NONHSAT135710
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT135710 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
2287 nt |
Genomic location |
chr9-:140119268..140122067 |
Exon number |
3 |
Exons |
140119268..140120066,140120149..140120871,140121303..140122067 |
Genome context |
|
Sequence |
000001 GTGGGCAGCT CCTGGCTGCT CTGCCCGTCT GCAGCCTCCA GGCCACCCTG GGAGGCCCAG GTTCCGGGAG GTATGATCAG 000080
000081 TGTGTCCACA CCAGACTGCA GGCAGAGCAG AGTTGAGGGA CCAAGAAGGG TTGGGACAGG TGGGCAGGAC CCCAGAACCA 000160 000161 CTCACAGCCC CGCTGGGTGG AAGCAAATGG CCCCTCCTCA CCCCTGCCCA CCTTCTTGGC AGTCTGCCCC CAGGACTGGT 000240 000241 CAGACAAGTT CTCGTGGCTG GCCTGGGTGT GGTCACCCTC TGGTGGGGGC CAGCAACGGG GCAAGGCGGG GAGCCTGGCA 000320 000321 CGCTAAGTCC TGGCACAGGG TCAGGGCAGT GACCCATCTG TCCCACGCCT GGAGACCTCT GCATGCCACG CGCCTGCCCT 000400 000401 GCCCTGCTGT GGAGCTGGTC ACCATGCGTC AGGGAAGGGC TGGCATGGCG TGAGGACCCG TCTGTCCTGC GTGGCCAGCT 000480 000481 CGGCTGCCAC CTCCTCGCCT TGTCTCTGCC CTGCCCGGAA CACCAGGGCG CCCCAAGCTG GCCTCAATGC TCACTCCCTG 000560 000561 CCTGGCATCC TGGCTTACAG TGGTGAGGCA GTACCTGCGC AGAGCAGCCT AGCGCCTGGT GCTCAGCCCC AGAGAGGCCC 000640 000641 CCACCCTGCT CAGCAGACCA GGAGACGGCC CAGCACCCAC GGCCCCAGCC TCCTCCTGCC TCATCCTCAA GGCCTGGTCC 000720 000721 AGGCCACCTC CTCCCGGAAG CCCAGGCCCC GAGGCAGGAC AGGAGTGTCC ACAGTGACTG TGTGTGTGTG TTCTCGGGTC 000800 000801 CACATAAAGG GGCAGATGCC CTGTGTCCAG CTACAACCCC CTCCCAAAGG AGCCTGCAGC AAAGAAGAAT TGCTGGGAGG 000880 000881 AAGATCACCC TGCTTTATTG CCTGGGCCTT AAGGTAATCA GGGGTGTCCC TCTCCAGCCA GGACCTGGGA TTCCGTTTCA 000960 000961 GGAGCTCGGG CTGAACGGCC ACCTTCCTGG TGGGTCTGAG CCCCAGTGCC TGGTGTGAAG GGGCAGACGC CCATGACAAC 001040 001041 AGCCACCCCG CATGTCCCGG CATGTCCCGG CACTGTGTGA GCCACATTTG CTGAAGTCTG GGTCCTGGCC CTGGCAGGGT 001120 001121 GGGCTGGGCT AGGAGATGAC Acagcagcag cagctgtggc agcggcagaa gggggggcag tggcagcagt ggcagcaggg 001200 001201 gcagcagcag cagTGGTGGG CGATGTCATC CCCGCGCCCC GCGGGCGGAG GGCCAGCGTA GGTCAGTCCG GCCTGGCGCT 001280 001281 GACTGCTGCT GTAGGGGTTG CCAGGCTGCT GCCAGGCCTG CTGGTTCTGG ATGGGGGCAG CCCCCTGGTT ACCCTTGGCG 001360 001361 CCCTTGGGCC CTGGGACCTC GGTCGGCTGC AAGAGGTGGG TTGGCTCTGG GGCACAGGGC CCCACTGGCA GGGGCTGCAT 001440 001441 CTCCGAGGAT GAGGAACAGG TGGAAGCCAC CTCTAACTGC TGCCCCAGCC TGCAGGGGTG GGCAGAGAAG ACAGACATGA 001520 001521 ACTCAGTGGA GTGGGATGGC TGCCCACGAG CCTGCGGCCC AGGAAAGCCC CCACCAGGAG CAGCGTGCCT CGTCCAAGCT 001600 001601 CAGCATCCCC AAGGCATCAG TGCCGGGGTG CCATCACCTC CAAATGTGTG TGCAAGGCTA GTGTCATGGG TGTGAGCCAA 001680 001681 GTGTGAGCAA GCAGCAAGGG CCGGTGTCTC CCAGCTGCCA CCCCTGCCAG GGATCCTCCC CCTCCCCTGG TGGCATTGGT 001760 001761 CCTGGGATGG AGCTGGGAAT GGGGTCGGGG AGGCTGAGAG ATGGGAGAGA AGGGGGCTGA CCCTGCAGTG CCCCTGAGTT 001840 001841 CAGGGCAGTC CCGGCGGCCA AGGGCTTACC TGTGGTGGCA ACACGGCAGT CTGTCCTCTC GGTCTTCTGA GCTCTAGGTC 001920 001921 CCAGTGCCTG AGTTGAGCGA CTGGCAGCCG CCTTTTCCCT CCTTGGGAGG GGCGGGGCCA TGGGGCGGGG CTCAGAGATG 002000 002001 GGGTTCCCAA GATCCCAAGA GGCCCCAGCA ACTGGAGCAC GACAGCTGGC CCAGCCCTCG TCCTCAGGTG GGTGGCAGCC 002080 002081 CAGGCCTGGG CTCTGAGGGG CACTGCCAAA CCAGTGACTC AGCCCCTCAC ATCCGGGGCA TGGCCTGGGC CCTAAAGGGC 002160 002161 ATCTGCAGCT TGCCTGAGAG GAGGGCAGGA GGTGAGCCTG AGGTCACGGC TCTGGAAAGG AAGTGGGGTG AGGCCCTCAG 002240 002241 ATTCCCGGGC CTGCAGTCCC CAGCCATTGC TCACACACCT CAAAGCC |
Predicted Small Protein
Name | NONHSAT135710_smProtein_1535:1660 |
Length | 42 |
Molecular weight | 4377.9207 |
Aromaticity | 0.0 |
Instability index | 70.2829268293 |
Isoelectric point | 6.88702392578 |
Runs | 7 |
Runs residual | 0.00523716893611 |
Runs probability | 0.0446034269564 |
Amino acid sequence | MAAHEPAAQESPHQEQRASSKLSIPKASVPGCHHLQMCVQG |
Secondary structure | LLLLLHHHLLLHHHHHHHLLLLLLLLLLLLLLLLLLEEEEL |
PRMN | - |
PiMo | - |