NONHSAT138842
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT138842 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
917 nt |
Genomic location |
chrX+:142520836..142521752 |
Exon number |
1 |
Exons |
142520836..142521752 |
Genome context |
|
Sequence |
000001 ATGTTTGTAA TCAACCTTCT TCTACTTATT ATCCCTGCCA TCCTCACAAT AGCATTCTTA ACATTGATTG AAGTAAAAAT 000080
000081 TTTAGGTTAC ATACAACTTC GTAAAGATCC CAACATTGTA GGCCCATTTG GCCTACTCCA ACCCTTTGCA GATGCAATTA 000160 000161 AACTGTTCAT TAAAGAACCA TTACAACAAC TAACATCATC TATTCCCCTT TACATTATTG CTCCAACCCT TGTGCTCATC 000240 000241 ATATAGATCC GCCTCCCCAT ACCTTACCCC TTGGTTAATG TAAATATAGG AGTATTATTC ATCTTGGCCA CATCAAGCCT 000320 000321 AGTCGTCTAC TCAATCCTAT CATCAGAATG AGCATCCAAT TCAAAATATG CCTTGATCGG CACATTGCAA GCTGTAGCGC 000400 000401 AAACAATTTT ATACGAAGTT ACCCTGGCCA TTACTATAAG TCCTTTTGCA GAGTAGGTAT TTCACCTGGT CAACTCTTAT 000480 000481 TATTACACTA GAGTTTGTCA TGATCCCTGT CCATGACTAA TCTCAACCCT AGCAGAAACC AATGAAGTCC ATTTGATTTA 000560 000561 ACAGAAGGTG AATGAAAGCT AGTCTCAGGC TTAACATCGA ATACACTACA GGCCCATTTC CTGTATTCTT CATAGCAGAA 000640 000641 TATACTAATA TTATTATAAT AAACACCCTA ACCACTATCA TTTTTCTAGG AGCATTACAT GATATCTTCA TACCAGAATT 000720 000721 ATATACAATT AGTTTCATTA CTAAAACTGT TCTATTAACA ACCCTCTTCC TATGAATTCA AGCATCATAC CTATGATTCC 000800 000801 AATATGACCA ACTTATACAA CTCTTAATGA AAAAGATTTC TATCTCTTAC ACTAGCGTTA TGCGTATGAC ACCTTTCAGT 000880 000881 GCCCATCGTA ATATCTAGTA TCCTGCCACA AACATAA |
Predicted Small Protein
Name | NONHSAT138842_smProtein_347:490 |
Length | 48 |
Molecular weight | 5386.2625 |
Aromaticity | 0.127659574468 |
Instability index | 61.8914893617 |
Isoelectric point | 9.35333251953 |
Runs | 10 |
Runs residual | 0.0464893617021 |
Runs probability | 0.0278396043103 |
Amino acid sequence | MSIQFKICLDRHIASCSANNFIRSYPGHYYKSFCRVGISPGQLLLLH |
Secondary structure | LLEEEEEHHHHHHHHHHHHHHHHHLLLLEELLLEEEELLLLLEEELL |
PRMN | - |
PiMo | - |