NONHSAT138097

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT138097

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

666 nt

Genomic location

chrX+:105221996..105222710

Exon number

2

Exons

105221996..105222234,105222284..105222710

Genome context

Sequence
000001 taagacagct cgggcacaga gagaagtaag gggaaagtct cttgccaaac ttcactctca tacaatgggc cccagtaaaa 000080
000081 cagtgggccg ggccttaata agcacattca tttcccttca cgtgcagata gggaagctca agcagactca ggggatatgc 000160
000161 ctgcagctgc agaaagatgt atgggaacaa acacacaact ctctctctca gataagcatt acaaagagac acagaagcag 000240
000241 tctgtaagag agcgtggctc tgacctaact ttaccagcag cccctctcag gtttgtttaa aataaacctg tccctgttga 000320
000321 ctgtaaagcc acccttcatg tttcactcct ctttttttaa ttcttacatc aggcttgtag tatattttaa agttgggtag 000400
000401 catgatgcct ccagctctgt tttttactgc ttgggattgc cttggctact caagctttat ttttttggtt ccatgtgaat 000480
000481 tttaaaatat tttttgtagt tctatgatga acatcatttt tagtttcata ggaacagcat tgaatctaca aattgctttg 000560
000561 gacagtatgg ccattctatt tatattgatt cttcctatac atgagcatgg aatgtttttc catttgtttg tgtcacctct 000640
000641 gatttctttt agcaTTTTTC TTTTAG
[back to top]

Predicted Small Protein

Name NONHSAT138097_smProtein_401:484
Length 28
Molecular weight 3133.7192
Aromaticity 0.259259259259
Instability index 54.5666666667
Isoelectric point 3.66571044922
Runs 5
Runs residual 0.0214707461084
Runs probability 0.0462462462463
Amino acid sequence MMPPALFFTAWDCLGYSSFIFLVPCEF
Secondary structure LLLHHHHHHHHHHLLLLLEEEEEELLL
PRMN LLLLLHHHHHHHHHHHHHHHHHHLLLL
PiMo oooooTTTTTTTTTTTTTTTTTTiiii