NONHSAT138062
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT138062 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1033 nt |
Genomic location |
chrX-:103031504..103087187 |
Exon number |
9 |
Exons |
103031504..103031581,103046182..103046328,103047610..103047667,103048815..103048927,103049030..103049202,103049753..103049856,103050844..103050915,103081935..103082008,103086990..103087187 |
Genome context |
|
Sequence |
000001 GAGACGCTGC GCGGCGGCAG CGGCGGGCGC GAGCGGCAGC TGTCAGGCCA CCGAGGTCCA AGCCGCACTT GCTGCCCCAT 000080
000081 TGAGGACGAG GAGGCAGCAG GAGCAGTGAC GGTGACTCTA AGGAGCCGGA TTCCTGGCAC GCAGAGCTGA CCTGCCTGGC 000160 000161 ACCCGCGGCC CTCTCCTGTT TCCTTCCCAT TGTGTTGGCA CCCTAAAAAG AAAGAATAAA ACAACAACAG GAAAAAAAGG 000240 000241 AAAATATTTA AATTGTGACA AAAACCCACT GGATAAGCCA GCTGCAGAAT ATATCCTGAG GTACCTGCTT TATGGAATTA 000320 000321 TTCACACTAT TCACCAACAG GAAGAATAAA GTCAATCAAT TCAAGGAGTC TCAGAACAGG AGCACATAGA CACCAAACTT 000400 000401 TGTGGGACAA CAAATATAAT GAAGAGTATG TTTGCGTCTT TCAAACAAAG CCACGTGAAG TCAAGGCCCT TAACACCCAC 000480 000481 CCCTCCCACA TACTGAGGGG AGAATTCAGA TGCCCACTGG AGTCAGCCGA TCAGACTGCC TTTTGCACAC TCCTTGCCTC 000560 000561 CACTCCAGTT TACCGTGGAA GACCTGTCTG CTATGGCTGA ATCTGAGAGA GATCCTTGAG TAACGAATTA AGGAATGAAC 000640 000641 AAATGTTGCT CTGGACAAAG CTGCAGCTTC CACGTCCTGC ATAACTGCAC TCAGTACTGA CCCTGAAGAT AGGAAAAGCA 000720 000721 ATACAACTGG TGCTAGAAAT GTTATGAGAA TGACTTGGAT GAGCTGAAAA ATGAATGATC TCCTTGAACA AGCTCCTTGG 000800 000801 AAACCACAGG GTTGTCATGG TAGCTGTTAT CAAGGAGAAG GGAGTGAGAA GATGCTGACA ACACCCTGTT TCTCTTCCCT 000880 000881 AACGAGGTGT AAGGCCAGAT GCCCCCTTCG TCTACACAGA TTCTACGCTC CCTTATGCTG CTTGCCTGGA ATTTCGCTTT 000960 000961 GCTGCAGAGA CATCTGGAAA TGTGGATTGA GGGTGGAAAT AAAATGAAGA TGTCCTGAAA AAAAAAAAAA AAA |
Predicted Small Protein
Name | NONHSAT138062_smProtein_770:1006 |
Length | 79 |
Molecular weight | 8849.4361 |
Aromaticity | 0.0769230769231 |
Instability index | 52.4808974359 |
Isoelectric point | 8.75738525391 |
Runs | 10 |
Runs residual | 0.00547217010632 |
Runs probability | 0.0316993464053 |
Amino acid sequence | MNDLLEQAPWKPQGCHGSCYQGEGSEKMLTTPCFSSLTRCKARCPLRLHRFYAPLCCLPG ISLCCRDIWKCGLRVEIK |
Secondary structure | LLHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHLLLLLLLLLL LLEEEHHHHHLLLEEEEL |
PRMN | - |
PiMo | - |