NONHSAT136148
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT136148 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1184 nt |
Genomic location |
chrX-:4555241..4561613 |
Exon number |
3 |
Exons |
4555241..4556230,4558263..4558391,4561549..4561613 |
Genome context |
|
Sequence |
000001 GCGTGAGCCA CCACACCCAG GCTTGTTTTT TTTAAGTCAT TGACAGCAGC TTCCCAGACA GACTTATAGT AGAAAACATT 000080
000081 CTTTCATTTA AAAAGAAAGA AAGCATGCCT CCATCTTCAG GGAATCTTCA TTTATTTTTA CTTTATCTTT AAAGACAATA 000160 000161 TATTGTTTTG AAAGAAGGTT TTGAAGAAAC AACATCATAG CTTGGGGCTC TGCATGACTC TGTGGAACTG AGACAGCCAC 000240 000241 CAACTCAGAA ATGGAAGACA AACAAATTCT TTCTTTTAGA GCTTTTGGTT TTTAGACTTT CATATTTCAG CATCTTAACC 000320 000321 TTTTGGCTAA ATAATGCAGC CTGAGTTATT TGTTTTTCCA CGTCTTTCTT TATGAAAAGT CTGCCCATTT AACCAAGCCA 000400 000401 TTCAAAAATA TATAAATTTG AAGGCATTTT CATTCTTATA TATTTTTAAT GGGAAAATAT ACAATTTTAT TATTTTCCAA 000480 000481 ACATTTCCCT TGTAGTATGA TGTTTCCTTA AAGGTGAAGT TGTCCCCTGG AAAGGCCTGC TAGAGGCAAG TAAGGTAACA 000560 000561 TTAATGTTTT TTCATGCTTG CTAATAAATG TATGTAAAGT TTTTCTTTCA AGTTTTTTGC ACTTATTTTT CAAATAAGTG 000640 000641 TACATTTCAT TAAATGGCAA CCACGAAATA CAGAGAAGAT CGTCAAACTA AAGTCAGAGA AACTGCTTCT ATTGCTATTC 000720 000721 CTTAAGACTT TTGGCTAATT AATAAATGTC TTTGATTCAT ATATATGTAT GTATGGAAAG GGGGTATGAA TTGAAATAAA 000800 000801 ATAATGTTAC AAATAATTTA AAAATCTGAA GTATATGCAT AATAAATACT GAACTTATTT TTTACCAGCT TGGGGATTCA 000880 000881 GCTACTCTAA AATAACATTA AGAATGTTTT GCTGTACTAT CTTCACAAAA AGTAAAGTCA ACTAAATGAT GTTCTGTTCC 000960 000961 CAACTCAGCA GTTAAATATT TGTTTAAGAA ACATGGAGGA GAAACAGAAA GATGTATTGG AAAGTTATGC GTCTGAAACT 001040 001041 AAATTATCAA GCCTCCAAGT CTTTTCCACA AACTGGTAAG TAACTTATTT TCAGTATGAC AAACAGATAT TTTTGTCAAA 001120 001121 TTTTTAATTA TAAATAAAAA GATACATGTG AATTCCTGCC TAGTAGTTTT CTTTTAATTT TTAT |
Predicted Small Protein
Name | NONHSAT136148_smProtein_992:1078 |
Length | 29 |
Molecular weight | 3278.5965 |
Aromaticity | 0.107142857143 |
Instability index | 55.6678571429 |
Isoelectric point | 4.58428955078 |
Runs | 6 |
Runs residual | 0.0110663983903 |
Runs probability | 0.0237590531709 |
Amino acid sequence | MEEKQKDVLESYASETKLSSLQVFSTNW |
Secondary structure | LHHHHHHHHHHHHHHLLHHHHHEEELLL |
PRMN | - |
PiMo | - |