NONHSAT134867

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT134867

Source

NONCODE4.0

Same with

,

Classification

sense

Length

741 nt

Genomic location

chr9-:130683160..130684190

Exon number

2

Exons

130683160..130683361,130683652..130684190

Genome context

Sequence
000001 CCACTGTCAG CCCGGCTCGC TACGCCCGTC GCCTCTGCCA GTGGGTGGAG GCGCACACGG AGTGACGGGC GCCCGGCCCC 000080
000081 ACTCTCCGGA TCTGGACGAT GGGCTCACGC CAGGAACGCC GGTTCCCCCG GGCCCGGGCA TCTCGCCTGC GCTTCCTCCT 000160
000161 GATGGTCGCC AGAGGGCAGC ATCCCCTAAC TAATACCGTA ACCGCGCAGT CCCGTTTGAC GGTGGTGCCg tgcccagcat 000240
000241 cgtgccaagg actcccctac tttagctcat ttaatcctca aaaaatgcta ttattctctt tttacagacc atgaaatgga 000320
000321 ggctcagggg gtgaagggac tgatcaagat cattcagcaa taaatgctgg aaccaggact caaccatggc ttttggattc 000400
000401 cggagcctgt attcttAACC ACCAGCTCCT GCAGCTTGGT CCTCATGATC TGGGCAAGGG GGGAGGCTGA AGGCTGcagc 000480
000481 cctcttgtca tccagatggg gaaactgagg cccagagact ttaaggggcg taagcacggG AAACTCCAGC CTGGCCTCTG 000560
000561 ACCCCAGTTC AATCCGACCA TGCCCAAGCC CAAGCGGGCC TTTCCTCCAG AACTGCTCCG GGGCctggct gtgtgactgg 000640
000641 agcaaggtgc taaacctctc tgtgcctcgc tggtctaatc tgtaaaatga aggaatggaa acagacctca ttaactcatt 000720
000721 aaatatttgt tgagcacctg c
[back to top]

Predicted Small Protein

Name NONHSAT134867_smProtein_98:313
Length 72
Molecular weight 8174.5034
Aromaticity 0.112676056338
Instability index 63.7846478873
Isoelectric point 11.8323364258
Runs 7
Runs residual 0.0499629355078
Runs probability 0.0491584020996
Amino acid sequence MGSRQERRFPRARASRLRFLLMVARGQHPLTNTVTAQSRLTVVPCPASCQGLPYFSSFNP
QKMLLFSFYRP
Secondary structure LLLLLLLLLLHHHHHHHHHHHHHHLLLLLLLLEEEEEEEEEEELLLLLLLLLLLLLLLLL
LEEEEEEEELL
PRMN -
PiMo -