NONHSAT129222

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT129222

Source

NONCODE4.0

Same with

,

Classification

sense

Length

507 nt

Genomic location

chr8-:134254117..134256903

Exon number

2

Exons

134254117..134254317,134256598..134256903

Genome context

Sequence
000001 cttggggaat ggagtgaaat tatctgtagg gcctagcata gtgcctggca cgtagcaagc tgcaagtgat ggttgcCACG 000080
000081 GAGACACCAG CAGCCTTGCC TGGTGGGGCT GGATTGTTCC CTACCCACGG TCCACCCTGT TCCTCCTTTG TAAggcagga 000160
000161 caaggcaggg cagggcagCG GGCGGATGGG CATCCTTTCG GAAAAAATTC ATAGAGCGCA GAGGGCCTTG GCTGTGGTGT 000240
000241 TTGGCACTAA CGAGCTTCCC TCTCTCCTAG ATGGCGGACT GTGGCGGCCT CCCGCAGATC TCCCAGCCGG CCAAGCTCGC 000320
000321 TGAGGCCTTC AAGTACTTCG TGCAGGGCAT GGGATACAGT GAGTATGGCA TTCCCCGTGT GCAGTGGGTC GGGGCATGTG 000400
000401 TCGGAATTGG AAGTGCTCTG TCCTGAGCCA GGTTTGGATG AGCAATTCTG TGTCCCCCTG GCCAGCTTCA GCTTTCTGGG 000480
000481 AGGAAACAGT TAGGTGTGTG GAGGGCA
[back to top]

Predicted Small Protein

Name NONHSAT129222_smProtein_68:322
Length 85
Molecular weight 8659.8115
Aromaticity 0.047619047619
Instability index 46.1
Isoelectric point 9.29595947266
Runs 9
Runs residual 0.0268425841674
Runs probability 0.0267326149679
Amino acid sequence MVATETPAALPGGAGLFPTHGPPCSSFVRQDKAGQGSGRMGILSEKIHRAQRALAVVFGT
NELPSLLDGGLWRPPADLPAGQAR
Secondary structure LLLLLLLLLLLLLLLLLLLLLLLLLLEEEELLLLLLLLEELLHHHHHHHHHHHHHHHHLL
LLLHHHHLLLLLLLLLLLLLLLLL
PRMN -
PiMo -