NONHSAT128379
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT128379 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
594 nt |
Genomic location |
chr8-:117670784..117768062 |
Exon number |
2 |
Exons |
117670784..117671219,117767905..117768062 |
Genome context |
|
Sequence |
000001 CTCTTTCTTC CTGTCTGCTT GGAAAGATGG CGTCCCGCAA GGAAGGTACC GGCTCTACTG CCACCTCTTC CAGCTCCACC 000080
000081 GCCGGCGCAG CAGGGAAAGG CAAAGGCAAA GGCGGCTCGG GAGATTCAGC CGTGAAGCAA GTGCAGATAG ATGGCCTTTC 000160 000161 CAATATCAGA TGGAAATGAT GCGGAGCCTT CGCCATGTAA ACATTGATCA TCTTCACGTG GGCTGGTATC AGTCCACATA 000240 000241 CTATGGCTCA TTCGTTACCC GGGCACTCCT GGACTCTCAG TTTAGTTACC AGCATGCCAT TGAAGAATCT GTCGTTCTCA 000320 000321 TTTATGGTTA GTAGGAGGTT TATTATTCTT TTTTCCCTTA ATATTATTAC TACTATTTTT GCTTTCTGTC CTTTTTGCCT 000400 000401 CTAAGAGCAG TCTGGCAGGC CTTCTCAAGT AAATACCAAC CCTGTTTCTG CAGCAGCCTC AGCAGCAGCT CAGTCTAGAC 000480 000481 AGGGTTTCCT TCTTTCTGTT TATTTTTCTT GCTATCAGAG CCCTGATGTG TACATTTTGG AATGCTGGAG TAGCTGCTTC 000560 000561 ATTTCTATTC CTCCATCTCC CCTCCCTCAT TGAA |
Predicted Small Protein
Name | NONHSAT128379_smProtein_242:403 |
Length | 54 |
Molecular weight | 6038.2406 |
Aromaticity | 0.150943396226 |
Instability index | 53.6905660377 |
Isoelectric point | 9.69256591797 |
Runs | 6 |
Runs residual | 0.0470547630005 |
Runs probability | 0.0901931343107 |
Amino acid sequence | MAHSLPGHSWTLSLVTSMPLKNLSFSFMVSRRFIILFSLNIITTIFAFCPFCL |
Secondary structure | LLLLLLLLLEEEEEEELLLLLLLLEEEEHHHHHHHHHHHHHHHHHHHHLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTToooooo |