac 002800
002801 tggaaccagc agcctggtgc tgcgtctcag ctctgtcgct aactggctat gcacctctgg gcatggcact taacccttct 002880
002881 gagccccagc ccgccatctg taaaaagggc ttgatgtgag gattgaatga gatcatgcag ggaacacaat gtctggcact 002960
002961 tggaagcgtc caccataaaG AGCCAAGGCA GTAGATGGCC CAGCTGGGTT TGGTCCAGGC AGAGTTTACC CTCTGCCCTG 003040
003041 GAGGCTCCAG GAAATGCTGC CACGTGGCTC CTATTGCCTT AACCACATCC GACCTGTTCC TGACAGCTCC CCACATCTCC 003120
003121 AGCTCCTTTG CTGGTGCTCC AGGCACCTCC AAACGTGGCG AGCCCCTCTC CCCTGCCCTC TTGTGGCAGC TGACCTGGCA 003200
003201 GGAGTGGGAC CAAGACATCC AAGGCAGCTC CTTTCCACCT GCATGGGCAC TTTCCTCAGG ACATCCTTGC CCCTGGCACC 003280
003281 ACCTTGGGCC AGCAAGCCAC ATGGAAATGG ATGCAGAGGC ACCACTGTTT GCTGACAATT ATACACTGTC CTTAAGGTCA 003360
003361 CCCTTGGCGA TCTGTCACCA GGAGCAGACA AACCCACACC TCAACCATCC CATCAGAGCT TGTTTCTATC TGCATCTGTC 003440
003441 ATCGCTGATC GCATTTGAAT G
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Predicted Small Protein

Name NONHSAT142374_smProtein_3053:3334
Length 94
Molecular weight 10175.8829
Aromaticity 0.0537634408602
Instability index 53.1709677419
Isoelectric point 9.54766845703
Runs 11
Runs residual 0.0126443647949
Runs probability 0.042708483885
Amino acid sequence MLPRGSYCLNHIRPVPDSSPHLQLLCWCSRHLQTWRAPLPCPLVAADLAGVGPRHPRQLL
STCMGTFLRTSLPLAPPWASKPHGNGCRGTTVC
Secondary structure LLLLLLEELLLLLLLLLLLHHHHHHHHHHHHHHHLLLLLLLLLLHHHHHLLLLLLHHHHH
HHHHHHHHHLLLLLLLLLLLLLLLLLLLLLEEL
PRMN -
PiMo -