NONHSAT129265

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT129265

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

6272 nt

Genomic location

chr8-:135804263..135810515

Exon number

1

Exons

135804263..135810515

Genome context

Sequence
000001 ATATGTTCTG AAATTAAACT TGAACTTTTT TCTGTGAATT TTGAAGATTT GGTATCTTAT AATTATTTGG TGAGCATTTG 000080
000081 GCATGAATTA TTTAGCTTCT CCCCTGTTTA TGATTTATTT CTCTTGTCAT CGATTTCCAA TAGGAAAATG TTATGGTTCT 000160
000161 AAATGTCTCC TGTAGACTTC AGTAATTGAA AAATGTCAGT CAAGATGGGG GGAATCTGTA ATATATAATA GAGTTTATCT 000240
000241 TTTAGTTATG TTCATTTCCA CTTTTTTTAA TGTGTTTTTT TTTTAGTAAA TGTCAAAAGT GTTACTCAGT GCAACATATT 000320
000321 ATGCAATATT ATAATCAACT AACCTCTTCA TTGATAATGA CTTCATATTG AGAGGCTTTT TAAATCTAGA AATATTCTTG 000400
000401 TTTTAAATTC CAGGTTAAAA TGTAAAGGTA TTTTTATTTT TTTTAATTTT AATTCTTCTC AAAGCTACTA GTACATTATA 000480
000481 AAACAACAAT TTCACATTTA GAATTTTTAT ATGTATATAA ATTAGGATTA TTTTTTAATA TTAGCCTTAA CTTTCTTTAA 000560
000561 CTTTTATGAA AAACAACTAG TCCCAAGGGT ATTTTTACTA TTTAATATAC ATTATTCCTG TGATTCAAAA TCTTAGCAGT 000640
000641 AGAACCTGTT GAGCTACTTA ACTTTCTGTC TTGGGACTAT CCAGGTGCAG TCATAACTGG TTTCAAAGTT GTGACCTTTT 000720
000721 CCTTGCTGGT TTCAAAATCA TTCCTTAAAA AATGTTCAGT ATTTTTCTTT TGTCAAAAAA TAAAAACAGG ATTTGTGGGT 000800
000801 TGTTCTGTTT TTTAAAATTA GTTTGAGAAA CTTCCTTTGC CACTTGTTTT CTGTGCAAAT GTTGTAAGAG CTCAAATTCC 000880
000881 CTGGGGGTAG GGAGGACTTT TATAAGGTTT TTTTGGTTGA AGGGTATAAA AGGCACTTAA AAGGTATACA GTTACTTTTA 000960
000961 TTTCGATATC CCAGTCATTT TGACATTATG ATAGGCTTTC CCCACTTTAT AGGTTATCTG AAAATTTGGT GGGGGGCGGG 001040
001041 TATTTTATTT ATCCTTAATA TAACAAAATT ATTTTCCTAT GTGTAGTCAA TAGCACATAC AAAAAATTAT CTCCTGTTTG 001120
001121 TAGTCAGTAG CACAGTCAGT ATTCACCAAA ATACTGAGTT ATTTTTCAAG TAAAGGTATA AGTATGAATG AGAAACAGTT 001200
001201 TGTGGGTTGG GTATTGTCAG TCCTTCTTTT TCAGATAACT TTCTAAATGG TCATTCAATC TGTAATCTTA AACTTTTTTA 001280
001281 ATGTTATAAA TTCTTCAAAT CAGTATTTGT ATTAAATGCA GTGACCAGAC TATGTCACTG ATACAATGTC ATGATTAGAT 001360
001361 GTGCAGAAGA CTATGTTACA TGGGTGATAA ATGAACTTTT AACATATAGA AATTAATATC AGATTAAACT AAAACATTAA 001440
001441 GCAAAGTTAA TACATGCTTG CATACATATA TATATTTATT TATTAATGAT ATGTGGAGAA TCTTTGTGCT TCATAGTCAC 001520
001521 TAGACCTAAA GTAGAAGCAG TTGTCAAGAA TGTCCAACTG CTATTCATCT TTGTGGCCAA AGTAAATTTC AGATTTTTTT 001600
001601 TTTGTAATGG TTTTCTTTAG TCTCTTTATT AACCCATCAT CATGACAAGT CTGTCAAGTG ACACATGTGA AAAGCAGATG 001680
001681 TCCTTTCTTA TTCCTGGTGC TTCCTAAGGA GGCAGTGCAA TGCAGGAGAA GGAACATTAT TAGAGATAAA GGAAAAAACC 001760
001761 AGAAGTGCTT TCTCCTCTCA CATTCCACTC AACACTTCTC TCACCAAATG TGTGTGGGGA TTTCTCTCCA CCAACAACCA 001840
001841 GCAGTTCTTT ACTGCAGATT CTCCAGTGGA TACCAGCCAG GTGTCCTCTA ATTCAGTTCA ATTCTGACAT TATCTACTGG 001920
001921 GAGATAGTGT CAGATCCCGC AAGTGGAGGG CTCAGTCCTA CAAGACTACC CCTTACTTCA GATGTCAGTC ACAAGCAGTT 002000
002001 AGCGGTTTGT GATTCTGACC AACTGGCTAG AGGTCCCCCT CCTCAAGTGT GATTAATTTG CTAGAGCAGC TCACAGAATT 002080
002081 CAGGGAAACA CTTTATTTAC ATTTACCCAT TTATTATAAA GGATATTATG AAGGATACAC ATGAACTGCC AGAAAGACAA 002160
002161 GGAGCATAGG CAAGATACTG AGAAGGGTCA CGGAGCTTCT GTGCCTTCTC CAGGTGCACC ACCCTCTGGG AATAGTCAGT 002240
002241 TCATGTGTTC AGCTGTCTCG AAGCTCATTC GAACCCTGTC CTTCTGAGTT TCTGTGGAGG CTTCATTACG TTAAGGTTCA 002320
002321 GAAATCAATA CCCCAAAATA TGGGGCTTTG ACATGCTGAA TTAAAGAAGC AGCCTCAAGG CCTCTTGGCC TTCTCCAGCT 002400
002401 CTCCTCACCC AAATCCTGTC TCTCCCAAAG CACAAGATGA GGCTGTTCAC CAAAGTTCCC TTATTTACCT AGAAACTGGA 002480
002481 CCTTAAAGAG GAACACAGTT GCCTGCGATT CCATCCCTGT AATTTTATTA ACCAGAGATT AAAACTTATA TCACAGAGGA 002560
002561 AGAGACTAAA AATTAAACAC CACACCTGGA GCCCAGATGA CCTGTCCCAA TCTATTATCT GTTCTCCAGT CCCATTTAGT 002640
002641 TCCCAAAGGG AATCATTTAC AAACCATTGT CTGATCTTCC GGCCCATTTA TTTACAGCTC CCCCTCTTTC CCCAATGAAA 002720
002721 ATGATACTTA AGTGTCAGCC ATCTATCGGC TCTTTGAGTT TTCACATTTT GTATGACTCC TGTGCACACA CATGCATGTA 002800
002801 ATAACTGTTA TACTTGTTAA CTTTTTTTCA TTATAGGGGT ATCCACCATG ATTATATATG ATGGGGAGGA AAGGGATTAC 002880
002881 TCCATTTCTG CCCCTGCAGT CTGTAGGCAT GATTGATTAC ATCATTGGTC GCCGGTGATT AACTCAGTCT CCAAGCCCTG 002960
002961 TCGTGTCCCT GGAGGTTGGA GGGTGGCACT GAAAGCTCCA ACCATCTCAT CATGCTTTGA TCTTTCCGAT GACCAGACCC 003040
003041 CACCCTGAAG CTATCTACGG GTCCCCAGCA ACATTCATTT CGTTATCATA CAAATGACAT TCTTACAATT TCAGAGATTC 003120
003121 CAAGGGCTTT AGGAAATGGA GATGAAGAGC AAATATATAT TTCACAATAT CACAAACATA CCCTTGGGAA TTAGACCTCT 003200
003201 GATCTAATCT AGGCTCCCTC ACTTGCCATT TTTGTGACCT TGAACAAGTT GTTCATCTTT TCTGGATAGT TCTCTGTTAA 003280
003281 AAAAATTAAA ATAAAAAAAT GGTGGCTATC AGGTTGTTAG GAGGACTAGA TAAGAGAACT ATGTGAAGGA CCCTGCACAG 003360
003361 TGCTAGCAAC AAAGTTGTTT AGTAAGTGCT ATTTCAATTT ATTTTGCTTC CAAGCTCATG TGAGCTCCCT CAGTGTGTAC 003440
003441 CACCAAATCA CATGATGTGT ATCCCAGTCA AATCTTAAAG GTCATCCACC TTGAATCTTT AAGTTAATTA ACGTGTGTTT 003520
003521 TTAAAACTGC ATTATAAGAA CGTTAGGGTT TTTGTTTTGA TCCTATGGAA GTTAAATTTT TTACACAAGC ATTCAACTGT 003600
003601 TTAGCTTCAA ACTGAACAGA TAAATAGTCT GTATTATTTC ATTATGTATT AAAAAATGAT TAAGCCTGCC TCAGGCAGTT 003680
003681 CAGGCAAAGC AGGTAAAAGA TTATCAAGGA GTAACATTAG AAAACACTAA TCAGAGTGCC TAAAAAGCTT TATGCGGTCC 003760
003761 AGGTTGTACA GGGATGTTGG AACAGTAAAA CAAACAAAAC ATTACAAGGT ATGAAGCGTT CGAGATAGGT AGAATAGAGC 003840
003841 AGGTTATATT AGAGAAGTCT CTTCTAAAAT TGTGTTGGCT AGCCTGGGAT TTGAACTTAT ACCGTGTATG TATGTCCATG 003920
003921 TGTAACAGGT TGAACATGCA AGAAGCAGTG TTCATAAAAG GTGGCAAACT TGTTTTACTT GTTTCTCAGT CTTTTCAGAT 004000
004001 CAGTACTTAT AAAACACTGA TATTTACAGT AAATATCTTA TATTAAATAT TAGCTAACCC TATTAAATTG TGTGTCCTTG 004080
004081 TGCTGCAGTC ATTTAATGAC CTCATTCTTT GGTAAGTTGG CATGTGATTT GAGATAGCTC TAAGTGCTAA TGGATTGTTT 004160
004161 GAAGGGGTTA AAGGCAAAAC CAGAAAGAGA AAACTATTTT TAGGAAAAAG CGATCATACA ACAGGCCTTA AATAGAAGAA 004240
004241 ATGAGATATC TCTATCTTTA CTATGTAACC TTTAATTCCT TACACATTTT GACTTCATAT TTTTTGTATG TAAATGAGAA 004320
004321 TGTTATAGTC TTGTAAATTC CTTTTCCTCT GTGACTACAT TCAGTTATTT ATTTTATTGT GTGTTTGTGC ATGTCGGTAG 004400
004401 AGCACAGTAT TTAGTAGAAT GAGTTATTGG TTAAACCACC TGGATTCATT TGTAAAATGG GGCCACCTGT CTCTTAAATT 004480
004481 GTAATGAGGA TTTGATTAGA TAATCTAGAT AAATCACTTA GCACAAGAGT CTCCAGCCCC CGGACTCTTG ACTGGTACTG 004560
004561 GTCTGTGGCC TGTTAGGCAC TGGGCTGCAC AGCAGGAGGT GAGCAGGGAG CAAGCTAGCA CTAGGGCCCA AGCTCCGCCT 004640
004641 CCTGTCGGAT CAGTGGCAGC ATTAGATACT CATAGGAGCA CAGACCCTGT TGTGAACCGT GCGTGTGAGG GATCTAGGTT 004720
004721 TCGTGCTCCT TACAAGAATC TAATTAATGC CCGATGAGTT GAGGTGGAAC AGTTTCTTCC CAAAACCGTC TCAGGAAACC 004800
004801 TGTCCCTGGT GCCAAAATTT GGGGGACCTC TGACGTAGCA CACTATCTGG CACATACCAA GCACTCAGAA AATATCCCAT 004880
004881 TTCTCAAAAC TCAGTTCCAG TGTCAAGTCT TAATAGTATA TTGATCTTGG AACTCCAAGG TAGTTGGTCC TCTCTTTGTG 004960
004961 CCATAAATGT GCCTTGTACT CAGTAGTGCT AAATTGCTAT CAACTAGTGC TAAATGTACT ACTAATTCAT CTGTGTGTCC 005040
005041 ACTTCCCTTC TTAGATTGTG AGCCCCTTGA GGACAGAGAT GGGTTTACTC ATATTTATAA ATTCATTGGC ATGATAAATA 005120
005121 TTTGCTGAAA GAATAAAATT GTATTCTTAT GTTTTAAGCA GGGTCCCCTC CACCTCTGAG TGGAAGATGG TCTGGGAGCA 005200
005201 AAGGTGACAG GTCTTCTAAA AAATCTGGCC ACATTCTCAA CCCACCACAC CCCCGCTTTT TTAAACAGCT ATTTAATTGC 005280
005281 CATTGTAATC CTAAGGATTG GATCAATTTT TCACTTCCCT TTTTCACACT TTTTTCCTTT TACTAAGAAA ATAAAGTAAT 005360
005361 AAAGTGACTG CCAAATGGAG AAAACTGTCC ACTAAATATG AATTAATAAG TGCTATTATC AGAAATTGTG TAAAAGCAAC 005440
005441 ATAATGGCAC TATAAAAAGG TATTATCTTA GAATCAAAAA CCTTGGGTTT ATATTATAGC CCTGCTACTT TCTAGTCATA 005520
005521 TGACAGTGAT CAAGCTATAT TACCTCTTTG GCTTGACAAA ATAGGGGTCA TCTCTATTTC TGGCTTGTTA TGATTGATGT 005600
005601 GAAATATTCA TACAAACTAC CACTGTGCCT GGTAAGTAGA AGACACTCAA ATATGTCTTG GAGTTACAGT TAATACTGTA 005680
005681 TCGTTTAAAT TTGAGAAAAA CCAACTTTAA AAAATCACAT AGATACAGTT GTTTACTGCT AGAAATTTTA TTTAAATTAG 005760
005761 TTGATACTCT TGGTTAGGTA ATGAAAAACA ATGGTTTTAT CTCCATTATG CTGTGATAGG GAAGAGTAAC ACAGTTCAAA 005840
005841 TGGCAAAGGC ATACCTGACA ATTAAAATGC ATAGTTAAAG GCTAATACTT CCTGAACACA AGAAGACAAG TCTCTACTTG 005920
005921 ATACTACTCT CCACAGTTAA ATCATTGATA CTTTGTGCCA TACAGTGAAA ACAGAACCAT CTAGGTGTTC ACGGATTGTA 006000
006001 TTTTTCCTTA TGAAAGGTAG AAGGTTAGAG AAAATTATTC CCAATACAAT TAATACAAAT AAAATTGGTT ATTAGGTGCC 006080
006081 TTTTAATTAG GCAGTAAGGG CATATGAAGC TTCATTACCT ATGAGAATTT TGTCAAAATT ATTTCCCAGT TACCATGTTT 006160
006161 TAAAACAGCC TCTCAGAATT CCCCACTTCT AATTTCTCCT TTCTATTCTA CCAATTTTAC TCCATACCTT TTTGCTAAAT 006240
006241 AAACATTTTC TTCCTAAAAA AAAAAAAAAA AA
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Predicted Small Protein

Name NONHSAT129265_smProtein_3911:4045
Length 45
Molecular weight 5044.0274
Aromaticity 0.113636363636
Instability index 46.2363636364
Isoelectric point 9.51531982422
Runs 9
Runs residual 0.0414438502674
Runs probability 0.042042042042
Amino acid sequence MSMCNRLNMQEAVFIKGGKLVLLVSQSFQISTYKTLIFTVNILY
Secondary structure LLHHHHLLHHHHHHHLLLEEEEEEELLEEEEEEEEEEEEEEEEL
PRMN LLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHLL
PiMo iiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTTTToo