NONHSAT139652

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT139652

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

984 nt

Genomic location

chrY-:23382992..23383975

Exon number

1

Exons

23382992..23383975

Genome context

Sequence
000001 GAAAAGCACC TGGATAGCCT GATGGGCAAA ATTGCCTTTC TGAAGAAATT TCACTAAGAG GAGATCCATC CACTTGCAGG 000080
000081 GGCAGATCCA GTATGTGCAG ATCTCCATAG AGATAAACAT GTTCACCAAT CTCAACCTCA CCTCTTTGCT GGAGGTCATC 000160
000161 TGCCCACAGT AGGGAAAGAT GGCTGCCAAG AGCATGCAGA GCATGCAGAG GAGTGCTTTA AGAGCCCTTT AGACTGCTGA 000240
000241 GCCAGAGCAC TGTCAAGAGG GTCTATGCCA TGCAAGGCAC CAGAAACAAG GTGTCTCAGA GCCACTACCT GCTCAAGACC 000320
000321 AAGAACTTGG AGATCAAAGC ATGCTAGGGC ATGAAGGAAG TAATGGAGAT ATAGCTGCAG GAGCCAAAGG ACAAGTTGAA 000400
000401 CACCTACATC AGTAGTGTGC AGGCCATCAT CCACAAATTA GAAAATGAAT TGAAGATGGC AAAGTTAAAC ATCTGGATAC 000480
000481 CTAAATGAAT ACCAAGTCCT CCAGGTGAAG ATGGCTCTTT GTATTGAGGC TGCAGCTCAG AGGAAACCCT TCAAAGGCAA 000560
000561 GGAGACCCAG CTGAGTTTCA GCAGCATGGG AAGCACACTG CTTCCAGACC CCCTGGTCTT TGGTTTATCA CCTACTGGGG 000640
000641 TTCACATACC AACTCCTACA TGATGTCCAC CCACTCCTTC CTGTCCTACT ACAGTAGCCA TGTGCAAGAG GAGTAGATCA 000720
000721 TGGTGGAGGA ATCCATTGAG AGTGCTAAGA TTGAGGAAGG CAAAGACTAG TACCCCTCTG AAGAAAAAGC CTaggaggag 000800
000801 aaagataata aagaggagga ggaagaggtg gcagggaaga ggactaagct gctaaggaag tgtctaaaga agcaaaggat 000880
000881 aaagaagaaa taggtcaggg tgaagaagga gaggaaaagc tgaagaggag gaaaataaag ttgaaggtgc tggggaagaa 000960
000961 caagcaggta agaagaaATA TTAA
[back to top]

Predicted Small Protein

Name NONHSAT139652_smProtein_269:346
Length 26
Molecular weight 2891.3722
Aromaticity 0.04
Instability index 75.544
Isoelectric point 9.86492919922
Runs 6
Runs residual 0.0316981132075
Runs probability 0.0338426661955
Amino acid sequence MQGTRNKVSQSHYLLKTKNLEIKAC
Secondary structure LLLLLLLLLHHHHEEELLLEEEELL
PRMN -
PiMo -