NONHSAT140577
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT140577 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
928 nt |
Genomic location |
chr16+:11559116..11582723 |
Exon number |
7 |
Exons |
11559116..11559388,11564471..11564579,11565134..11565303,11565314..11565342,11565350..11565480,11581186..11581242,11582565..11582723 |
Genome context |
|
Sequence |
000001 GGGACTACAG GCATGCGCCA CCACACCCAG CTAATTTTTG TATTTTTAAC AGAGACAGGG TTTCACCATC TTGGCCAGGC 000080
000081 TGGTCCCAAA TTCCTCACCT CAAGTGATCC TCCCGCCTCA GCCTCCCAAC ATTTGTATAC TTTTTGAAGT CACACATCTT 000160 000161 CCTGAAAAGT GGATAGAAGT TTTCAACCTT CTTCGCAGGA TGGAGGGCAG ACACAGAACT TCAACACAGT GACAGGGGCT 000240 000241 TCAAACGACT AAGTTCCGTC CAGGTACCCT TGGAGATGTG TGCTGCTGCG TGGAAGATGA CTGAGCATGA GACACGCAGT 000320 000321 GCCCGACCGC GTGGAGCCTA CGTCCTAGAG AGGAGGCACA GGAACACCAG ACACGAGAAC GGGAACTGAG TCACCAGCGG 000400 000401 GGAAGACAGA CCTTATCCAA GTAGCTTCAC TAAGAAACAG AACTGATTAA AAGGGAAGAA ATGTGGTTGT CTTACGGCAA 000480 000481 GTCACAAAAG AATATGATGT GCTCTGGGGT AACCAAGGCA GGCTTCCCTG AGGAAGTGAC CCCTGAACTG AGTGATTCAG 000560 000561 AGTTAATGCA TCATACAGCC CAGAATCAGC ATGTGCAAAC GTCCAGAAGA AACCTACAGC AAGACCAGCA CAGCCCAACA 000640 000641 GCCCCAGAGA GGAGCCCCAC GTCCTTTAGG GTGAGCCCAG GGCTGACCTA AGGAGATCCA CAACATGGCT GAAGGAGGCA 000720 000721 GGAGAGAAGA GAAGGGTCCC CTCCAGGTTG GCTCCCAGGC TGCCAGACAC TGATCGGAAG GTGACATCAG AATAGGACGA 000800 000801 GTGTTTCCAC ATTTCTGGGT GGAACTCCTG GCTGAGGATG TCCTCGGGGA GGGTGTCCCG GAGGGCCCGT TTCAGGGGGT 000880 000881 CGTGCGTCTC CAGCAGCTGC AGGATGTGAC TCCACACAAA AGAACCCA |
Predicted Small Protein
Name | NONHSAT140577_smProtein_275:388 |
Length | 38 |
Molecular weight | 4393.8721 |
Aromaticity | 0.0540540540541 |
Instability index | 51.9594594595 |
Isoelectric point | 10.7129516602 |
Runs | 8 |
Runs residual | 0.03644929333 |
Runs probability | 0.0428811164105 |
Amino acid sequence | MCAAAWKMTEHETRSARPRGAYVLERRHRNTRHENGN |
Secondary structure | LLHHHHHHLHHHLLLLLLLLLEEHHHHHHLLLLLLLL |
PRMN | - |
PiMo | - |