NONHSAT141926
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT141926 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1223 nt |
Genomic location |
chr16+:31519708..31520930 |
Exon number |
1 |
Exons |
31519708..31520930 |
Genome context |
|
Sequence |
000001 ATCCCAGCCC CGCCCCTGCC GCACGGTGGA CGTGGCAGGC GGCACTTCCG GCTGGGCTAC CGCGGCTGCA GAGGGACATC 000080
000081 TTTCAAGAAC AGGCGCCGGC CTCGGCGTCC GCCGCGCAGT TAGGAAACTG ACTGTCGCTC TCTCCGGCCT CGGCGCTGCT 000160 000161 TCGGACGCCC CGGCACCGGC CCCCGTTGCT TTGTAGCATT CTGCAGCTGG GCTGCAGGCG CCGTGGGCCT CCGCCAGTtg 000240 000241 tgttcgagac gcggttcggc cacagaagtt ttagcttgtg acttttggca agtcagtggc cctctctggg cctcaggtgc 000320 000321 cttttttgCT Gtgagaccag cgactgtatt tttaaccctg attttatccc tagatctacc caacacatag taggtgctca 000400 000401 aaagatattt atgagtgaat gaatGCATCA TGAGAAGAAA TTGGACCAGA TGAGGCCCTG TGAAGCTGCT TGGGTCTTTT 000480 000481 TTTGTTCTTT TTTTTTTCTC TCTTCTGAGT GTCCCTGGCC TGGACTAGAA ATTCTCCATC CTTCGGCCTT CTGCGAGACT 000560 000561 GCAGGAACAT TACTTTTGAA GGATGCTAAG GAATCCGAGG GATGAAAAAA ATCAAGAGAT TGCAATGATG TCACAAAACA 000640 000641 AGGAAACAAG GCAGGAAGTT CTTGTGTGTT TTTTTGCGGG AGAGAGTCCA TGAAATTGGG GGGAGTCCAA AGAGGGAGTG 000720 000721 TTTCTGTCCT TGGAACTCAC CTTTTCTTCT TTCCATTTCT CCTCTTCTCC TTCCCATCTA GTGCAGCATC TTCACTCCGA 000800 000801 AGCAGAAATT TGCCAAAAAA GCATCCTCTT TTTATCAGAA AATAAAATAT CCTGGTTTCT TAGCCTGGCA TTCTTGGATC 000880 000881 CCCACAGTTT GATCCCAACC GACAACTCCT TATTTGAAAC TTCAGATTCT CCCAAACCGT CACCTTCCTC GTGGACTTAA 000960 000961 TCCTGGAAGG CCCTTCTACC CCACTTCGCC TTATCTCACA CAAACACAGT CTCTCTCTGA CTGAGATAAA CTTGAACACt 001040 001041 tcttttcttt tctttttttt tttcttTAAA TTTCGGGTTT CAAAATACAA ATGGCCTAAT CACAACATTT CTGTAATGTT 001120 001121 GTCTAAATTC AGGTACTGGT TTGAATAGAG GACAAAAATA AAACAAGGTT TGAAGACTAA GTACTTTAAA AACAtattta 001200 001201 tttaaataga ggcagggcct ccc |
Predicted Small Protein
Name | NONHSAT141926_smProtein_422:604 |
Length | 61 |
Molecular weight | 6847.8266 |
Aromaticity | 0.133333333333 |
Instability index | 46.46 |
Isoelectric point | 5.13104248047 |
Runs | 9 |
Runs residual | 0.000265957446809 |
Runs probability | 0.0400891087166 |
Amino acid sequence | MHHEKKLDQMRPCEAAWVFFCSFFFLSSECPWPGLEILHPSAFCETAGTLLLKDAKESEG |
Secondary structure | LLHHHHHLLLLHHHHHHHHHHHHHLLLLLLLLLLLEELLLLHHHHHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |