NONHSAT133442
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT133442 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
740 nt |
Genomic location |
chr9+:99489012..99489751 |
Exon number |
1 |
Exons |
99489012..99489751 |
Genome context |
|
Sequence |
000001 CTCAAGTGCA TTCGCAAGTG GAGCAGTGCT AAGCAATTTC AGAGCAAGAT TATAAAGTCC TGCCTAGATT GCCAGATCAC 000080
000081 ATCTAACTTT GTCATTCCAA GTGAGTCCTG GGTGGAGAAA GAAGAGAAGC AGAAACTCAT TCAGAAATAC AAGGAGGCAT 000160 000161 TGAGCAACAA GGCTTGCAGG TATTTTGATG AAGGACGTGG GAGCTGCCCA TTTGGAAGGA ATTGTTTTTA CAAGCATGCG 000240 000241 TACCCTGATG GCCTTACAGA GAAGCCACAG AGACAGAAAG TGGGAACATC AAGCAGAAAC TGGGTCCAAT GAAGGAACCA 000320 000321 CTTCTGAGAA CTCACTGAGG AAAGAGATAG CAGCAACCCT TTTGACAATG ATGAAGAGGT TGTCACCTCT TGAGGTGGGC 000400 000401 GAGATGTTGC TTATGCTTTT GGCTGCAGGT GGGGATGATG AACTGGCAGA CTCTGAAGAT GAGTGGGACT TGTTTCATGA 000480 000481 TGAGCTGGAA GATTTTTATG ATTTGGATCT ATAGCAACCT TGTGTGGCGT GTGAACTGGT CTGCTGACCC CAGACAGCAG 000560 000561 CTGTCCCCTG TGCTGGTGTG GCAGTGCCTG TGTTCTCTCC TAGGTAGGCC TATCAACTCC AGGTGTTGTA AAAATTTTTA 000640 000641 CCCAGGGCCT GTCTTCTCAA CCCTTCACCT TTCCCCGAGG AGTGTGTTAT TTTCCCTGTT GAAAACAGTT AAAACTTAAA 000720 000721 GTTAGTTTTT TGTAACACAA |
Predicted Small Protein
Name | NONHSAT133442_smProtein_434:718 |
Length | 95 |
Molecular weight | 11050.1585 |
Aromaticity | 0.13829787234 |
Instability index | 44.2107446809 |
Isoelectric point | 9.98162841797 |
Runs | 14 |
Runs residual | 0.0201202590194 |
Runs probability | 0.0409695409695 |
Amino acid sequence | MMNWQTLKMSGTCFMMSWKIFMIWIYSNLVWRVNWSADPRQQLSPVLVWQCLCSLLGRPI NSRCCKNFYPGPVFSTLHLSPRSVLFSLLKTVKT |
Secondary structure | LLLLEEELLLLEEEHHHHHHHHHHHHHLLEEEEEELLLLLLLLLHHHHHHHHHHHHLLLL LLLLLLLLLLLLEEEEEELLLHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |