NONHSAT137745

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT137745

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

538 nt

Genomic location

chrX+:82253707..82254244

Exon number

1

Exons

82253707..82254244

Genome context

Sequence
000001 ATGGAGTCAG TTTAATCGAA CTATGAAAAC CAGATTACTT CTTTCACTGA ATACCTCGAA GAATATTTAG ATACAGATGA 000080
000081 GCTGGTATGG ATCTTAGAAA AGCAGCATCT TATTAAAACA GAAACATCTA AGCTCTTGTC TGATATAAGT GTTTGTCTAT 000160
000161 AGTTTACATA CAGAAGGAAA TTTTCACCAA TTTGGGGAAC GGGCCCTTCA TCAGATGCTG GTTGGGGATG TATGCTATGC 000240
000241 TGTGGACAGA TGATGCTGGC TCAAGCCCTT ATATGTAGAC ACTTGGGAAA GGACTGTTAT TGGGAGataa caaaaagaac 000320
000321 aacaacaaca acaataaAAT ACCAATGGAT CCTACAGTGC TTCTTAGAGA GAAAAAATTG TTGCTACACT ATCCATCAAA 000400
000401 TGGCACAAAT GCATCAAATG GCACAAACAT CCATTGCACT GGCCTCGCCT TGTACCTCCA GCCAAGCCAG AAGTGACAAC 000480
000481 CACTGGGGCA TAATTCATTG ACTCTACTGA ACAACTGGAG GAGTTTGATC TGGAGGAA
[back to top]

Predicted Small Protein

Name NONHSAT137745_smProtein_344:475
Length 44
Molecular weight 4738.4042
Aromaticity 0.046511627907
Instability index 51.623255814
Isoelectric point 9.03546142578
Runs 7
Runs residual 0.0054873268879
Runs probability 0.0428243369421
Amino acid sequence MDPTVLLREKKLLLHYPSNGTNASNGTNIHCTGLALYLQPSQK
Secondary structure LLLHHHHHHHHHHHLLLLLLLLLLLLLLEEHHHHEEEELLLLL
PRMN -
PiMo -