NONHSAT129102
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT129102 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
944 nt |
Genomic location |
chr8+:129611758..129838859 |
Exon number |
5 |
Exons |
129611758..129612423,129667310..129667471,129838613..129838671,129838751..129838763,129838813..129838859 |
Genome context |
|
Sequence |
000001 GTTAAAGGAA AAGTCAATTG ATGTGACAAA TTTCATTGTT GTCTTACTTT AAAAAGTTGC CACAGCCACC TTAACCTTTA 000080
000081 GCAACCACAA GTTTTATCAG TCATCAGCCA TCAACATCGA GGCAAGATAT TCCCCCCAGC AACTTACTGA AGGCTCAGAT 000160 000161 GATCATTAAC AGTTTTTAGC AATAACATTT TTAAAATTAA GATATATATT AGACATAATG CTATTGCAAA CTTAGTAGAC 000240 000241 TACAGTGTAG TGTGAACATA ACTTTTATAT ACACTAGGAA AAGAAAATGT GTGTGACTCA CTTTATTGAG ATATTTGATT 000320 000321 TATTGCAGTG GTCTGGAACT GAACCTACAA TACCTCCAAG ATATGTCTGT ATAAGGAGAA AGGGGCAAAG GATTTGAGAG 000400 000401 TTTAATGAGC ATGATCTCAA TAATGGGCTG TGGAATATAA GCTTTCCTCC TTCCTCCTGC AAATGTTTAA TGATAGCCTG 000480 000481 TGAAACATCA TGAGAATTTG GGGCTAGAGA AATGAACAGA CATGGTTCTT GCTCTGAGAA AAGAAATTAT ATTATAGTCC 000560 000561 ATTATTTCCC AAACTGTAGT CATTCAAATG TCCCATCATA TTTTTGTTAT ATCTTTGTGC TCCCTGTATT ATCATATAGT 000640 000641 GTTTTTTAAA ATTATGTACA CTTTTGATCA CAGGTATTAT TATTGGCTCA GAAGTTTCAT TTGTGGAAAA AATAAAGATT 000720 000721 CTTGGTTATA TACTGGAGTG ATGATTCACT ATGGTCTCCT GTGTTGAAAT TTGAGATCTG AGGCCGGGCG CGGTGGCTCC 000800 000801 CGCCTGTAAT CCCAGCACTT TGGGAGTGGC CGGGCTGAGG GGCTCCTCAC TTCCAGTAGG GGCGGCCGGC AGAGGCGCCC 000880 000881 CTCACCTGAC CCCCCACCTC CCTCCCGGAT GGGGCGGCTG GCCGGGCGGG GGGCTGACCC CCCC |
Predicted Small Protein
Name | NONHSAT129102_smProtein_587:766 |
Length | 60 |
Molecular weight | 7325.601 |
Aromaticity | 0.254237288136 |
Instability index | 64.7915254237 |
Isoelectric point | 8.86468505859 |
Runs | 13 |
Runs residual | 0.0758824444099 |
Runs probability | 0.0354517413341 |
Amino acid sequence | MSHHIFVISLCSLYYHIVFFKIMYTFDHRYYYWLRSFICGKNKDSWLYTGVMIHYGLLC |
Secondary structure | LLEEEEEEEELLLLEEEEEEEEEELLLLLEEEEHHHEEEELLLLLEEEELLEEEELLLL |
PRMN | LLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | oooooooTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii |