NONHSAT128589

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT128589

Source

NONCODE4.0

Same with

,

Classification

antisense,sense

Length

2016 nt

Genomic location

chr8-:125500751..125520756

Exon number

4

Exons

125500751..125500937,125506074..125507783,125516512..125516588,125520715..125520756

Genome context

Sequence
000001 GACATAATGA AAAGAAATAG AGATCGGTGT GTAGGGGGAG TGGTGCATTC ATTTGATGGT ACCAAGGAAG CAGCAGCTGC 000080
000081 TTTGATTGAC TTGGATCTTT ATATAGGATT TAATGGTTGC TCACTGAAAA CTGAAGCTAA TTTGGAAGTT TTGAAGTCAA 000160
000161 TTCCTAGTGA AAAATTAATG ATTGAGACAG GTAAGTTTGT TTTCAGAACT TTGTTTCATA TTAAACCATA CCAAACAAAA 000240
000241 AGGAAAGCTG GAGAAAGAAA TTTGACTTCA AACTTTAAGT GAACAAGTAT TTTAAAACAG CATGCTCAAC CTCAACAATT 000320
000321 ATGTTTTCCA GAAGATCTTT GGGGGTTATT AATGGAAAAA CATATGCAAA TGATTTTTTT CAATTTAGAA GTTTGCTATG 000400
000401 TCTAAGCACT TAGAAAATGA GATGCCAGAA TATAACTCAG GAGGTTGTAG TTACGAGTAC TTAGCTAAAC AAGGGGTCTT 000480
000481 GACTAAGCAC ATCACACTTC CAAGTTTCAA AATCTGTTCA GAATTTTGTT TACACAGTGT CTTTATAATG GCTTAATTCT 000560
000561 ACAGCACTTT GTACAGTGCA ACAATTTATA TTGGTTTAGT ATAAGAATTT TAGAATCCGT TGCCTCTTAA AACAAGGTGA 000640
000641 ggccgggcgc ggtggctcac gcctgtattc ccagcacttt gggaggccga ggtgggcgga tcacctgagg tcagaagttc 000720
000721 aagaccaacc tgaccaacat ggagaaacca catctctact aaaaatacaa agttatctgg gcatggtggc acatgcctgt 000800
000801 aatcctagct acttaggagg ctgtggcagg agaattgctt gaacccagga ggcagaggtt gctgtgagcc aagatcacgc 000880
000881 cattgcactc cagcctgggc aacaagggcg aaactcagtc tcaaaaaaaa aaaaaaaata caaaaaatta gctgggtgtg 000960
000961 gtggtggcac ttgcctgtag tcccagctac tcaggagcct gaggcacgag aattgtttga acccgggagg cagaggttgc 001040
001041 agtgagccga gattgtgcta ctgtactcca gccttggaga cagagtgaga ctccgtctca aaaaaaTAAT AAGGTGAAAA 001120
001121 GCTAAAACTT TTATCTAAAC CCTGTCAAGG CTCTCCTTAT ACCATGGACT TTAGGAAAGT CAAGACTGAG CCATTCTGGA 001200
001201 GAAATCACAT TCATTTCCTT GGGCAGTCAG GAAAACAAAA TATTTGATTA AAAGTACGAT GTTTGCAAAA TGTGTAATTC 001280
001281 TTTATTAAAA AATATTCAAA ACCAGTTTCA CATTCAGTAG AGATAGAAAT TTGTTTAACT TATGCAAACC TCACTACATG 001360
001361 CATAGCGAAA AAGATTTTGA AAACTGAAAA AAAAACTGTT TAACTTAAAT GTTTTCATGT TGTTATACAA TTGTATTTAA 001440
001441 GGTTTAGGTC TTTTTTTTAA AGCATGCTGC ACACCAACAA TGTTAGCAGA AAAAAGGAAT AGAAGTGAGT CTTAGAAGGT 001520
001521 ATTTAAGATG CAATTCAAGA TTTTATCTTG TGCTTTTCTT AGAACTGTTT TCTGTTGAAA TAACTGTGCC ATTTTGGAAG 001600
001601 CTGAATCACG GTTTATCATT TAGAGGTTAT ATATTAGATA ATGGTCATAA AAAATTTTTA AAAATGTAAA CCCCTTACGA 001680
001681 GACACTTTCT TTGCTTAACT AGATGCACCT TGGTGTGGAG TCAAAAGTAC ACATGCTGGA TCAAAATATA TAAGAACTGC 001760
001761 ATTTCCTACC AAAAAGAAGT GGGAAAGTGG GCACTGCTTA AAAGACAGAA ATGAACCCTG CCATATAATT CAAATATTGG 001840
001841 AGATAATGTC AGCAGTGAGA GATGAGGATC CACTGGAATT AGCCAATACA CTATATAACA ATACTATTAA AGTATTTTTT 001920
001921 CCTGGAATAT AATTGGTATA TGTCTTCCAC TTTCCATCAT GTATGTAAAA TTTCATAGTA AAACTTCCTG ATAGTTTCAA 002000
002001 TAAAGAAATT ATCTGC
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Predicted Small Protein

Name NONHSAT128589_smProtein_320:412
Length 31
Molecular weight 3472.9903
Aromaticity 0.166666666667
Instability index 65.92
Isoelectric point 10.0442504883
Runs 5
Runs residual 0.0355855855856
Runs probability 0.0473237943827
Amino acid sequence MFSRRSLGVINGKTYANDFFQFRSLLCLST
Secondary structure LLLLLEELLLLLLLLLLHHHHHHHHHHLLL
PRMN -
PiMo -