NONHSAT140956

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT140956

Source

NONCODE4.0

Same with

,

Classification

sense

Length

516 nt

Genomic location

chr16+:20836884..20838508

Exon number

2

Exons

20836884..20837270,20838380..20838508

Genome context

Sequence
000001 acacactcca taaatggtag atacaattat tAATATTATT TGCATTCATC TTCTTTGTGC AGACTACACT GTGTTGATCC 000080
000081 TCTTAAGTGT AACATTCAGC AGCCTGCCCA GCTTTAATTT CACTCACACT AGATCCTCTA GAAAGCAAGT TTGTGCCATT 000160
000161 GCTGCAGGGA CCCTGGTAGA TTACAGTAGA TGGCAGTTGA CATAGTGTAA ATAGTAAGAA GAAGCAATAA CTTCCACAGT 000240
000241 TCAGCAGCCT GACTACATGT TGGTCTTTCA GTGCCTCACA TCCAAGGGGA GAGAGCTAAC ACGCATCTCA CTGGTTGCTG 000320
000321 AAGGAGGCTG CTGTGTTATG GATGAACTGG TCAAACCTGA AAACAAGATT CTGGACTACC TCACCAGCTT TTCGGGAATC 000400
000401 ACGAAGAAGA TTCTTAACCC AGTGACGACC AAACTCAAAG ATGTACAGAG GCAGTTAAAA GCACTGCTTC CTCCTGATGC 000480
000481 TGTGTTAGTG GGCCACTCCT TAGATTTGGA TCTCAG
[back to top]

Predicted Small Protein

Name NONHSAT140956_smProtein_341:424
Length 28
Molecular weight 3417.8575
Aromaticity 0.185185185185
Instability index 74.3888888889
Isoelectric point 12.178527832
Runs 5
Runs residual 0.0214707461084
Runs probability 0.0457516339869
Amino acid sequence MNWSNLKTRFWTTSPAFRESRRRFLTQ
Secondary structure LLLLLLLLLEELLLHHHHHHHHHHLLL
PRMN -
PiMo -