NONHSAT137610
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT137610 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
3148 nt |
Genomic location |
chrX-:73429811..73433495 |
Exon number |
1 |
Exons |
73429811..73433495 |
Genome context |
|
Sequence |
000001 ATAGTTGGCT GTATTTCTGG GTTCTCTATT CTGTTCCATT GGTCTATGTG TCTACTTTTA TACCAGTACC ACGGGTACAC 000080
000081 TAAAATCTCA GACTTCACCA CTATACAATT CATCCATGTA ACCAAAAACC ACTTTTACCC CAAAAGTTAC TGAAATAAGT 000160 000161 ATTTTTAAAG ATTTTAAAAA ATAGAGAGGA AAGAGGAGGC TATGAAATTC CATAATGGAG TTACAGATGC TTGACATAAT 000240 000241 TTAGTGGATA TTGGATTTAG AAGCTTACAT GAATGAGGCA AACCTGAGAT CTGTGATATT TGTAAATGAA GATAGGAGTG 000320 000321 AACTTACTGC CCTTAGGAGT GGAGGGAGGG AAGGAAGGGA GAAAATGAGA GATGCCATAA AATCTATTAC TTCAATGGAT 000400 000401 TTGAAGTAAT CCTTTGAAGC AGGCAGTGAG ACTTACTTCA TAAATCCATA CCTTTTTAAT GTGGATTGGA GAGAAGTTGT 000480 000481 TGCGCTGTAA TACCTCTGTT GCTACTGTGA GAGTCATTGC CAGCCACTAT TCTCATGTCA AGCTGCCCTT GAGGAGGTTT 000560 000561 CTCTTGACCC AATTTAGAAA CAACCCAAAA CAAGGTTTGT AACTTAGAGG AATTCTTTGA TTCTGTGACA AGGGGTCTGT 000640 000641 GACCCTCTTA AAGGGATCAA GTACACAGGA GATAGTACAA GTAGTACTAA ATAGCCAGCT TAAAAAATTG GATAGGTGAG 000720 000721 ATGAGACAGG AACAGTGGAC AGAATGGCTC TAGGCATCCC CAAACACCAC ATCTGGGATA AGGAAATAGT ACAATGGAAA 000800 000801 GTCTATCCTT GGACCTACTA TTTGTCATTC CCCATGGCAT GATGGAATAT CTAAAATAAA AAGAGTTGCT TTGGAGAAGG 000880 000881 ATTGCAAAAT ATTATTTCAT AGAAGAGATT TAGAAGAGGG GAAACTCCCA ATTACATAAG GTGGGCATTA TAGCTTCTCA 000960 000961 AAACATTGGT TCCCTATATG GGTCATGAAG ATTGATCCCA GTATCAGCCT ATGGCTTACT AGGCCAGTTT AACTGAAAGA 001040 001041 TTTAATGAGC TTGGAAGGAT GCTGCCACCT GCACTCTCAC TTTGGCGGGT GTTTATCACC AGTGAGTGCG GTCCCTAAAG 001120 001121 GAGCAAAAGG ACAATAAGCA CCCAGTGGAC AACAGTGTGG CATTTTGAGT GAAGATAGCA ACTGAAAAGG TCATCGGCTT 001200 001201 GGCTAGATTG GGCTGGGCTT GTTTTTTAAA AATAAAAAAA AAGTTTTCCT TCATGATAAA AGTAACAGGT GATCATTGTT 001280 001281 AAAAAATAAA GTATGAATTA AAAAGTAAAT AATATGTATA ATTTTATAAG CCAGAAAACT AATTTGTAAT ATTCAGGTGT 001360 001361 ATGTCCTTTC ATTCTTTTTA AAAATTATGT ATATAACACA GTTTTATAAC AAAATTGACA TCATATTGTA TATATCATTT 001440 001441 TATTATCTAA TTTTTTCATT TGAAAATTCA CAAGCATATT TCCATGTTAT TGTTCTTTGA AAAATACAAT ATTAAGTGCT 001520 001521 CCATAATATC TTATGGATTT AACAAAGTTT ATTTAGATGA TGTCATGTTA TTGGACATTT TGATTATTAC CAAGTTTGCG 001600 001601 TATAAAATTT AAATGTAATG AACATCATTG TACATTAACC TTTATGCACA TCTGGAATTA TTTCTTTAGA ATAAGGTTCC 001680 001681 AGAATTAAAA TTATTTAGTT TGGATGATGA GAGCATTTAT TAGAGCATCT GACAGGTGAT GCTGAATTTT CCTCAATACA 001760 001761 GTTGTGCAAA TTGCATTCCC ACCAGTAGTG TATAAATGTG AATATCCCTC CATATATTCA TCAAAACATG GCCTTTCTAA 001840 001841 TTTTGTAAAT CTCTGCTAAT TTAATAGGTA AAAATATACC TTTGTTGCTT TAAAATTTTT ATTTCTAATT TACACACAGT 001920 001921 AAAATTCACT CTTTTTAGTA TATGGTTCTA TGGGTTTTGA CAAATGCACA GTCATGTATC TTCTACACTA GTACCATACA 002000 002001 GAGAAGTTCT GTCACTTTAA TAATTTCTCT TGGTGGCTCT TTTTGTATTC AACCCCTTAC CCCATACTCA ATCTCTGGAA 002080 002081 ACCATCAATT TATTCTTCAT CCCTATGGTT TTGCCTTTTC CAGAAGGTCA TATAAGTGGA ATCAAGCAAT ATGTAGCCCT 002160 002161 TTTGGTCTGG CTTCTTTCAC TTAGTAAAAC GCAGTCAAGA TTCTCCCATG TTTTGTGGAT AATTATTTCA TTCCTTTTTA 002240 002241 TCACTGAGTA GTACTTCATT GTGTGGATGT ACCACAGTTT TATTATCCAT TCACTAACTG ATGAACTTGT AAGATGTTTC 002320 002321 TAGTTTTGGT GAATATGAAC AAATTTGCTA TAAACTTTCA GGTATAAGTT TTGTGTGATA AATGCTCATT TTTATAGGGT 002400 002401 AAATGCTTTG GAGTGGGAAT GAGTGCCAGA CTGTTTTCTA AAGTTTCCCT AGCATTTTGC ATTCCAATTA CAAATATGTG 002480 002481 AGAGTTCCAG TAGCTTTGTA TCTTTACCAG TATTTAGTAA TTTTGTATTA TACATATATA TGTATGTAAA TATATATATA 002560 002561 TATTCATTTA AATTTTAATC ATTGTTAGAA TTTGTAATTC CCCAATGATA TATGGTATTA TCTTTTATTT GTTTATAATT 002640 002641 GACACATAAT TATTTATGGG ATACATTGTG ATGTTTCAGT ACATGTGTAC ATTGTATAAT GATCAAATCA GGATATCACC 002720 002721 TCAAACCTTA TGATGATCTT ACAGTTAAAG ATGATATATT CTTGCAAAGT GTCTGTTCAG ATCTTTTGCT CCCCTTTTTT 002800 002801 ATTGGATTAT TCCTTTTCTT ACTGTTTTTA TATGTTTTTT AATATATTGA TACAAATCCT TTGTCAGATA CATTATTTGG 002880 002881 AAATAGATTT TCCTAGTCTG TGACTTGTCT TTTCATTCTT TGAACACTGA CTTTTTTAGA GCAAAAATTT TAATTTTGAT 002960 002961 ACAATTCACT TTATCAATTT TTTTACTTTT GATGTGCAAT GTAAGAACAC TTGTTTAACC CAATGTCATG AAGATTATAT 003040 003041 ATTATTTTCA TCCAGGAATT TTATAGTTTT AAGTTTTACA TTTATATTTA TGATACTTTT TGAATAAAGG TTTGTATAAA 003120 003121 GTTTAAAAAA AAAAAAAAAA AAAAAAAA |
Predicted Small Protein
Name | NONHSAT137610_smProtein_2729:2902 |
Length | 58 |
Molecular weight | 6906.3234 |
Aromaticity | 0.210526315789 |
Instability index | 83.2247368421 |
Isoelectric point | 5.36138916016 |
Runs | 10 |
Runs residual | 0.0214912280702 |
Runs probability | 0.035532591415 |
Amino acid sequence | MMILQLKMIYSCKVSVQIFCSPFLLDYSFSYCFYMFFNILIQILCQIHYLEIDFPSL |
Secondary structure | LLHHHHHHHHLLLEEEEEEELLHHHLLLHHHHHHHHHHHHHHHHHHHHHHEELLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTToooooooooooo |