NONHSAT134388
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT134388 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
2437 nt |
Genomic location |
chr9+:117374792..117377101 |
Exon number |
1 |
Exons |
117374792..117377101 |
Genome context |
|
Sequence |
000001 GACATATGAT AGGCATCTGC CCTTGAGGTC TTGCCAGCAC CCCTCCTGCC CTCTGCAGCT TCCTGGTTGA ATGAGGGGCT 000080
000081 GCAAGGTGAC CACACAGGCT GCCCTGATGG GCATGTCCTG GCCTCTGGTC CATATCCCTT TCTGCTTGGC ACTGGCCTCT 000160 000161 CTTGGCTCTC ACCTCCACCT TTGCCAAGCC CAGGAGCCTC CTTCCTCCAG GAAGCCTTCC GGAGAACCCT TCCCCCACCC 000240 000241 CAACCAAGGT GCTCCCTCTC ACTGCCTTGT TGCAATTGTT TGTTTTGTAA TTGTCTTTCC CTGAGTTTGT CTTTCCTACC 000320 000321 AGATGGTGAT CCCTAGCAGG GAGGGCTGAG TAGGAACTTC AGATTTTATT TCCAGTTTCG TGCTCAAGAT AGCACAGGGC 000400 000401 CTGGCCTGAG AAGGTGCTTA GGAAATGTCT GTGGAGTAAA AATGATGGCA GCTATATTTC TTCAATGATT CCTACTTGCC 000480 000481 CAGTGCTATT TTGAGTGATT TACATGTGTG AACTCTTTAA ACCTCACAAC CACCTGAAGT TACTGTCGTT ATCCACACTT 000560 000561 ACATGTAAGG AAACTGAGGC AGAGAAGTAA CTTACTCAAG GTTACACAGG TGAGAAGCGG CAGGACAGGG CCGGTTACTT 000640 000641 TTAGCTATTA CAGGAAACAG CCTCCAGGTG AATGGAATAA AGCCTGCTGA TTAGTACTTT GTGAGAGGCT GATGGGGCCA 000720 000721 AGTAGAGTGC TGTGGTTTCT TCTGAAAGAC ATTGCCTCAT GGTGGGATTT TGCAACAAAT GGAACCTTCC ACGCAGTCTG 000800 000801 AAAGGCTACC TGTGCAACTC CAGCCTGGGC ATGGTCCCTC GTGGCTGCTC GGTCCCCCAG GCCTTTTTGA GACTCTAGTA 000880 000881 CAGCTTCTCT GGGCTGTAGG CCCCTAGCTA CGATGTCCCT TCGTTTCTTG TCTGGAACAT GGATCTCAGA ATTATATCTG 000960 000961 CCTCAGGGGC CTAAGAGATG ATCAAATGAA GGAGGGAAGG GCTTCAGTGA TTATCAAGTG CAGGGCAGAG ATCCTTGTGG 001040 001041 CTATTTTTGT TGGTACAGGA AGAAAGTAAG GCGTGATGAG AGTGAGAAAC ACTTAGCATA TTTAGGAGAG TCTCCTGCTG 001120 001121 TGGGCCAGGT GAGGAGGAGA AGGCCCCTGC CATCCCCAGA GTAGCATCTC AGGGCTGACT TGCATTTGTT GCTTGATCTT 001200 001201 GCCTGGGAAA TGCAGTCTCC CTTGACTCAC TCTTTTTTGT TTTGTTTTGT TTTGTTTTGT AAGGGTGATT TCATGAACAT 001280 001281 TCTCAGAGAC AGTCACACTA GAGTGCAGAG GGGCAAGGGC ATGGAAATTA TGGGCTTGGA CCCTGGAGCC AGATGGCTTG 001360 001361 GGTTTATCTC CTGGCTCCAT GGCTGGTAGC ATAGCCTCCC AACCTTGGGC AAGTCACTTT ATATCTTGGA CCTGCGGTTT 001440 001441 TTTCTCCTGT AAAATAGGAA AATCATGTTG AGGAAAGGGG CCTGTCTGGT GAGCAGAGTA CTGGATATTA TGCTTGCATT 001520 001521 TCCTTCTGTT ACATCCCCAC AGCAGCTATA GGAGGTAGAC CTCTCTATCC CCATTTTACA GATGAGAACA GCAAGGTTCG 001600 001601 GGTTGTTAAG TACCTTGACA GCTAATGTCA AAGAGCATGT ATGTGGCAGA GTGGGAATTT AAGTCCAGGT TTTCTGGCTC 001680 001681 TAAAGTCTTC AATGTTTTCA TAGTTGCTGC TTTGTAGCCT TAGAGCCCAG TGCAGGGCAG ATACATGATA ATTGTTAAAG 001760 001761 GCTTGTCTTT TACATAGTCT TGGTTGGGAG AGGGGGCTCC TAAGTGATCT TCCAGAGCTG AAAATCGGGG CCAGCTTCAG 001840 001841 GTGCATGCAA TCTGTGCAGT CACACAGGGT CCCCCACTTA GGAAGCCCCT CCCATTTGGT TTAATGCTGT GCTGTCGCCA 001920 001921 TCTTGAAATT CTTCATTATT TTTGTAGAAG AGGCCCCACA TTTTCATTTC GCATTGGGCC CATTCTGTAG CTGCTGCTGT 002000 002001 TTAAAGTATT GAGAGAAGTG AAAAATGGTG AGGGCATGAG AGCCCTGTTC CCCCTCTAGG GGGCCTGATC AGTGGCCATC 002080 002081 AGCCCTTGGG CCAGCTTGGA ATCATGAAGA TGTGTGCTGA CTGGCCACTT CATATCTTCA CAAACATCTA GAACCATGGC 002160 002161 AGCAAAAGAC GATTCTAGTA GACCTTTCAC CAAGATGGTT AGTTAGCAGG GCTGGTGTGT CATCCCAGGG GACTTAAGCC 002240 002241 TGATTTTCCT TGGTGAGGGG TGATTTTCAG GCCTGCTGGA GGACACATAA CAGAGGTAAA TGTGCAGGTG CCTTGTAATC 002320 002321 CCAGCTATTT GGGAGGCTGA GGCACGAGAA TTGCTTAAAT CCAGGAGGCG GAGGTTGCAG TGAGCCAAGA TTGTGCCACT 002400 002401 GCATTCCAGC CTAGGCAACA GAGCGAGACA ATGTGTC |
Predicted Small Protein
Name | NONHSAT134388_smProtein_758:877 |
Length | 40 |
Molecular weight | 4344.1819 |
Aromaticity | 0.102564102564 |
Instability index | 45.1256410256 |
Isoelectric point | 9.89385986328 |
Runs | 8 |
Runs residual | 0.0363876319759 |
Runs probability | 0.0375044161809 |
Amino acid sequence | MVGFCNKWNLPRSLKGYLCNSSLGMVPRGCSVPQAFLRL |
Secondary structure | LLLEELLLLLLHHHHHHEELLLLLLLLLLLLLHHHHHLL |
PRMN | - |
PiMo | - |