NONHSAT140667

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT140667

Source

NONCODE4.0

Same with

,

Classification

sense

Length

4351 nt

Genomic location

chr16+:14165179..14238642

Exon number

3

Exons

14165179..14165222,14173147..14173211,14234401..14238642

Genome context

Sequence
000001 ATCGCgcggc ggcggcggga gcggcggcgg cggcggccgg ggagGTTCAC AATAAAGGTG CTAAGAAAGA GAATGTAAGA 000080
000081 CAGGAAAATA ATTAAATATT CTTACCGAGT GTCTTCAATA GGCCGTGTTT AAGAGGCGTC TTACACTCCC TGTTGCCAGT 000160
000161 GGCTGGAACA CAATGGATCA CACAGGGGCG ATAGACACCG AGGATGAAGT GGGACCTTTA GCCCATCTTG CTCCAAGTCC 000240
000241 TCAGAGTGAA GCTGTGGCTC ATGAATTCCA GGAACTCTCC TTGCAGTCCA GTCAAAACTT ACCCCCTCTG AACGAAAGGA 000320
000321 AAAATGGTGA GTTCAGCATG TGCAATGGGA TCTTTGATTT AAAGATTTCC CCTCTTTGGG AGCCCAGTTT ATTCCTGTTT 000400
000401 GGTAGTAATA TTTTGGTCAG TTCAGCAGTC TGTCATGGAG GAGAACCCTG TAGAGGTACT GGATGGTTTT TAATAACAGG 000480
000481 CAGAATTTCA CTTTCCATTC AGTTCTTTCA TTATTTTCCC AGTAAGTATC TTTGGTAGTG ACGTTACCTT TGGAAATAAT 000560
000561 CTTTAGATTC AGCCATTTTA GCACAAGCAG ATGATTTCAT GCTGGAATGG CATTGGAAAG TAGGTTCCTG TGCTGATGCC 000640
000641 GGGGAAGTAC ATTGTGGATA TGACTGCATT CTCCTCCCAC TTTCTCCATC TCCGGTGTGT TGCACCGTAA TTTCACAAGT 000720
000721 GGCAAAGCTA TCTCAGTGAT GACTAAGAAG TCAGGAGCTT CTTATTTGAG TATTTATTAT ATTAATGGGT ATTGGATATA 000800
000801 GTCATATTCT CAGTCTTTGG CTGCCTCATC TTTGTCTACA AAATGAATAT TTTCTATTCA TTATCTGTTC AGGAAATTTT 000880
000881 CATCGCTCAC AGAGATATTC CAGAGTCTCC AGAAGACACA ATACTGTCAA TTTTTAACAT AAACAAATAG AGATAGATGA 000960
000961 CATATACTTT TAATACTTAA GATACAAAAT CTAACAAAGT AATGTTAAAA TTTGCAAACA CTCTAAGCAT GCACATTAAA 001040
001041 AAATAGAATT AAGGTTTTTT TCTGGAATTA CTATACCTTC CACAGTTCTG ATGAGTCCCA CACTCACAAG TATATTTGTA 001120
001121 AATTTCAGTT TTTTAAAAGC CAGAAGAAAT AAAACTGCTT TCCCTGCAGA GTGCCTCATT ATGTACCTTG TCACTTACTT 001200
001201 TCCTGGGTCC TGAGTGTTTT CCAGTCCTCC TACTTATTAG ACTTACCTTA TTTAGGAAAG TGGATTAAAA AAACCATACA 001280
001281 TATACCGTTC TTCTTAGGCC TTTAGTACAT GTCTTTGGTA TGTACTTGTT CTCCTTCAAA TAAAATGTGT TTTGCTTTGT 001360
001361 ATCTGAATCT TGTTGCTAGG CACAGCCCTT GACCATTTTG ATAGGTGttt tttttttttt ttgagacaga gtctcactct 001440
001441 gtcgcccagg cttgagtgca gtggcgtgat ctctggtcac tgcaatctcc gtctcttagg ttcaagtgat tctcctgcct 001520
001521 cagcctcctg agtagctggg attacaggca cgcaccacta tgcccagcta attttttgta tttttagtag agatggggtt 001600
001601 ttcaccatgt tggtcaggct ggtctcgaat ttctgacctt gtgatccacc cgcctcgacc tcccaaagtg ctgggattac 001680
001681 aggcctgagt cacagcaccc ggccAATTTT GATAGGTTTA AAGCAGCATC TTAGCTTAGG TGCTGTGAAA CCTTCAGGAT 001760
001761 GCTGTGGTTA ACTCACTGGT GATGACTTTT AAACCTTCCA TCttttcttt cttttttttt tttttttttt gagacggagt 001840
001841 ctcactctgt cgcccaggct ggagtgcagt ggcgcgatct cagctcactg caggctctgc ctcctgggct cacgccattc 001920
001921 tcctgcctca gcctcccaag tagctgggac tacaggcgtc caccaccacg cccagctaat tttttctagt tttagtagag 002000
002001 agacggggtt tcacagtgtt agccagaatg gttttgatct cctgacctcg tgatccacct acgtcggcct cccaaagtgc 002080
002081 tcggattgca ggcgtgagcc accacgccca gGTTAAACCT TCCATCTTTT AAGAACCCAC ATTTACCTTA GACAGTAGCT 002160
002161 GAGAGAATAT AGCCATATTT ACTGAAACAT GACTAAGTGT GATCAGATTT ACACAGTACA CTTGGACCAG TATAATGTCC 002240
002241 AAATTATTAC CCTAAAAGAA AATAAGAGTT GAACTGTTAT AAAATCAGAA CACACAGTTG TGCACAATAA TGGTCTTCTG 002320
002321 TAATGGGGAG GGAAGAGTGA GGAGACTTTA TCCTTTATGG TCATTTACAG GAAAAGTTAA TATGTATGCC AGAATATAAG 002400
002401 GTGGCAAGCC CAAATATAAA GCAGTCTCCC CTtataaact tctaaggaaa tagattaaat ggtaaaattt taaatttatt 002480
002481 aatgtagtta cattttatga agcattgcaa taatgtagaa ggattgcttt aaccactctc attgttcata aaaccatcct 002560
002561 actcaaagtc tatatgtgaa tctttgtggt cagtgttttt atcagtagta gaacccctgt gcatcatcca tctagcacta 002640
002641 atttccaggg tacatcttca tttctgtctc tttggtttga gttacagcag ctttgtaaca tgtgcatgat ttggcactga 002720
002721 acatttCTTT TTTTTTTTTT TTTttcatta ggcaaacatt tattaagcac ttaatatgta caagggacaa gggagacGCA 002800
002801 TTTTTTAATG TTGTCTTTCT TTAGTAACAG TCAAAATACC ACACAGAAAA TAACTTAAAA CTTAACCACA GTGTTATTAT 002880
002881 TGACCAATTG GGTTTAATAC GTTTTCTTCA AAAGATGTTT GATATTTTGT AGGAGACAAA ATAATTATTT AGCTTATGAG 002960
002961 AAGATAGGGC ATAATTTTGG AAATCCAGGC CTCTGAAGGA TGGAGGTGCA TGTTTTAGAC ACAAATAATC TTCCCGGTAT 003040
003041 CTTTGAATAA ATCCCATATT TGGTAGTACT GATTCTtttt tttttttttt ttatacttta agttttaggg tacatgtaca 003120
003121 caacgtgcag gttagttaca tatgtataca tgcgccatgt tggtgtgctg cacccagtaa ctcgtcattt aacattagat 003200
003201 atatctccaa atgctatccc tccccccggc actgaaaatt tcatgtctaa atcacaagta ccattcacaa aacagttttt 003280
003281 ttttttaaat tgtcttagtt gtatactcat aatctctata acataatact tGTTTGATTT GTCATTGGTT GTTACATTTT 003360
003361 ATGGGGTCTA GTTTCTGTTT TAGAATTTGG CTTTTTTTAA GCAGATAATG TATTCATGTG GTTTAAAATG TTATGATTAC 003440
003441 CTAGTGAAAA GGAGGTTACC CTCCCAATCT TGTCCCTTAC CTGCACAGTT ACTTTCCCAG AATTAACTGT TACTAGTGTT 003520
003521 CTTTCTGAGA GAATAATATT TGACTACGTT TTAAaaagca gtttttaaaa ggctactttg taacgacacc caacactttg 003600
003601 cattttaagg ttctaactgg gaataatgta ttggtttttt tctcttttcc ttcttttttc taattctgat taaaatattt 003680
003681 ctgtaagcct gaaagtagct tcaaaagaag ttggttttta agccaatgtg ttttcttcaa gagtcctttt ttgttcaata 003760
003761 cggagtaaat gaaagaacat ctcattctga gaaactgtgc aaagactcca ctatgagatt gttccctctt ttctaataaa 003840
003841 tgacttcagg aagttattat agaagcctta ttttatattc agacatataA TTTCAGGCTT ATGATATATT AACCTAATTT 003920
003921 GCATATACAT TCCAAGGCAT AAAAGGCATC CTTATTTGGC TGTCAGAAAT CTAGGTTTtt ggggaaatgc tgctcaaagg 004000
004001 atacaaattt cagttagata ggaggaataa gtttaagaga tctattgcaa aacatggtag ccaaggttaa taacaatgta 004080
004081 ttgtattgaa aattgctaag atagtagatt ttaagtgttg tcaccacgaa aaaaatagta aacatttgaa ataatgatgt 004160
004161 gttaattcaa ttgagcaatt ccacagtgca tacatatttc aaaaaaaagt acatgataaa tatatataat ttttgccggg 004240
004241 cgcagtggct caagcctgta atcccagcac tttgggaggc cgaggcaggc agatcacaag gtcaggagat cgagaccatc 004320
004321 ctggctaaca cggtgaaacc ccgtctctac t
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Predicted Small Protein

Name NONHSAT140667_smProtein_3113:3325
Length 71
Molecular weight 8003.432
Aromaticity 0.114285714286
Instability index 56.6171428571
Isoelectric point 9.02020263672
Runs 10
Runs residual 0.0019801980198
Runs probability 0.0333333333334
Amino acid sequence MYTTCRLVTYVYMRHVGVLHPVTRHLTLDISPNAIPPPGTENFMSKSQVPFTKQFFFLNC
LSCILIISIT
Secondary structure LLEEEEEEEEEEEEEEEEELLLLEEEEELLLLLLLLLLLLLLLLLLLLLLLHHHHEEELL
LLLEEEEEEL
PRMN -
PiMo -